| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
Click here to switch to the map view.
The map label for this gene is pbuG [H]
Identifier: 28379207
GI number: 28379207
Start: 2412321
End: 2413628
Strand: Direct
Name: pbuG [H]
Synonym: lp_2712
Alternate gene names: 28379207
Gene position: 2412321-2413628 (Clockwise)
Preceding gene: 28379206
Following gene: 28379209
Centisome position: 72.92
GC content: 47.94
Gene sequence:
>1308_bases ATTATTCTAGAACAATTATTTCATTTGCGTGAAAACCGCACTTCAGTCCGCCGCGAGTTGATTGGTGGTCTGACGACCTT TTTAGCCATGTCATATATTTTAGCCGTAAATCCCGAACTATTGGGAAGTACTGGTATGAGTAAGACCGCCGTCTTCACCG CAACGATTTTAGCGGCCATTGTTGGTTGTCTCTTGATGGGGCTAGTTGCCAACTTTCCCGTAGCATTAGCACCGGGGATG GGGCTGAATGCCTTCTTTACTTACACAGTTGTCCAGGAATGGCACATTCCTTGGCAAACCGCTTTGGCGGGAGTCTTTGT TGCCGGAATTCTTTTCATCCTACTAACGCTCTCCAAGTTACGCGATAAACTGATCAACTTGATTCCAAGTGCGCTAAAAT ACGCCGTATCTGCCGGAATTGGCTTGTTCATTGCTTTTTCAGGACTACAAACCTCTGGGATTATCGTTGCGAATAAGTCC AACGCGGTCGCCCTGGGTAACTTGCACAGTCCCACCGTTTTGTTGGCGATTTTCGGGATTATCGTCGGCATCATGCTAGT CACCGCTAATGTAACTGGTGGTATTTTCTGGGGCATGTTCATCACCGCCGCAGTCGGAATGATCTTCGGGATTATTCCCC TACCAACTGGGATTATCAGTGGGGTTCCGAGCGTTCAACCGATTTTTGGTCAAGCTGTGACACACCTTGGTAATATTAAT TCGTTTCAAATGATCATTGTCATCCTGACGTTCTTCATCATTGGCCTTTTCGATACGTCGGGAACCTTGGTTGGGGTGGC AACCGAAGCCGGCATGGTGGACAAAGAATCCGGCGAAGTCAAAGGCGTTGGTAAAGCGCTCTTTAGTGGTGCACTCGCCA CAACTTTAGGAGCAGTCTTTGGCACGTCACCGACGACGGCTTATGTTGAATCGACTTCCGGCGTTGCCGTGGGGGCCCGT ACTGGGTTATCTTCCGTCTTCGTTGCCCTCTTGTTTGCCATCGCCGCCTTTTTCTCTCCAATTTTGACGGTGATTACGTC CGCGGTGACCGCTTCAGCCCTGATTATCGTTGGTATTTTAATGTTATCAAACGTTCAATATATTGATTGGACCAAGTTTG AAATCGCCGTCCCAGCCTTTTTCACCATGATTATGATGCTACTAACTTACAGTATCTCAGAAGGTTTGGCCGTTGGCTTT ATCTTCTACCCAATCACCATGACGGTCAAAGGCCGTTGGCGTGAAGTAAACGCCCTCATGTGGACGATGATGGTCGTCTT CATTCTCTACTTTGCATTTGTCGCTTAG
Upstream 100 bases:
>100_bases GAGGCAATAAACTGATTAATCCCCTGTTACCCTAAAAATCAGTATGTTATACTAGACAATTGTTGAATTGTTAGTTTTTT ATTAATTTTAGGAGTGGGTC
Downstream 100 bases:
>100_bases AACTGATGGTTCGCTAAGCAATGATGGCAGTCTAAAACACCCCTGAGTCTTTAACTCAGGGGTGTTTTTTAGTAGGCACG GCTGCATCTAACGCCTACTA
Product: transport protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 435; Mature: 435
Protein sequence:
>435_residues MILEQLFHLRENRTSVRRELIGGLTTFLAMSYILAVNPELLGSTGMSKTAVFTATILAAIVGCLLMGLVANFPVALAPGM GLNAFFTYTVVQEWHIPWQTALAGVFVAGILFILLTLSKLRDKLINLIPSALKYAVSAGIGLFIAFSGLQTSGIIVANKS NAVALGNLHSPTVLLAIFGIIVGIMLVTANVTGGIFWGMFITAAVGMIFGIIPLPTGIISGVPSVQPIFGQAVTHLGNIN SFQMIIVILTFFIIGLFDTSGTLVGVATEAGMVDKESGEVKGVGKALFSGALATTLGAVFGTSPTTAYVESTSGVAVGAR TGLSSVFVALLFAIAAFFSPILTVITSAVTASALIIVGILMLSNVQYIDWTKFEIAVPAFFTMIMMLLTYSISEGLAVGF IFYPITMTVKGRWREVNALMWTMMVVFILYFAFVA
Sequences:
>Translated_435_residues MILEQLFHLRENRTSVRRELIGGLTTFLAMSYILAVNPELLGSTGMSKTAVFTATILAAIVGCLLMGLVANFPVALAPGM GLNAFFTYTVVQEWHIPWQTALAGVFVAGILFILLTLSKLRDKLINLIPSALKYAVSAGIGLFIAFSGLQTSGIIVANKS NAVALGNLHSPTVLLAIFGIIVGIMLVTANVTGGIFWGMFITAAVGMIFGIIPLPTGIISGVPSVQPIFGQAVTHLGNIN SFQMIIVILTFFIIGLFDTSGTLVGVATEAGMVDKESGEVKGVGKALFSGALATTLGAVFGTSPTTAYVESTSGVAVGAR TGLSSVFVALLFAIAAFFSPILTVITSAVTASALIIVGILMLSNVQYIDWTKFEIAVPAFFTMIMMLLTYSISEGLAVGF IFYPITMTVKGRWREVNALMWTMMVVFILYFAFVA >Mature_435_residues MILEQLFHLRENRTSVRRELIGGLTTFLAMSYILAVNPELLGSTGMSKTAVFTATILAAIVGCLLMGLVANFPVALAPGM GLNAFFTYTVVQEWHIPWQTALAGVFVAGILFILLTLSKLRDKLINLIPSALKYAVSAGIGLFIAFSGLQTSGIIVANKS NAVALGNLHSPTVLLAIFGIIVGIMLVTANVTGGIFWGMFITAAVGMIFGIIPLPTGIISGVPSVQPIFGQAVTHLGNIN SFQMIIVILTFFIIGLFDTSGTLVGVATEAGMVDKESGEVKGVGKALFSGALATTLGAVFGTSPTTAYVESTSGVAVGAR TGLSSVFVALLFAIAAFFSPILTVITSAVTASALIIVGILMLSNVQYIDWTKFEIAVPAFFTMIMMLLTYSISEGLAVGF IFYPITMTVKGRWREVNALMWTMMVVFILYFAFVA
