| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is yutG [H]
Identifier: 28379690
GI number: 28379690
Start: 2975421
End: 2975921
Strand: Direct
Name: yutG [H]
Synonym: lp_3342
Alternate gene names: 28379690
Gene position: 2975421-2975921 (Clockwise)
Preceding gene: 28379684
Following gene: 28379701
Centisome position: 89.94
GC content: 44.11
Gene sequence:
>501_bases ATGGAAAAACCAACGTTTAAATATCCTGATAAGGCTGCGTATGAGTTCGTCATTCAAGCCTTAGCCGCAAAAGGGATTAC TTATCATGAAATTGCGCATATCACTTATAACTTACAAACAAAATACGTCCCTAACTTAACGATCGAAGAGTGCGAAATGG AGACGCAAGAAGTACTGCACAAGCGCGAACTATTGAACAATGCGATGGTTGCGTTAGAACTCGACCGACTTGCCACAGAA GGCCAGCTAAACGAGCCGCTCCAATCTATCATTGCCAGTGACGCCGGCGTCTTCGGTGTTGATGAAGGCTTAGCACTTAA TATGGCGAATATTTACGGCACCATCGGCGTCACTAATTATGGTTACGTGGATAAAGTTAAAGAAGGCGTCATTAAGAAGT TAGATACTGATAAGTCAGGCGTTGTTAACACGTTTATTGATGACCTAGTTGGTGCGATCGCGGCGGCCGTTGCGGCTAAA ATTGCACATAAGTATGCCTAA
Upstream 100 bases:
>100_bases TTGAACCCAAATCATATTCTTTAGCCCCCCATCTCGTTATAATGGACTTACTAGGTTAAATAACTAACCTACTCAAATTG TTTATTTCTGGAGGGTAACT
Downstream 100 bases:
>100_bases GCATTGTATTTGCTAGTCGTTATCGCTTATAAAAATCAGCAGGCATCCTACTTCAATGCCTGTTTGCTTGAATTAGCTAG TCTGTACTGGATATGTCCGC
Product: low temperature requirement C protein (putative)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MEKPTFKYPDKAAYEFVIQALAAKGITYHEIAHITYNLQTKYVPNLTIEECEMETQEVLHKRELLNNAMVALELDRLATE GQLNEPLQSIIASDAGVFGVDEGLALNMANIYGTIGVTNYGYVDKVKEGVIKKLDTDKSGVVNTFIDDLVGAIAAAVAAK IAHKYA
Sequences:
>Translated_166_residues MEKPTFKYPDKAAYEFVIQALAAKGITYHEIAHITYNLQTKYVPNLTIEECEMETQEVLHKRELLNNAMVALELDRLATE GQLNEPLQSIIASDAGVFGVDEGLALNMANIYGTIGVTNYGYVDKVKEGVIKKLDTDKSGVVNTFIDDLVGAIAAAVAAK IAHKYA >Mature_166_residues MEKPTFKYPDKAAYEFVIQALAAKGITYHEIAHITYNLQTKYVPNLTIEECEMETQEVLHKRELLNNAMVALELDRLATE GQLNEPLQSIIASDAGVFGVDEGLALNMANIYGTIGVTNYGYVDKVKEGVIKKLDTDKSGVVNTFIDDLVGAIAAAVAAK IAHKYA
Specific function: Unknown
COG id: COG1267
COG function: function code I; Phosphatidylglycerophosphatase A and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis ypjQ [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007686 [H]
Pfam domain/function: PF04608 PgpA [H]
EC number: NA
Molecular weight: Translated: 18180; Mature: 18180
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKPTFKYPDKAAYEFVIQALAAKGITYHEIAHITYNLQTKYVPNLTIEECEMETQEVLH CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHEEEEECEECCCCCCCHHHHHHHHHHHHH KRELLNNAMVALELDRLATEGQLNEPLQSIIASDAGVFGVDEGLALNMANIYGTIGVTNY HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCEEEHHHHHEECCCCCC GYVDKVKEGVIKKLDTDKSGVVNTFIDDLVGAIAAAVAAKIAHKYA CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEKPTFKYPDKAAYEFVIQALAAKGITYHEIAHITYNLQTKYVPNLTIEECEMETQEVLH CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHEEEEECEECCCCCCCHHHHHHHHHHHHH KRELLNNAMVALELDRLATEGQLNEPLQSIIASDAGVFGVDEGLALNMANIYGTIGVTNY HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCEEEHHHHHEECCCCCC GYVDKVKEGVIKKLDTDKSGVVNTFIDDLVGAIAAAVAAKIAHKYA CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]