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The map label for this gene is yecD [C]

Identifier: 28378351

GI number: 28378351

Start: 1513373

End: 1513912

Strand: Direct

Name: yecD [C]

Synonym: lp_1659

Alternate gene names: 28378351

Gene position: 1513373-1513912 (Clockwise)

Preceding gene: 28378350

Following gene: 28378352

Centisome position: 45.75

GC content: 46.67

Gene sequence:

>540_bases
ATGGCGGATGTACTGATTATTATTGATATGCAAGTTGGTGTCTGTCGCGGGTCCCAACCGGTTACCAATTTGGCAACCGT
GATTGCGGGTATTCAACAACGCATTACGAGTTATCGGGCTCAAAATAAGCCAATCGTGTTTGTGCAACATCACGATGCTG
ACTTAGTCACTGGTTCTGCCGATTGGCAGATGATACCAGAGTTGCCAATTGAAGCAACCGATATTGTGGTCCAGAAAACG
CACGCCAACGCTTTTTATCACACGGATTTACAAGCCCAATTGACGGCGATTGGATGTCAAACACTTGAAATCTGTGGTGC
GCAAGTCGAGTTTTGTGTGGATACGACGGTTAAAATGGCTCATGGGTTAGGCTACCACCTCGAAATGGTTCGGGGGCTGA
CGACAACGACGGCCAATTCCATGATGAGTGCGCAACAAACGATTGATTTTTATCAAGATCGGATTTGGAACCACCGTTTC
TTGACGTTGGTAACAGCATCGGGCCGTATTGACGATTTGTTAGAAAAGACGGGTGATTAG

Upstream 100 bases:

>100_bases
GATAATGTGCTAGTCTAAAAACAGCTTACTGCTTTGTGGGCGTCGTTAATAATAGTTGACGCTAACCAAGCCAGTTAAAT
TAATTTACGGAGGGGTCAAC

Downstream 100 bases:

>100_bases
TTGAAAGCATTATTTTTTAATGATTTTGGCGATGCGTCGGTCCTACAGTACGGTGAGGTGGCGGACCCAATCGTTACTGC
AAATACTGTATTGGTTAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Isochorismatase Family Protein; Amidase; Isochorismatase; Acetyltransferase GNAT Family; Isochorismatase/Nicotamidase Family Hydrolase; Isochorismatase Protein; Hydrolase; 2 3-Dihydro-2 3-Dihydroxybenzoate Synthetase; Hydrolase Isochorismatase Family; Isochorismatase Hydrolase Protein; Acetyltransferase; Pyrimidine Utilization Protein B; Isochorismatase Family Hydrolase

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MADVLIIIDMQVGVCRGSQPVTNLATVIAGIQQRITSYRAQNKPIVFVQHHDADLVTGSADWQMIPELPIEATDIVVQKT
HANAFYHTDLQAQLTAIGCQTLEICGAQVEFCVDTTVKMAHGLGYHLEMVRGLTTTTANSMMSAQQTIDFYQDRIWNHRF
LTLVTASGRIDDLLEKTGD

Sequences:

>Translated_179_residues
MADVLIIIDMQVGVCRGSQPVTNLATVIAGIQQRITSYRAQNKPIVFVQHHDADLVTGSADWQMIPELPIEATDIVVQKT
HANAFYHTDLQAQLTAIGCQTLEICGAQVEFCVDTTVKMAHGLGYHLEMVRGLTTTTANSMMSAQQTIDFYQDRIWNHRF
LTLVTASGRIDDLLEKTGD
>Mature_178_residues
ADVLIIIDMQVGVCRGSQPVTNLATVIAGIQQRITSYRAQNKPIVFVQHHDADLVTGSADWQMIPELPIEATDIVVQKTH
ANAFYHTDLQAQLTAIGCQTLEICGAQVEFCVDTTVKMAHGLGYHLEMVRGLTTTTANSMMSAQQTIDFYQDRIWNHRFL
TLVTASGRIDDLLEKTGD

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19805; Mature: 19674

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADVLIIIDMQVGVCRGSQPVTNLATVIAGIQQRITSYRAQNKPIVFVQHHDADLVTGSA
CCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEECCC
DWQMIPELPIEATDIVVQKTHANAFYHTDLQAQLTAIGCQTLEICGAQVEFCVDTTVKMA
CCEECCCCCCCCHHEEEEEECCCEEEECCHHHHHHHHCHHHHHHCCCEEEEHHHHHHHHH
HGLGYHLEMVRGLTTTTANSMMSAQQTIDFYQDRIWNHRFLTLVTASGRIDDLLEKTGD
HCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHCCC
>Mature Secondary Structure 
ADVLIIIDMQVGVCRGSQPVTNLATVIAGIQQRITSYRAQNKPIVFVQHHDADLVTGSA
CCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEECCC
DWQMIPELPIEATDIVVQKTHANAFYHTDLQAQLTAIGCQTLEICGAQVEFCVDTTVKMA
CCEECCCCCCCCHHEEEEEECCCEEEECCHHHHHHHHCHHHHHHCCCEEEEHHHHHHHHH
HGLGYHLEMVRGLTTTTANSMMSAQQTIDFYQDRIWNHRFLTLVTASGRIDDLLEKTGD
HCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA