Click here to switch to the map view.

The map label for this gene is 28379568

Identifier: 28379568

GI number: 28379568

Start: 2836380

End: 2836934

Strand: Direct

Name: 28379568

Synonym: lp_3178

Alternate gene names: NA

Gene position: 2836380-2836934 (Clockwise)

Preceding gene: 28379567

Following gene: 28379569

Centisome position: 85.74

GC content: 44.5

Gene sequence:

>555_bases
ATGCAAAAAACGAAAGCTTGGTATCAAAAATGGTGGGCGTGGGTCCTGATTCTCCTTGGCATCTTCTTTGTCATCAGCCT
CGTCAATTCTCCACAAGACGGTAAAAACTCACAAGCAGCGACGACCAAAAAGACCAGTGCTAGCAAGTCCACCGCTAAGG
AAACCCCGGCAAATACGATTTATAAAGTCGGGCAGACAGCCACCATCGATCACGTGCAAGTAACGGTTAATAATGTTAAA
ACCGCAACGACGCTCAATGATGTTCAGCCTAAAACTGGCAATCAATATTATACGGTCACCGTAACATTGAAAAATAGCGG
TAGAGATAAAGTCAGCTATAACCCGTTTGACTTTAAAATCAAGGCCGCCGGTAACCAAACTAGCCTAGATGAGATCAACA
TTGATGAAAATAACCAATTAGATAGTGGTGACCTGACCGCTGGTGGCTCTGTCAGTGGTACCATGACTGGTCAAGCCAAA
GCAGATGGGTCCGTTGAACTCATCTACAATCCCAGCTACTTCAGTGATCGGCATTTGACCTTTAAATTACAGTAG

Upstream 100 bases:

>100_bases
GTGGGATTCTTAACTTCGTCTTTGTCAGCTTCTTCGGGATTCTAAGCGGTCTGCTCATTGTTATTGCGGGCGGCTTAGCA
CTAAGAAAGTAGGTAAGCTC

Downstream 100 bases:

>100_bases
TTTCTGGTACACTAATACTAATTAAGAAGGAGTATTAGGGGGGCACTAACCGTGGTAGAACGCGCAACTAAGGAACTATT
TAACGAAATCAAACATGCAA

Product: extracellular protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MQKTKAWYQKWWAWVLILLGIFFVISLVNSPQDGKNSQAATTKKTSASKSTAKETPANTIYKVGQTATIDHVQVTVNNVK
TATTLNDVQPKTGNQYYTVTVTLKNSGRDKVSYNPFDFKIKAAGNQTSLDEINIDENNQLDSGDLTAGGSVSGTMTGQAK
ADGSVELIYNPSYFSDRHLTFKLQ

Sequences:

>Translated_184_residues
MQKTKAWYQKWWAWVLILLGIFFVISLVNSPQDGKNSQAATTKKTSASKSTAKETPANTIYKVGQTATIDHVQVTVNNVK
TATTLNDVQPKTGNQYYTVTVTLKNSGRDKVSYNPFDFKIKAAGNQTSLDEINIDENNQLDSGDLTAGGSVSGTMTGQAK
ADGSVELIYNPSYFSDRHLTFKLQ
>Mature_184_residues
MQKTKAWYQKWWAWVLILLGIFFVISLVNSPQDGKNSQAATTKKTSASKSTAKETPANTIYKVGQTATIDHVQVTVNNVK
TATTLNDVQPKTGNQYYTVTVTLKNSGRDKVSYNPFDFKIKAAGNQTSLDEINIDENNQLDSGDLTAGGSVSGTMTGQAK
ADGSVELIYNPSYFSDRHLTFKLQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20194; Mature: 20194

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKTKAWYQKWWAWVLILLGIFFVISLVNSPQDGKNSQAATTKKTSASKSTAKETPANTI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
YKVGQTATIDHVQVTVNNVKTATTLNDVQPKTGNQYYTVTVTLKNSGRDKVSYNPFDFKI
EECCCCEEEEEEEEEECCEEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCEECCCEEEE
KAAGNQTSLDEINIDENNQLDSGDLTAGGSVSGTMTGQAKADGSVELIYNPSYFSDRHLT
EECCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCEEE
FKLQ
EEEC
>Mature Secondary Structure
MQKTKAWYQKWWAWVLILLGIFFVISLVNSPQDGKNSQAATTKKTSASKSTAKETPANTI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
YKVGQTATIDHVQVTVNNVKTATTLNDVQPKTGNQYYTVTVTLKNSGRDKVSYNPFDFKI
EECCCCEEEEEEEEEECCEEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCEECCCEEEE
KAAGNQTSLDEINIDENNQLDSGDLTAGGSVSGTMTGQAKADGSVELIYNPSYFSDRHLT
EECCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCEEE
FKLQ
EEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA