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The map label for this gene is ydeY [C]

Identifier: 28379081

GI number: 28379081

Start: 2267642

End: 2268550

Strand: Direct

Name: ydeY [C]

Synonym: lp_2542

Alternate gene names: 28379081

Gene position: 2267642-2268550 (Clockwise)

Preceding gene: 28379080

Following gene: 28379082

Centisome position: 68.54

GC content: 46.53

Gene sequence:

>909_bases
ATGAGTATGATCGTATCGAGTATCGGCCAAGGCCTCTTGTGGGCAACCTTAGGCGTCGCATTATTTTTGACATTTCGAAT
TCTTGATTTTCCTGATATGACCGTCGAAGGGACGTTTCCACTCGGTGCGGCCACTGCTGTCATGGCGATTAGCCATGGAA
TGGGCCCCGTTACCGCTTCCCTGTTAGCCTTCGTTGCGGGCGCGATTACCGGCCTGGTCACCGGCCTACTTTATACCAAG
GGTAAAGTGCCCATTCTCTTAGCCGGGATTCTAGTGATGACCGCGTGCTTATCAATCAATTTGCGCATTATGGGCGGCAG
TTCCAACGTTTCATTGCTAGGCAAACAAACTATTTTTTCTAATCACTTTTTGGAATCACTGCCTAAATATTTTGACAGCG
TCTTTGTTGGCCTAGTAGTGATCAGTATCATTACCGTGCTTCTGATTGTCTTCTTGCAAACTAACCTCGGCCAAGCCTTC
ATTGTCACTGGTGACAATCGTGAAATGGCACGTTCAATTGGTATTAACACCGATAACATGACCATCATGGGATTGATGGT
CTCTAACGGTATCATTGGCCTGGGCGGCGCATTAATTGCGCAAAATAACGGTTATGCCGATGTCAGCATGGGAATCGGAA
TCATCGTAATTGCGCTAGCCTCGATCATCATCGGTGAAGTTGTCTTTGGTGAATTAACGTTGAATCAACGACTCGTTGCG
GTTACCCTCGGCAGTATTTTGTATCAGTTCGTGCGCCTGTTAGTCCTCCAACTGGGCTTCAACACCAACGACATGAACCT
GTTATCCGCATTAATTCTGGCAATCTGCTTAATGTTACCGCAATTCAGTAAAGTTCTACATCTTAATCACGTTTTGAAGA
AGGGAGTGGCCCGTTATGACGAACAGTAG

Upstream 100 bases:

>100_bases
AGGGTAAGATGACCATCAATTTAAGTGAAGCTAAAAAGCTCGGCATCAAGTTCCCAGCAAGTGTCCTTAAAGAAGCCAAA
GCGAAAGGGGTTATTTACAA

Downstream 100 bases:

>100_bases
TGCCCCATTATTATCATTAAAAAATATCGTGACCAAAGTTAATCCGGGAACCCCGAATGAGGTCAAAATTTTGCGGGGCC
TGAACTTAGACGTCTATGAT

Product: ABC transporter, permease protein (putative)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 301

Protein sequence:

>302_residues
MSMIVSSIGQGLLWATLGVALFLTFRILDFPDMTVEGTFPLGAATAVMAISHGMGPVTASLLAFVAGAITGLVTGLLYTK
GKVPILLAGILVMTACLSINLRIMGGSSNVSLLGKQTIFSNHFLESLPKYFDSVFVGLVVISIITVLLIVFLQTNLGQAF
IVTGDNREMARSIGINTDNMTIMGLMVSNGIIGLGGALIAQNNGYADVSMGIGIIVIALASIIIGEVVFGELTLNQRLVA
VTLGSILYQFVRLLVLQLGFNTNDMNLLSALILAICLMLPQFSKVLHLNHVLKKGVARYDEQ

Sequences:

>Translated_302_residues
MSMIVSSIGQGLLWATLGVALFLTFRILDFPDMTVEGTFPLGAATAVMAISHGMGPVTASLLAFVAGAITGLVTGLLYTK
GKVPILLAGILVMTACLSINLRIMGGSSNVSLLGKQTIFSNHFLESLPKYFDSVFVGLVVISIITVLLIVFLQTNLGQAF
IVTGDNREMARSIGINTDNMTIMGLMVSNGIIGLGGALIAQNNGYADVSMGIGIIVIALASIIIGEVVFGELTLNQRLVA
VTLGSILYQFVRLLVLQLGFNTNDMNLLSALILAICLMLPQFSKVLHLNHVLKKGVARYDEQ
>Mature_301_residues
SMIVSSIGQGLLWATLGVALFLTFRILDFPDMTVEGTFPLGAATAVMAISHGMGPVTASLLAFVAGAITGLVTGLLYTKG
KVPILLAGILVMTACLSINLRIMGGSSNVSLLGKQTIFSNHFLESLPKYFDSVFVGLVVISIITVLLIVFLQTNLGQAFI
VTGDNREMARSIGINTDNMTIMGLMVSNGIIGLGGALIAQNNGYADVSMGIGIIVIALASIIIGEVVFGELTLNQRLVAV
TLGSILYQFVRLLVLQLGFNTNDMNLLSALILAICLMLPQFSKVLHLNHVLKKGVARYDEQ

Specific function: Probably Part Of The Binding-Protein-Dependent Transport System Ego/Ydeyz. Probably Responsible For The Translocation Of The Substrate Across The Membrane. [C]

COG id: COG4120

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 32019; Mature: 31888

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMIVSSIGQGLLWATLGVALFLTFRILDFPDMTVEGTFPLGAATAVMAISHGMGPVTAS
CCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHCCCCHHHHH
LLAFVAGAITGLVTGLLYTKGKVPILLAGILVMTACLSINLRIMGGSSNVSLLGKQTIFS
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHH
NHFLESLPKYFDSVFVGLVVISIITVLLIVFLQTNLGQAFIVTGDNREMARSIGINTDNM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCCCCE
TIMGLMVSNGIIGLGGALIAQNNGYADVSMGIGIIVIALASIIIGEVVFGELTLNQRLVA
EEEEEEHHCCCEECCCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
VTLGSILYQFVRLLVLQLGFNTNDMNLLSALILAICLMLPQFSKVLHLNHVLKKGVARYD
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EQ
CC
>Mature Secondary Structure 
SMIVSSIGQGLLWATLGVALFLTFRILDFPDMTVEGTFPLGAATAVMAISHGMGPVTAS
CCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHCCCCHHHHH
LLAFVAGAITGLVTGLLYTKGKVPILLAGILVMTACLSINLRIMGGSSNVSLLGKQTIFS
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHH
NHFLESLPKYFDSVFVGLVVISIITVLLIVFLQTNLGQAFIVTGDNREMARSIGINTDNM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCCCCE
TIMGLMVSNGIIGLGGALIAQNNGYADVSMGIGIIVIALASIIIGEVVFGELTLNQRLVA
EEEEEEHHCCCEECCCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
VTLGSILYQFVRLLVLQLGFNTNDMNLLSALILAICLMLPQFSKVLHLNHVLKKGVARYD
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EQ
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]