Specific function: Involved in the uptake of the purine bases hypoxanthine and guanine [H]
COG id: COG2252
COG function: function code R; Permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the xanthine/uracil permease family. AzgA purine transporter (TC 2.A.1.40) subfamily [H]
Homologues:
Organism=Escherichia coli, GI87082309, Length=415, Percent_Identity=42.8915662650602, Blast_Score=327, Evalue=8e-91, Organism=Escherichia coli, GI1790150, Length=435, Percent_Identity=41.8390804597701, Blast_Score=314, Evalue=9e-87, Organism=Escherichia coli, GI1790499, Length=438, Percent_Identity=32.8767123287671, Blast_Score=215, Evalue=5e-57, Organism=Escherichia coli, GI48994909, Length=420, Percent_Identity=32.1428571428571, Blast_Score=190, Evalue=2e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006043 [H]
Pfam domain/function: PF00860 Xan_ur_permease [H]
EC number: NA
Molecular weight: Translated: 46020; Mature: 46020
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILEQLFHLRENRTSVRRELIGGLTTFLAMSYILAVNPELLGSTGMSKTAVFTATILAAI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHH VGCLLMGLVANFPVALAPGMGLNAFFTYTVVQEWHIPWQTALAGVFVAGILFILLTLSKL HHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH RDKLINLIPSALKYAVSAGIGLFIAFSGLQTSGIIVANKSNAVALGNLHSPTVLLAIFGI HHHHHHHHHHHHHHHHHCCHHHEEEECCCCCCCEEEECCCCEEEECCCCCHHHHHHHHHH IVGIMLVTANVTGGIFWGMFITAAVGMIFGIIPLPTGIISGVPSVQPIFGQAVTHLGNIN HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHCCCC SFQMIIVILTFFIIGLFDTSGTLVGVATEAGMVDKESGEVKGVGKALFSGALATTLGAVF HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH GTSPTTAYVESTSGVAVGARTGLSSVFVALLFAIAAFFSPILTVITSAVTASALIIVGIL CCCCCCEEEECCCCEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLSNVQYIDWTKFEIAVPAFFTMIMMLLTYSISEGLAVGFIFYPITMTVKGRWREVNALM HHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEEEHEEEEECCHHHHHHHH WTMMVVFILYFAFVA HHHHHHHHHHHHHHC >Mature Secondary Structure MILEQLFHLRENRTSVRRELIGGLTTFLAMSYILAVNPELLGSTGMSKTAVFTATILAAI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHH VGCLLMGLVANFPVALAPGMGLNAFFTYTVVQEWHIPWQTALAGVFVAGILFILLTLSKL HHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH RDKLINLIPSALKYAVSAGIGLFIAFSGLQTSGIIVANKSNAVALGNLHSPTVLLAIFGI HHHHHHHHHHHHHHHHHCCHHHEEEECCCCCCCEEEECCCCEEEECCCCCHHHHHHHHHH IVGIMLVTANVTGGIFWGMFITAAVGMIFGIIPLPTGIISGVPSVQPIFGQAVTHLGNIN HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHCCCC SFQMIIVILTFFIIGLFDTSGTLVGVATEAGMVDKESGEVKGVGKALFSGALATTLGAVF HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH GTSPTTAYVESTSGVAVGARTGLSSVFVALLFAIAAFFSPILTVITSAVTASALIIVGIL CCCCCCEEEECCCCEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLSNVQYIDWTKFEIAVPAFFTMIMMLLTYSISEGLAVGFIFYPITMTVKGRWREVNALM HHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEEEHEEEEECCHHHHHHHH WTMMVVFILYFAFVA HHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377; 11591660 [H]