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The map label for this gene is dps [H]

Identifier: 28379536

GI number: 28379536

Start: 2796734

End: 2797201

Strand: Direct

Name: dps [H]

Synonym: lp_3128

Alternate gene names: 28379536

Gene position: 2796734-2797201 (Clockwise)

Preceding gene: 28379535

Following gene: 28379542

Centisome position: 84.54

GC content: 43.16

Gene sequence:

>468_bases
ATGAAATACACGAAAACCAAAGCAGTATTAAATCAACTCGTTGCCGATTTGAGCCAGATGTCAATGATTATCCATCAGAC
GCATTGGTACATGCGTGGACCCAACTTTTTAAAGTTGCACCCCTTGATGGATGAGTTCATGGAAGAAATTGACAGCCAAC
TCGATGTCATTTCTGAACGGCTGATTGCGCTTGATGGCAGTCCTTACTCGACCTTAAAAGAAATGGCCGAAAACACTAAG
ATTCAAGACTGGCCTGGTGAATGGGACAAAACAACCCCAGAACGCCTCGCACACTTAGTTGATGGCTATCGTTACTTGGA
AGACCTTTACCAACACGGCATTGAAGTATCCGATGTTGAAAAAGACTTCAGTACCCAAGATATTTTCATTGGTCTCAAAA
CCGCAATTGAAAAGAAAATCTGGATGATTCAGGCAGAGCTTGGGTCGGCGCCGGAAATTGATGAATAA

Upstream 100 bases:

>100_bases
TAATTCTACGGGCGATAAATAACTTAATTTGCCAGTGTATAACGTTTCAGATTAAGCTACCACTAAGTTATAATAACCAT
ATCGAAAGGAGATCAATCTA

Downstream 100 bases:

>100_bases
AATCATATTATCGTAACCATCAAATCATATTTTTAATTCAAAACACCATAAACAAAGTGCACTACGATTATCCGCAGTGC
ACTTTGTTTATGGTGTTTTT

Product: stress induced DNA binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MKYTKTKAVLNQLVADLSQMSMIIHQTHWYMRGPNFLKLHPLMDEFMEEIDSQLDVISERLIALDGSPYSTLKEMAENTK
IQDWPGEWDKTTPERLAHLVDGYRYLEDLYQHGIEVSDVEKDFSTQDIFIGLKTAIEKKIWMIQAELGSAPEIDE

Sequences:

>Translated_155_residues
MKYTKTKAVLNQLVADLSQMSMIIHQTHWYMRGPNFLKLHPLMDEFMEEIDSQLDVISERLIALDGSPYSTLKEMAENTK
IQDWPGEWDKTTPERLAHLVDGYRYLEDLYQHGIEVSDVEKDFSTQDIFIGLKTAIEKKIWMIQAELGSAPEIDE
>Mature_155_residues
MKYTKTKAVLNQLVADLSQMSMIIHQTHWYMRGPNFLKLHPLMDEFMEEIDSQLDVISERLIALDGSPYSTLKEMAENTK
IQDWPGEWDKTTPERLAHLVDGYRYLEDLYQHGIEVSDVEKDFSTQDIFIGLKTAIEKKIWMIQAELGSAPEIDE

Specific function: Protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral. It binds and incorporates Fe(2+) ion. Effectively inhibits hydroxyl radical formation by the Fenton reaction and is esse

COG id: COG0783

COG function: function code P; DNA-binding ferritin-like protein (oxidative damage protectant)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dps family [H]

Homologues:

Organism=Escherichia coli, GI1787032, Length=142, Percent_Identity=27.4647887323944, Blast_Score=67, Evalue=6e-13,

Paralogues:

None

Copy number: 6720 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002177
- InterPro:   IPR023188
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR008331 [H]

Pfam domain/function: PF00210 Ferritin [H]

EC number: NA

Molecular weight: Translated: 18022; Mature: 18022

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: PS00818 DPS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYTKTKAVLNQLVADLSQMSMIIHQTHWYMRGPNFLKLHPLMDEFMEEIDSQLDVISER
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHH
LIALDGSPYSTLKEMAENTKIQDWPGEWDKTTPERLAHLVDGYRYLEDLYQHGIEVSDVE
HHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH
KDFSTQDIFIGLKTAIEKKIWMIQAELGSAPEIDE
HCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKYTKTKAVLNQLVADLSQMSMIIHQTHWYMRGPNFLKLHPLMDEFMEEIDSQLDVISER
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHH
LIALDGSPYSTLKEMAENTKIQDWPGEWDKTTPERLAHLVDGYRYLEDLYQHGIEVSDVE
HHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH
KDFSTQDIFIGLKTAIEKKIWMIQAELGSAPEIDE
HCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10850989 [H]