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The map label for this gene is ntd [H]

Identifier: 28379732

GI number: 28379732

Start: 3011532

End: 3012005

Strand: Direct

Name: ntd [H]

Synonym: lp_3397

Alternate gene names: 28379732

Gene position: 3011532-3012005 (Clockwise)

Preceding gene: 28379728

Following gene: 28379736

Centisome position: 91.03

GC content: 45.99

Gene sequence:

>474_bases
ATGAATAACGTTTACCTAGCTGCACCGTTTTTTGACGAGGCTCAGAAGGAACGCATCCAACAAGTGAAGTCGGCGCTGTT
GGCTAACCCGACGATCAACCCCGATGGTATCTTCATCCCAGAAGAACATCAATTTGAAGAAGAACCTTTTGGTAGCCGTG
CTTGGCAACAATACGTCTACGCATCCGATATGCGTCAAGTTCATCGGGCCGATGTCGTTGTTGCCATTCTTGACTTCGAC
ATGACTAGTGCAACCAATGAGCCAGATTCTGGCACAATGTTTGAAATCGGTGCGGCCGTGGCTGAAAAGACACCCGTCAT
CATCGTTCAGTTTGATGCGAATAAAGAACTCAATTTAATGATTGCCCAAGGATTAACGGCCTATTTCGATGCTAGTAAAG
ATGGTCTGAAAGAATTATCTGCCTACAATTGTGATGACTTACGTTCTAAGCCCGCTCACCGGCCAGTATTTTAG

Upstream 100 bases:

>100_bases
CTTTTAATAATGATTCACGCCAAATCAAGGCTTGAAAGCCACCCCATATTTCCGCTAAAATAGGCTTATCCAAATTTTGT
TATCCAGAAAGGAAATCATT

Downstream 100 bases:

>100_bases
GCACACAACTTAATGACACGAAAAAATGCTGCTTGCAAACGAATAACGTTTGTAAGCAGCATTTTAACTAACTTGAATTG
ATCATCCTTATTCAGCAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: N-deoxyribosyltransferase [H]

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MNNVYLAAPFFDEAQKERIQQVKSALLANPTINPDGIFIPEEHQFEEEPFGSRAWQQYVYASDMRQVHRADVVVAILDFD
MTSATNEPDSGTMFEIGAAVAEKTPVIIVQFDANKELNLMIAQGLTAYFDASKDGLKELSAYNCDDLRSKPAHRPVF

Sequences:

>Translated_157_residues
MNNVYLAAPFFDEAQKERIQQVKSALLANPTINPDGIFIPEEHQFEEEPFGSRAWQQYVYASDMRQVHRADVVVAILDFD
MTSATNEPDSGTMFEIGAAVAEKTPVIIVQFDANKELNLMIAQGLTAYFDASKDGLKELSAYNCDDLRSKPAHRPVF
>Mature_157_residues
MNNVYLAAPFFDEAQKERIQQVKSALLANPTINPDGIFIPEEHQFEEEPFGSRAWQQYVYASDMRQVHRADVVVAILDFD
MTSATNEPDSGTMFEIGAAVAEKTPVIIVQFDANKELNLMIAQGLTAYFDASKDGLKELSAYNCDDLRSKPAHRPVF

Specific function: Catalyzes the cleavage of the glycosidic bond of 2'- deoxyribonucleosides and the transfer of the deoxyribosyl moiety to an acceptor purine or pyrimidine base [H]

COG id: COG3613

COG function: function code F; Nucleoside 2-deoxyribosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nucleoside deoxyribosyltransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007710 [H]

Pfam domain/function: PF05014 Nuc_deoxyrib_tr [H]

EC number: =2.4.2.6 [H]

Molecular weight: Translated: 17604; Mature: 17604

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNVYLAAPFFDEAQKERIQQVKSALLANPTINPDGIFIPEEHQFEEEPFGSRAWQQYVY
CCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHH
ASDMRQVHRADVVVAILDFDMTSATNEPDSGTMFEIGAAVAEKTPVIIVQFDANKELNLM
HHHHHHHHHHCEEEEEEECCCCCCCCCCCCCCEEEHHHHHHCCCCEEEEEECCCCCEEEE
IAQGLTAYFDASKDGLKELSAYNCDDLRSKPAHRPVF
EECCCHHHHCCCHHHHHHHHHCCCHHHHCCCCCCCCC
>Mature Secondary Structure
MNNVYLAAPFFDEAQKERIQQVKSALLANPTINPDGIFIPEEHQFEEEPFGSRAWQQYVY
CCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHH
ASDMRQVHRADVVVAILDFDMTSATNEPDSGTMFEIGAAVAEKTPVIIVQFDANKELNLM
HHHHHHHHHHCEEEEEEECCCCCCCCCCCCCCEEEHHHHHHCCCCEEEEEECCCCCEEEE
IAQGLTAYFDASKDGLKELSAYNCDDLRSKPAHRPVF
EECCCHHHHCCCHHHHHHHHHCCCHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA