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The map label for this gene is recN [H]

Identifier: 28378306

GI number: 28378306

Start: 1459365

End: 1461059

Strand: Direct

Name: recN [H]

Synonym: lp_1605

Alternate gene names: 28378306

Gene position: 1459365-1461059 (Clockwise)

Preceding gene: 28378305

Following gene: 28378307

Centisome position: 44.11

GC content: 45.96

Gene sequence:

>1695_bases
GTGTTACAAGAATTATCAATTACGAACTTTGCAATTATCGAACACTTAGACATTGCTTTTGAAGCCGGCATGACGGTTTT
AACTGGTGAGACCGGTGCTGGTAAGTCAATTATTATTGATGCAGTCGGTTTATTAGCGGGTGGCCGCGGCTCGGCAGAGT
TTATTCGGACCGGTGCTGATAAAGCCGTTTTGCAAGGCATGTTTATTTTGCCGGCTGACGGCGTGACGGCCCAATTGTTG
GACGAAGCGGGGATCGAACATGCGGATAATACCGTCATTCTACAGCGCGAGATTACTAAAAGTGGCCGTAATACATGTCG
CATCAATGGTATGCTGGTCAATACGACGACTTTGAAACAGATTGGTGAAACAATTGTTGATATTCATGGTCAGAATGAAC
ATCAAGAGTTGATGCAACCTGAAAAACACCTGGGATTGCTGGACGAGTTTGCCACCGCTAAAATTCGTAAATTGAAGCAG
CGTTACCAGCAACAGTATGATCGTTATCAGCAGTTAAACCGTGAACTGCGGCAAAAGAATGCGAATGAAAAAGAGTGGGC
TCAACGCTTAGATATGCTGAACTTTCAAGTGGACGAAATCGCAGCAGCACAAGTCAAAGTGGGTGAAGAGGCCAGTTTGA
CTGCGGAACGTGACCGCTTGGATAATTACCAAATGATCAATCAAGCGCTTCAACAGAGTTACACATTGTTAGCTGCAGGT
GAGGAGACGACTGGTGCGGTTGATATGGTCGGTACGGCGATGAATGCACTAGAACCGATTGCTAATTTGGACCCCGCCTT
TAATGAGATTACCGTGAATGTCAAAAATGCCTTTTATGGGCTGCAGGACGCGGCCGGTCAGATTTCTAATCAGCTCGATT
TGCAAGAATTCGACGAGGGTCGCTTGGATGAAATCGAACAGCGGCTGGACGTTTTGGCCCAGTTAAAACGTAAGTATGGG
GACTCTGAACAACAAATCTTAGATTATTACCAAAAAATCGCGGCTGAGTTAGCCAAGATGACTGACTCTGAAGAAAATAG
TGAAGATTTGGCCCAGCGGGTCGCCGATCTGAAACAACAACTACTTACGACGGGCGAAGCGTTGTCCGATAAACGGCGGG
CTGCGGCGAAAGTGTTACAACGACAGATCCATCAAGAACTCAAAGATCTGTATATGGATAAGGCAATCTTTGAAGTACGA
TTCAAACCGACTAAGGGTCAGATCTATCGGAGTGGTCTGGACAGTGTTGAATTTTATATTCAGACTAATCCTGGTGAGCG
CATGCGCCCATTGGCTAAAATTGCGTCTGGTGGGGAACTCTCACGGATGATGCTGGCTTTGAAAACCATTTTTTCTGAAT
CACAGGGAATTACCAGTATCATTTTTGACGAAGTTGATACGGGCGTTAGCGGTCGGGTTGCTCAAGCGATTGCTGAGAAA
ATCAATGGTATTGCACACTTTTCACAAGTGCTCTGTATTACCCATTTGCCACAGGTTGCGGCGATGAGTGATCACCACTA
CTTCATTGCCAAGAAGATTACTGGTAAACGCACGAAAACGAGTGTGACTAAGCTGGATAATGCGGCCCGGGTTCAAGAAC
TGGCACGCATGTTGGCGGGAACTAAAGTCACTAAGTTATCGCTTGAACATGCGGAAGAGTTATTGCGACTGGCCGATGAG
GAAAAAGATGATTAA

Upstream 100 bases:

>100_bases
AGTAAGCTATCTTCGACCTGCTCACATGTGTGTCAGGTCGCTTTTTTTCAAAATTAACTAACGGATGCTGGTAACCAATT
GCTTTTAAGGAGGGCTTGCA

Downstream 100 bases:

>100_bases
GCTTAATTGATCGGTACCACAAGGGACGGACAACTATGGTCGGTCCTTTTTTGATGGTGTTAATTAGTGACGATAGTGTC
GAGTGAGGTTTCGGTATTAT

Product: DNA repair protein RecN

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 564; Mature: 564

Protein sequence:

>564_residues
MLQELSITNFAIIEHLDIAFEAGMTVLTGETGAGKSIIIDAVGLLAGGRGSAEFIRTGADKAVLQGMFILPADGVTAQLL
DEAGIEHADNTVILQREITKSGRNTCRINGMLVNTTTLKQIGETIVDIHGQNEHQELMQPEKHLGLLDEFATAKIRKLKQ
RYQQQYDRYQQLNRELRQKNANEKEWAQRLDMLNFQVDEIAAAQVKVGEEASLTAERDRLDNYQMINQALQQSYTLLAAG
EETTGAVDMVGTAMNALEPIANLDPAFNEITVNVKNAFYGLQDAAGQISNQLDLQEFDEGRLDEIEQRLDVLAQLKRKYG
DSEQQILDYYQKIAAELAKMTDSEENSEDLAQRVADLKQQLLTTGEALSDKRRAAAKVLQRQIHQELKDLYMDKAIFEVR
FKPTKGQIYRSGLDSVEFYIQTNPGERMRPLAKIASGGELSRMMLALKTIFSESQGITSIIFDEVDTGVSGRVAQAIAEK
INGIAHFSQVLCITHLPQVAAMSDHHYFIAKKITGKRTKTSVTKLDNAARVQELARMLAGTKVTKLSLEHAEELLRLADE
EKDD

Sequences:

>Translated_564_residues
MLQELSITNFAIIEHLDIAFEAGMTVLTGETGAGKSIIIDAVGLLAGGRGSAEFIRTGADKAVLQGMFILPADGVTAQLL
DEAGIEHADNTVILQREITKSGRNTCRINGMLVNTTTLKQIGETIVDIHGQNEHQELMQPEKHLGLLDEFATAKIRKLKQ
RYQQQYDRYQQLNRELRQKNANEKEWAQRLDMLNFQVDEIAAAQVKVGEEASLTAERDRLDNYQMINQALQQSYTLLAAG
EETTGAVDMVGTAMNALEPIANLDPAFNEITVNVKNAFYGLQDAAGQISNQLDLQEFDEGRLDEIEQRLDVLAQLKRKYG
DSEQQILDYYQKIAAELAKMTDSEENSEDLAQRVADLKQQLLTTGEALSDKRRAAAKVLQRQIHQELKDLYMDKAIFEVR
FKPTKGQIYRSGLDSVEFYIQTNPGERMRPLAKIASGGELSRMMLALKTIFSESQGITSIIFDEVDTGVSGRVAQAIAEK
INGIAHFSQVLCITHLPQVAAMSDHHYFIAKKITGKRTKTSVTKLDNAARVQELARMLAGTKVTKLSLEHAEELLRLADE
EKDD
>Mature_564_residues
MLQELSITNFAIIEHLDIAFEAGMTVLTGETGAGKSIIIDAVGLLAGGRGSAEFIRTGADKAVLQGMFILPADGVTAQLL
DEAGIEHADNTVILQREITKSGRNTCRINGMLVNTTTLKQIGETIVDIHGQNEHQELMQPEKHLGLLDEFATAKIRKLKQ
RYQQQYDRYQQLNRELRQKNANEKEWAQRLDMLNFQVDEIAAAQVKVGEEASLTAERDRLDNYQMINQALQQSYTLLAAG
EETTGAVDMVGTAMNALEPIANLDPAFNEITVNVKNAFYGLQDAAGQISNQLDLQEFDEGRLDEIEQRLDVLAQLKRKYG
DSEQQILDYYQKIAAELAKMTDSEENSEDLAQRVADLKQQLLTTGEALSDKRRAAAKVLQRQIHQELKDLYMDKAIFEVR
FKPTKGQIYRSGLDSVEFYIQTNPGERMRPLAKIASGGELSRMMLALKTIFSESQGITSIIFDEVDTGVSGRVAQAIAEK
INGIAHFSQVLCITHLPQVAAMSDHHYFIAKKITGKRTKTSVTKLDNAARVQELARMLAGTKVTKLSLEHAEELLRLADE
EKDD

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=557, Percent_Identity=35.7271095152603, Blast_Score=333, Evalue=2e-92,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 62827; Mature: 62827

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQELSITNFAIIEHLDIAFEAGMTVLTGETGAGKSIIIDAVGLLAGGRGSAEFIRTGAD
CCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHCCCCCCHHHHHCCCC
KAVLQGMFILPADGVTAQLLDEAGIEHADNTVILQREITKSGRNTCRINGMLVNTTTLKQ
HHHHCCEEEECCCCCHHHHHHHHCCCCCCCEEEEEEHHHHCCCCEEEEEEEEECHHHHHH
IGETIVDIHGQNEHQELMQPEKHLGLLDEFATAKIRKLKQRYQQQYDRYQQLNRELRQKN
HHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ANEKEWAQRLDMLNFQVDEIAAAQVKVGEEASLTAERDRLDNYQMINQALQQSYTLLAAG
CCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECC
EETTGAVDMVGTAMNALEPIANLDPAFNEITVNVKNAFYGLQDAAGQISNQLDLQEFDEG
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCHHHCCCC
RLDEIEQRLDVLAQLKRKYGDSEQQILDYYQKIAAELAKMTDSEENSEDLAQRVADLKQQ
CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
LLTTGEALSDKRRAAAKVLQRQIHQELKDLYMDKAIFEVRFKPTKGQIYRSGLDSVEFYI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHCCCCCEEEEE
QTNPGERMRPLAKIASGGELSRMMLALKTIFSESQGITSIIFDEVDTGVSGRVAQAIAEK
ECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHH
INGIAHFSQVLCITHLPQVAAMSDHHYFIAKKITGKRTKTSVTKLDNAARVQELARMLAG
HHHHHHHHHHHHHHHCCHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCC
TKVTKLSLEHAEELLRLADEEKDD
CHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLQELSITNFAIIEHLDIAFEAGMTVLTGETGAGKSIIIDAVGLLAGGRGSAEFIRTGAD
CCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHCCCCCCHHHHHCCCC
KAVLQGMFILPADGVTAQLLDEAGIEHADNTVILQREITKSGRNTCRINGMLVNTTTLKQ
HHHHCCEEEECCCCCHHHHHHHHCCCCCCCEEEEEEHHHHCCCCEEEEEEEEECHHHHHH
IGETIVDIHGQNEHQELMQPEKHLGLLDEFATAKIRKLKQRYQQQYDRYQQLNRELRQKN
HHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ANEKEWAQRLDMLNFQVDEIAAAQVKVGEEASLTAERDRLDNYQMINQALQQSYTLLAAG
CCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECC
EETTGAVDMVGTAMNALEPIANLDPAFNEITVNVKNAFYGLQDAAGQISNQLDLQEFDEG
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCHHHCCCC
RLDEIEQRLDVLAQLKRKYGDSEQQILDYYQKIAAELAKMTDSEENSEDLAQRVADLKQQ
CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
LLTTGEALSDKRRAAAKVLQRQIHQELKDLYMDKAIFEVRFKPTKGQIYRSGLDSVEFYI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHCCCCCEEEEE
QTNPGERMRPLAKIASGGELSRMMLALKTIFSESQGITSIIFDEVDTGVSGRVAQAIAEK
ECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHH
INGIAHFSQVLCITHLPQVAAMSDHHYFIAKKITGKRTKTSVTKLDNAARVQELARMLAG
HHHHHHHHHHHHHHHCCHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCC
TKVTKLSLEHAEELLRLADEEKDD
CHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]