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The map label for this gene is fhaC [H]

Identifier: 284159974

GI number: 284159974

Start: 2400724

End: 2402388

Strand: Reverse

Name: fhaC [H]

Synonym: BURPS668_A2481

Alternate gene names: 284159974

Gene position: 2402388-2400724 (Counterclockwise)

Preceding gene: 284159977

Following gene: 126444573

Centisome position: 76.82

GC content: 64.2

Gene sequence:

>1665_bases
ATGACGGTGTTGCTGGCGGGCCGCTCGGTGCCGGCAAGCGCGTTCGGGCCGACGGTGCAGGACCGGGAGCGGGATCTGGG
GGAGAAGGCGCGACGGCAGCAGATGATCGAACAGCATAGGCGGGAGCACGCGGTCGAGCCGGCGGCCGGGTTGCCGGCGC
CAGCGCAAGCACCCGAGCTGGGCGGTGCGCGTTTTCCGATCACGCAAATCGAAGTGCGGGGCGGGGCGCGCCATAGCCGG
GAGATCGACCGGATTGTCGAGCGCTACCGGGGCGCGACCCTGGGGCAGGCGGAGATTTTCGCGCTGTTGCGTGATCTGAT
GAATTTCTACTATGGCCGCGGTTATATCACGACCGGCGTGTCGCTCGCCGAGCAAAACCTGTCGAGCGGGAAGCTGATCG
TGGTGGTCCATTGGGGCTACGTGAAGGGATGGCGCGTGAACGGCAAGGCGCCGGAGGGCATGCGCGAGCGGTTGATGTTG
AGCAGCGCGATGCCTGGCATAGAAGGTTCCGTTTTGAACATCCACGATATCGACCAGGCGATCGAGAATCTGAACGGCTT
GGGCGGAGCCGCCAAGATCAACGTCGTCCCCGCCGAGGAAGCCGGGTATTCCTATCTGGACGTCGTTTTGCAACGCTCGA
AGCCGTTCGCGGTGTCGGCGTCGGTCGATAACTCGGGTCTCGGCGATCGAGCGGGCGACGGCTTATACCGGTATGGCGCC
GATATCGCGGTGGCGCACCTGCTGGGCTGGAACGACGTGCTGACGCTCTCGGCCGGCCGTCGCTACTACCAGGACCCCGC
CCATCATGCCTACGATTCGCTGGCCGTGTCATACGGATGGCGCGTGGGCCGCTGGAGCGCCGATCTGCGGTATATCGCGC
AGCCGACCAAGAGCCTCCTTTCCGGAACCTATGGTGACTACCAACTGAGCGGCAATACGCAGGATGTCAACCTGCGCGTG
TCGCGCGTGCTTCGGCGCTGGCGGACCGGCACGGATGCCGTCTACGTTGCGATCGACCGCAAGCGCGCGCGCAACTATAT
CGACGACACGCTGATCGAGATCAACAGCAACACCCATACGAGCGTCACGGCGGGAGTCAATCGGCTGGACAGTCTGTTCG
GCGGAGTCGTATTCGCGGATGGGGGCTGGACGAGGGGCGTGGGCTGGCTGGGGGCGAGCGAGGACCCTGTGTCCGCCGGG
CAAGGGCCGCTGTCGCGTTACGACAAATTCAATCTGAACCTGAACTGGTCGCGCGACTTCACGGCGGGCTCGTTGCGAGC
CCGTTACACGGCGGCGGTGGGGGCGCAGTATTCGAAGGATGACCTTTACTACGACAGCAAGTTCGTCATTGGCGACCAGT
ACACCGTGCGCGGCTTCAAGATCCGGTCTGCCTATGGGGATAGCGGCGTGTCTGTATCGAACACGCTGAGCTTTCCGTTT
CCGACGTCGATCGGAACGGTCACACCGTTGGTCGGTGTGGATTGGGGTGCCGTCGGGAACAACGGCGAAGCGGACAATGG
CGGCTGGATCGGCGCAGTTGCGGGCGGGCTCCGGGTGTCGACGAAATGGGCCAATGCGGCGGTGACCATCGGCAAGCCGT
TCAGGGCGCTACCGGGCATGGGGTACGGGGTGGTCTGGTATTTGAGCGCATCAGCCACGTATTAG

Upstream 100 bases:

>100_bases
CGTTGGCAAGGGCATTCGATCGGCGCGAGCGGCCAGTCGGGAAGAGCGGGCGCACGGGGCGTACGGGCGCGTGTTGACGC
ATATCGTTTTGACGCTTGCC

Downstream 100 bases:

>100_bases
CCACGGGCCGTGCGCATACGAACCGGCGGTCGTTTCGCCGAGCGTTGAATCGATACATGGCATGGAATGCCAATGATCAG
TCATGCAGAGGAATGAGGTC

Product: HlyB family hemolysin activator protein

Products: NA

Alternate protein names: TpsB transporter [H]

Number of amino acids: Translated: 554; Mature: 553

Protein sequence:

>554_residues
MTVLLAGRSVPASAFGPTVQDRERDLGEKARRQQMIEQHRREHAVEPAAGLPAPAQAPELGGARFPITQIEVRGGARHSR
EIDRIVERYRGATLGQAEIFALLRDLMNFYYGRGYITTGVSLAEQNLSSGKLIVVVHWGYVKGWRVNGKAPEGMRERLML
SSAMPGIEGSVLNIHDIDQAIENLNGLGGAAKINVVPAEEAGYSYLDVVLQRSKPFAVSASVDNSGLGDRAGDGLYRYGA
DIAVAHLLGWNDVLTLSAGRRYYQDPAHHAYDSLAVSYGWRVGRWSADLRYIAQPTKSLLSGTYGDYQLSGNTQDVNLRV
SRVLRRWRTGTDAVYVAIDRKRARNYIDDTLIEINSNTHTSVTAGVNRLDSLFGGVVFADGGWTRGVGWLGASEDPVSAG
QGPLSRYDKFNLNLNWSRDFTAGSLRARYTAAVGAQYSKDDLYYDSKFVIGDQYTVRGFKIRSAYGDSGVSVSNTLSFPF
PTSIGTVTPLVGVDWGAVGNNGEADNGGWIGAVAGGLRVSTKWANAAVTIGKPFRALPGMGYGVVWYLSASATY

Sequences:

>Translated_554_residues
MTVLLAGRSVPASAFGPTVQDRERDLGEKARRQQMIEQHRREHAVEPAAGLPAPAQAPELGGARFPITQIEVRGGARHSR
EIDRIVERYRGATLGQAEIFALLRDLMNFYYGRGYITTGVSLAEQNLSSGKLIVVVHWGYVKGWRVNGKAPEGMRERLML
SSAMPGIEGSVLNIHDIDQAIENLNGLGGAAKINVVPAEEAGYSYLDVVLQRSKPFAVSASVDNSGLGDRAGDGLYRYGA
DIAVAHLLGWNDVLTLSAGRRYYQDPAHHAYDSLAVSYGWRVGRWSADLRYIAQPTKSLLSGTYGDYQLSGNTQDVNLRV
SRVLRRWRTGTDAVYVAIDRKRARNYIDDTLIEINSNTHTSVTAGVNRLDSLFGGVVFADGGWTRGVGWLGASEDPVSAG
QGPLSRYDKFNLNLNWSRDFTAGSLRARYTAAVGAQYSKDDLYYDSKFVIGDQYTVRGFKIRSAYGDSGVSVSNTLSFPF
PTSIGTVTPLVGVDWGAVGNNGEADNGGWIGAVAGGLRVSTKWANAAVTIGKPFRALPGMGYGVVWYLSASATY
>Mature_553_residues
TVLLAGRSVPASAFGPTVQDRERDLGEKARRQQMIEQHRREHAVEPAAGLPAPAQAPELGGARFPITQIEVRGGARHSRE
IDRIVERYRGATLGQAEIFALLRDLMNFYYGRGYITTGVSLAEQNLSSGKLIVVVHWGYVKGWRVNGKAPEGMRERLMLS
SAMPGIEGSVLNIHDIDQAIENLNGLGGAAKINVVPAEEAGYSYLDVVLQRSKPFAVSASVDNSGLGDRAGDGLYRYGAD
IAVAHLLGWNDVLTLSAGRRYYQDPAHHAYDSLAVSYGWRVGRWSADLRYIAQPTKSLLSGTYGDYQLSGNTQDVNLRVS
RVLRRWRTGTDAVYVAIDRKRARNYIDDTLIEINSNTHTSVTAGVNRLDSLFGGVVFADGGWTRGVGWLGASEDPVSAGQ
GPLSRYDKFNLNLNWSRDFTAGSLRARYTAAVGAQYSKDDLYYDSKFVIGDQYTVRGFKIRSAYGDSGVSVSNTLSFPFP
TSIGTVTPLVGVDWGAVGNNGEADNGGWIGAVAGGLRVSTKWANAAVTIGKPFRALPGMGYGVVWYLSASATY

