Definition Lactobacillus plantarum WCFS1, complete genome.
Accession NC_004567
Length 3,308,274

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The map label for this gene is 28378410

Identifier: 28378410

GI number: 28378410

Start: 1565021

End: 1566367

Strand: Direct

Name: 28378410

Synonym: lp_1729

Alternate gene names: NA

Gene position: 1565021-1566367 (Clockwise)

Preceding gene: 28378409

Following gene: 28378411

Centisome position: 47.31

GC content: 45.66

Gene sequence:

>1347_bases
GTGAAAGAAACATCTAAAACAACGGCCGGATTACCGAAACTGTCATCCAATAAGATTTGGATGATGAGTCTAGGTTTTCT
CGGTGTTCAAATGGCATTTACACTTCAGAGCTCACAGATGAGCCGGATCTTCCAAACTTTAGGCGCGGATCCAAATAACC
TTGGCTGGTTTTTCATCTTGCCACCCCTTGCTGGTTTGATCGTTCAACCGATCATTGGGAGTTTATCCGACCGAACATGG
GCCCCACGTTTAGGCGGGCGACGGTTACCTTACTTGATTCTGGGAACAGTCGTTGCGGCAATCGTGATGTTACTACTACC
CAATTCTGGCTCGTTTGGATTTGGTTACGCTTCCATGGCGGCCTTAGTTTTTGGTGCGATTACCGTGGCATTTCTTGATT
TATCGTCTAACGTCGCAATGCAACCATTCAAGATGATGGTCGGGGATATGGTCAACGATGACCAAAAGAGTTACGCCTAT
GGGATTCAAAGCTTCTTGTTGAATACTGGTGCCGTCATTGCGGCAATCTTCCCATTCCTGTTGACCTTGTTCGGGGTCGC
CAATACGGCTAGTAAAGGTGTTATTCCCAATTCAGTGATCTGGTCATTTTATATTGGAGCAGCAATCTTAGTGGTTTCAA
CGATTATCACGATTGCCCGGGTGCGGGAATATGATCCCGTAACTTACGCGAAGTATCACGGCATTGATGAAAGCGCTAAT
AAATCTGGTGGTAACTGGTTGGCACTCTTGAAGAAAGCACCAAAGGTTTTCTGGTTAGTAGCCTTAGTTCAATTCTTCTG
CTGGATGGCATTTCAATACTTATGGACATACTCAACCGGTGCAATGGCTGCCAACGTTTGGCACACCACTAATGCCAGTT
CTGCAGGCTACCAAGCCGCTGGTAACTGGTACGGGATCTTATCTGCTGTTCAGTCCGTTGCCGCGGTTGTTTGGTCATAT
GTTTTAGCCAAGGTTCCGAATAATCGGCATAAACTTGGTTATGCTTTGAGTTTATTACTTGGTGCAATTGGCTTCTTCTC
AATTTTCTTCATTCACAGTCAATCAGCACTTGTCGTCTCATTTATTCTGGTTGGGATGGCCTGGGCCGCAATGAATACGT
ATCCATTGACGATGGTAACCAACGCCTTATCTGGCGAACACATGGGGACTTACTTGGGTCTCTTTAACGGCTCAATCTGC
CTGCCACAAATTGTTGCGTCCTTATTGAGCTTTGCATTATATCCATTATTTGGCAATTCACAAGCCAACATGTTCATCTT
TGCTGGGATCGTCCTTGCAGTAGGTGCGGGCACAGTTGGTTTGATCAAAGAAACGTACAAAAACTAG

Upstream 100 bases:

>100_bases
CCTTCATGCAATTTCACGCAAACGCTTGCATAATTTTGAAAGCGGTTTTATAATCTAACTTGTACTCAAGCGATTGATAT
TATTTTTGGGAGGCTTTATT

Downstream 100 bases:

>100_bases
GAGGAATTAACTTATGAAACGAATTTTTGATGTTAATCCATGGCATGTCTTGACGACTGATTTCAAACCAGAAAACAAAC
GGCTGCAAGAATCAATGACT

Product: sugar transport protein (putative)

Products: NA

Alternate protein names: Sugar Transporter; Transporter Facilitator Family; Facilitator Superfamily Permease; Facilitator Superfamily Protein; SugarCation Symporter; Facilitator Superfamily Transporter Permease; MFS Superfamily Sugcific Permease; Cytoplasmic Membrane Maltose Transporter MalY; Transport Protein Facilitator Superfamily Protein; Facilitator Superfamily Transmembrane Protein; Facilitator Family Transporter; Sucrose Transporter Protein; Permeases Of Facilitator Superfamily

Number of amino acids: Translated: 448; Mature: 448

Protein sequence:

>448_residues
MKETSKTTAGLPKLSSNKIWMMSLGFLGVQMAFTLQSSQMSRIFQTLGADPNNLGWFFILPPLAGLIVQPIIGSLSDRTW
APRLGGRRLPYLILGTVVAAIVMLLLPNSGSFGFGYASMAALVFGAITVAFLDLSSNVAMQPFKMMVGDMVNDDQKSYAY
GIQSFLLNTGAVIAAIFPFLLTLFGVANTASKGVIPNSVIWSFYIGAAILVVSTIITIARVREYDPVTYAKYHGIDESAN
KSGGNWLALLKKAPKVFWLVALVQFFCWMAFQYLWTYSTGAMAANVWHTTNASSAGYQAAGNWYGILSAVQSVAAVVWSY
VLAKVPNNRHKLGYALSLLLGAIGFFSIFFIHSQSALVVSFILVGMAWAAMNTYPLTMVTNALSGEHMGTYLGLFNGSIC
LPQIVASLLSFALYPLFGNSQANMFIFAGIVLAVGAGTVGLIKETYKN

Sequences:

>Translated_448_residues
MKETSKTTAGLPKLSSNKIWMMSLGFLGVQMAFTLQSSQMSRIFQTLGADPNNLGWFFILPPLAGLIVQPIIGSLSDRTW
APRLGGRRLPYLILGTVVAAIVMLLLPNSGSFGFGYASMAALVFGAITVAFLDLSSNVAMQPFKMMVGDMVNDDQKSYAY
GIQSFLLNTGAVIAAIFPFLLTLFGVANTASKGVIPNSVIWSFYIGAAILVVSTIITIARVREYDPVTYAKYHGIDESAN
KSGGNWLALLKKAPKVFWLVALVQFFCWMAFQYLWTYSTGAMAANVWHTTNASSAGYQAAGNWYGILSAVQSVAAVVWSY
VLAKVPNNRHKLGYALSLLLGAIGFFSIFFIHSQSALVVSFILVGMAWAAMNTYPLTMVTNALSGEHMGTYLGLFNGSIC
LPQIVASLLSFALYPLFGNSQANMFIFAGIVLAVGAGTVGLIKETYKN
>Mature_448_residues
MKETSKTTAGLPKLSSNKIWMMSLGFLGVQMAFTLQSSQMSRIFQTLGADPNNLGWFFILPPLAGLIVQPIIGSLSDRTW
APRLGGRRLPYLILGTVVAAIVMLLLPNSGSFGFGYASMAALVFGAITVAFLDLSSNVAMQPFKMMVGDMVNDDQKSYAY
GIQSFLLNTGAVIAAIFPFLLTLFGVANTASKGVIPNSVIWSFYIGAAILVVSTIITIARVREYDPVTYAKYHGIDESAN
KSGGNWLALLKKAPKVFWLVALVQFFCWMAFQYLWTYSTGAMAANVWHTTNASSAGYQAAGNWYGILSAVQSVAAVVWSY
VLAKVPNNRHKLGYALSLLLGAIGFFSIFFIHSQSALVVSFILVGMAWAAMNTYPLTMVTNALSGEHMGTYLGLFNGSIC
LPQIVASLLSFALYPLFGNSQANMFIFAGIVLAVGAGTVGLIKETYKN

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48336; Mature: 48336

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKETSKTTAGLPKLSSNKIWMMSLGFLGVQMAFTLQSSQMSRIFQTLGADPNNLGWFFIL
CCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEH
PPLAGLIVQPIIGSLSDRTWAPRLGGRRLPYLILGTVVAAIVMLLLPNSGSFGFGYASMA
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
ALVFGAITVAFLDLSSNVAMQPFKMMVGDMVNDDQKSYAYGIQSFLLNTGAVIAAIFPFL
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH
LTLFGVANTASKGVIPNSVIWSFYIGAAILVVSTIITIARVREYDPVTYAKYHGIDESAN
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCC
KSGGNWLALLKKAPKVFWLVALVQFFCWMAFQYLWTYSTGAMAANVWHTTNASSAGYQAA
CCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCC
GNWYGILSAVQSVAAVVWSYVLAKVPNNRHKLGYALSLLLGAIGFFSIFFIHSQSALVVS
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
FILVGMAWAAMNTYPLTMVTNALSGEHMGTYLGLFNGSICLPQIVASLLSFALYPLFGNS
HHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCC
QANMFIFAGIVLAVGAGTVGLIKETYKN
CCCHHHHHHHHHHHCCCHHHHHHHHHCC
>Mature Secondary Structure
MKETSKTTAGLPKLSSNKIWMMSLGFLGVQMAFTLQSSQMSRIFQTLGADPNNLGWFFIL
CCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEH
PPLAGLIVQPIIGSLSDRTWAPRLGGRRLPYLILGTVVAAIVMLLLPNSGSFGFGYASMA
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
ALVFGAITVAFLDLSSNVAMQPFKMMVGDMVNDDQKSYAYGIQSFLLNTGAVIAAIFPFL
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH
LTLFGVANTASKGVIPNSVIWSFYIGAAILVVSTIITIARVREYDPVTYAKYHGIDESAN
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCC
KSGGNWLALLKKAPKVFWLVALVQFFCWMAFQYLWTYSTGAMAANVWHTTNASSAGYQAA
CCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCC
GNWYGILSAVQSVAAVVWSYVLAKVPNNRHKLGYALSLLLGAIGFFSIFFIHSQSALVVS
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
FILVGMAWAAMNTYPLTMVTNALSGEHMGTYLGLFNGSICLPQIVASLLSFALYPLFGNS
HHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCC
QANMFIFAGIVLAVGAGTVGLIKETYKN
CCCHHHHHHHHHHHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA