| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is 28378410
Identifier: 28378410
GI number: 28378410
Start: 1565021
End: 1566367
Strand: Direct
Name: 28378410
Synonym: lp_1729
Alternate gene names: NA
Gene position: 1565021-1566367 (Clockwise)
Preceding gene: 28378409
Following gene: 28378411
Centisome position: 47.31
GC content: 45.66
Gene sequence:
>1347_bases GTGAAAGAAACATCTAAAACAACGGCCGGATTACCGAAACTGTCATCCAATAAGATTTGGATGATGAGTCTAGGTTTTCT CGGTGTTCAAATGGCATTTACACTTCAGAGCTCACAGATGAGCCGGATCTTCCAAACTTTAGGCGCGGATCCAAATAACC TTGGCTGGTTTTTCATCTTGCCACCCCTTGCTGGTTTGATCGTTCAACCGATCATTGGGAGTTTATCCGACCGAACATGG GCCCCACGTTTAGGCGGGCGACGGTTACCTTACTTGATTCTGGGAACAGTCGTTGCGGCAATCGTGATGTTACTACTACC CAATTCTGGCTCGTTTGGATTTGGTTACGCTTCCATGGCGGCCTTAGTTTTTGGTGCGATTACCGTGGCATTTCTTGATT TATCGTCTAACGTCGCAATGCAACCATTCAAGATGATGGTCGGGGATATGGTCAACGATGACCAAAAGAGTTACGCCTAT GGGATTCAAAGCTTCTTGTTGAATACTGGTGCCGTCATTGCGGCAATCTTCCCATTCCTGTTGACCTTGTTCGGGGTCGC CAATACGGCTAGTAAAGGTGTTATTCCCAATTCAGTGATCTGGTCATTTTATATTGGAGCAGCAATCTTAGTGGTTTCAA CGATTATCACGATTGCCCGGGTGCGGGAATATGATCCCGTAACTTACGCGAAGTATCACGGCATTGATGAAAGCGCTAAT AAATCTGGTGGTAACTGGTTGGCACTCTTGAAGAAAGCACCAAAGGTTTTCTGGTTAGTAGCCTTAGTTCAATTCTTCTG CTGGATGGCATTTCAATACTTATGGACATACTCAACCGGTGCAATGGCTGCCAACGTTTGGCACACCACTAATGCCAGTT CTGCAGGCTACCAAGCCGCTGGTAACTGGTACGGGATCTTATCTGCTGTTCAGTCCGTTGCCGCGGTTGTTTGGTCATAT GTTTTAGCCAAGGTTCCGAATAATCGGCATAAACTTGGTTATGCTTTGAGTTTATTACTTGGTGCAATTGGCTTCTTCTC AATTTTCTTCATTCACAGTCAATCAGCACTTGTCGTCTCATTTATTCTGGTTGGGATGGCCTGGGCCGCAATGAATACGT ATCCATTGACGATGGTAACCAACGCCTTATCTGGCGAACACATGGGGACTTACTTGGGTCTCTTTAACGGCTCAATCTGC CTGCCACAAATTGTTGCGTCCTTATTGAGCTTTGCATTATATCCATTATTTGGCAATTCACAAGCCAACATGTTCATCTT TGCTGGGATCGTCCTTGCAGTAGGTGCGGGCACAGTTGGTTTGATCAAAGAAACGTACAAAAACTAG
Upstream 100 bases:
>100_bases CCTTCATGCAATTTCACGCAAACGCTTGCATAATTTTGAAAGCGGTTTTATAATCTAACTTGTACTCAAGCGATTGATAT TATTTTTGGGAGGCTTTATT
Downstream 100 bases:
>100_bases GAGGAATTAACTTATGAAACGAATTTTTGATGTTAATCCATGGCATGTCTTGACGACTGATTTCAAACCAGAAAACAAAC GGCTGCAAGAATCAATGACT
Product: sugar transport protein (putative)
Products: NA
Alternate protein names: Sugar Transporter; Transporter Facilitator Family; Facilitator Superfamily Permease; Facilitator Superfamily Protein; SugarCation Symporter; Facilitator Superfamily Transporter Permease; MFS Superfamily Sugcific Permease; Cytoplasmic Membrane Maltose Transporter MalY; Transport Protein Facilitator Superfamily Protein; Facilitator Superfamily Transmembrane Protein; Facilitator Family Transporter; Sucrose Transporter Protein; Permeases Of Facilitator Superfamily
Number of amino acids: Translated: 448; Mature: 448
Protein sequence:
>448_residues MKETSKTTAGLPKLSSNKIWMMSLGFLGVQMAFTLQSSQMSRIFQTLGADPNNLGWFFILPPLAGLIVQPIIGSLSDRTW APRLGGRRLPYLILGTVVAAIVMLLLPNSGSFGFGYASMAALVFGAITVAFLDLSSNVAMQPFKMMVGDMVNDDQKSYAY GIQSFLLNTGAVIAAIFPFLLTLFGVANTASKGVIPNSVIWSFYIGAAILVVSTIITIARVREYDPVTYAKYHGIDESAN KSGGNWLALLKKAPKVFWLVALVQFFCWMAFQYLWTYSTGAMAANVWHTTNASSAGYQAAGNWYGILSAVQSVAAVVWSY VLAKVPNNRHKLGYALSLLLGAIGFFSIFFIHSQSALVVSFILVGMAWAAMNTYPLTMVTNALSGEHMGTYLGLFNGSIC LPQIVASLLSFALYPLFGNSQANMFIFAGIVLAVGAGTVGLIKETYKN