Specific function: Member of a two partner secretion pathway (TPS) in which it mediates the secretion of filamentous hemagglutinin (FHA) [H]

COG id: COG2831

COG function: function code U; Hemolysin activation/secretion protein

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tpsB (TC 1.B.20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005565
- InterPro:   IPR013686 [H]

Pfam domain/function: PF08479 POTRA_2; PF03865 ShlB [H]

EC number: NA

Molecular weight: Translated: 60094; Mature: 59963

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVLLAGRSVPASAFGPTVQDRERDLGEKARRQQMIEQHRREHAVEPAAGLPAPAQAPEL
CEEEEECCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
GGARFPITQIEVRGGARHSREIDRIVERYRGATLGQAEIFALLRDLMNFYYGRGYITTGV
CCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEECCH
SLAEQNLSSGKLIVVVHWGYVKGWRVNGKAPEGMRERLMLSSAMPGIEGSVLNIHDIDQA
HHHHCCCCCCCEEEEEEECCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEHHHHHHH
IENLNGLGGAAKINVVPAEEAGYSYLDVVLQRSKPFAVSASVDNSGLGDRAGDGLYRYGA
HHHHCCCCCCEEEEEEECHHCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHCC
DIAVAHLLGWNDVLTLSAGRRYYQDPAHHAYDSLAVSYGWRVGRWSADLRYIAQPTKSLL
HHHHHHHHCCCCEEEECCCCHHHCCCHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHH
SGTYGDYQLSGNTQDVNLRVSRVLRRWRTGTDAVYVAIDRKRARNYIDDTLIEINSNTHT
CCCCCCEEECCCCCEEEHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHCCEEEEECCCCCC
SVTAGVNRLDSLFGGVVFADGGWTRGVGWLGASEDPVSAGQGPLSRYDKFNLNLNWSRDF
CHHHHHHHHHHHHCCEEEECCCCCCCEECCCCCCCCCCCCCCCHHHCCEEEEEEECCCCC
TAGSLRARYTAAVGAQYSKDDLYYDSKFVIGDQYTVRGFKIRSAYGDSGVSVSNTLSFPF
CCCCCCEEEEHHHCCCCCCCCEEECCEEEECCCEEEEEEEEEECCCCCCCEECCEECCCC
PTSIGTVTPLVGVDWGAVGNNGEADNGGWIGAVAGGLRVSTKWANAAVTIGKPFRALPGM
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEECCEEEEECCCHHHCCCC
GYGVVWYLSASATY
CCEEEEEEECCCCC
>Mature Secondary Structure 
TVLLAGRSVPASAFGPTVQDRERDLGEKARRQQMIEQHRREHAVEPAAGLPAPAQAPEL
EEEEECCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
GGARFPITQIEVRGGARHSREIDRIVERYRGATLGQAEIFALLRDLMNFYYGRGYITTGV
CCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEECCH
SLAEQNLSSGKLIVVVHWGYVKGWRVNGKAPEGMRERLMLSSAMPGIEGSVLNIHDIDQA
HHHHCCCCCCCEEEEEEECCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEHHHHHHH
IENLNGLGGAAKINVVPAEEAGYSYLDVVLQRSKPFAVSASVDNSGLGDRAGDGLYRYGA
HHHHCCCCCCEEEEEEECHHCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHCC
DIAVAHLLGWNDVLTLSAGRRYYQDPAHHAYDSLAVSYGWRVGRWSADLRYIAQPTKSLL
HHHHHHHHCCCCEEEECCCCHHHCCCHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHH
SGTYGDYQLSGNTQDVNLRVSRVLRRWRTGTDAVYVAIDRKRARNYIDDTLIEINSNTHT
CCCCCCEEECCCCCEEEHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHCCEEEEECCCCCC
SVTAGVNRLDSLFGGVVFADGGWTRGVGWLGASEDPVSAGQGPLSRYDKFNLNLNWSRDF
CHHHHHHHHHHHHCCEEEECCCCCCCEECCCCCCCCCCCCCCCHHHCCEEEEEEECCCCC
TAGSLRARYTAAVGAQYSKDDLYYDSKFVIGDQYTVRGFKIRSAYGDSGVSVSNTLSFPF
CCCCCCEEEEHHHCCCCCCCCEEECCEEEECCCEEEEEEEEEECCCCCCCEECCEECCCC
PTSIGTVTPLVGVDWGAVGNNGEADNGGWIGAVAGGLRVSTKWANAAVTIGKPFRALPGM
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEECCEEEEECCCHHHCCCC
GYGVVWYLSASATY
CCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12910271 [H]