Sequences:
>Translated_448_residues MKETSKTTAGLPKLSSNKIWMMSLGFLGVQMAFTLQSSQMSRIFQTLGADPNNLGWFFILPPLAGLIVQPIIGSLSDRTW APRLGGRRLPYLILGTVVAAIVMLLLPNSGSFGFGYASMAALVFGAITVAFLDLSSNVAMQPFKMMVGDMVNDDQKSYAY GIQSFLLNTGAVIAAIFPFLLTLFGVANTASKGVIPNSVIWSFYIGAAILVVSTIITIARVREYDPVTYAKYHGIDESAN KSGGNWLALLKKAPKVFWLVALVQFFCWMAFQYLWTYSTGAMAANVWHTTNASSAGYQAAGNWYGILSAVQSVAAVVWSY VLAKVPNNRHKLGYALSLLLGAIGFFSIFFIHSQSALVVSFILVGMAWAAMNTYPLTMVTNALSGEHMGTYLGLFNGSIC LPQIVASLLSFALYPLFGNSQANMFIFAGIVLAVGAGTVGLIKETYKN >Mature_448_residues MKETSKTTAGLPKLSSNKIWMMSLGFLGVQMAFTLQSSQMSRIFQTLGADPNNLGWFFILPPLAGLIVQPIIGSLSDRTW APRLGGRRLPYLILGTVVAAIVMLLLPNSGSFGFGYASMAALVFGAITVAFLDLSSNVAMQPFKMMVGDMVNDDQKSYAY GIQSFLLNTGAVIAAIFPFLLTLFGVANTASKGVIPNSVIWSFYIGAAILVVSTIITIARVREYDPVTYAKYHGIDESAN KSGGNWLALLKKAPKVFWLVALVQFFCWMAFQYLWTYSTGAMAANVWHTTNASSAGYQAAGNWYGILSAVQSVAAVVWSY VLAKVPNNRHKLGYALSLLLGAIGFFSIFFIHSQSALVVSFILVGMAWAAMNTYPLTMVTNALSGEHMGTYLGLFNGSIC LPQIVASLLSFALYPLFGNSQANMFIFAGIVLAVGAGTVGLIKETYKN
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48336; Mature: 48336
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKETSKTTAGLPKLSSNKIWMMSLGFLGVQMAFTLQSSQMSRIFQTLGADPNNLGWFFIL CCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEH PPLAGLIVQPIIGSLSDRTWAPRLGGRRLPYLILGTVVAAIVMLLLPNSGSFGFGYASMA HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH ALVFGAITVAFLDLSSNVAMQPFKMMVGDMVNDDQKSYAYGIQSFLLNTGAVIAAIFPFL HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH LTLFGVANTASKGVIPNSVIWSFYIGAAILVVSTIITIARVREYDPVTYAKYHGIDESAN HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCC KSGGNWLALLKKAPKVFWLVALVQFFCWMAFQYLWTYSTGAMAANVWHTTNASSAGYQAA CCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCC GNWYGILSAVQSVAAVVWSYVLAKVPNNRHKLGYALSLLLGAIGFFSIFFIHSQSALVVS CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH FILVGMAWAAMNTYPLTMVTNALSGEHMGTYLGLFNGSICLPQIVASLLSFALYPLFGNS HHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCC QANMFIFAGIVLAVGAGTVGLIKETYKN CCCHHHHHHHHHHHCCCHHHHHHHHHCC >Mature Secondary Structure MKETSKTTAGLPKLSSNKIWMMSLGFLGVQMAFTLQSSQMSRIFQTLGADPNNLGWFFIL CCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEH PPLAGLIVQPIIGSLSDRTWAPRLGGRRLPYLILGTVVAAIVMLLLPNSGSFGFGYASMA HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH ALVFGAITVAFLDLSSNVAMQPFKMMVGDMVNDDQKSYAYGIQSFLLNTGAVIAAIFPFL HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH LTLFGVANTASKGVIPNSVIWSFYIGAAILVVSTIITIARVREYDPVTYAKYHGIDESAN HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCC KSGGNWLALLKKAPKVFWLVALVQFFCWMAFQYLWTYSTGAMAANVWHTTNASSAGYQAA CCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCC GNWYGILSAVQSVAAVVWSYVLAKVPNNRHKLGYALSLLLGAIGFFSIFFIHSQSALVVS CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH FILVGMAWAAMNTYPLTMVTNALSGEHMGTYLGLFNGSICLPQIVASLLSFALYPLFGNS HHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCC QANMFIFAGIVLAVGAGTVGLIKETYKN CCCHHHHHHHHHHHCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA