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The map label for this gene is 28378292

Identifier: 28378292

GI number: 28378292

Start: 1449868

End: 1450497

Strand: Direct

Name: 28378292

Synonym: lp_1591

Alternate gene names: NA

Gene position: 1449868-1450497 (Clockwise)

Preceding gene: 28378291

Following gene: 28378293

Centisome position: 43.83

GC content: 44.13

Gene sequence:

>630_bases
ATGAGTCATGAAGTTGATCCGCGTGTCGATAAAACTCGGCGGCGCTTGCGACAAGCATTAATTACACTATTACAGACAGA
AACAGTCGATAACATTTCCGTGCAAAAACTGACTAGTACGGCAGCAGTTACCCGCGGAACATTTTATCTCCACTATAAAG
ACAAGCCAGCATTTGTTGATCAGGCCCTAGATGACTTGGTAAGTGAATTATTTGAAACGGCCATCGTGACGGTTTCAGTG
GGTGATATTATGACCAATCCGGCTGACCCGTTACAGCGGGTGCATGTTTTTTCCTTATCAAAGGCACTCAGTTACATCAG
TCAGCACGCGGAAGCCTTTGAGACGCTATTGTTAGATCAGCGCCAGTTAGCGGTCAATCAACGGATCAATCAGCAGATGA
CGACGTGGATGACGAAATTTCACCGTGATTTTCAGGATCAATTTGCTGATTTGGAAGTACCGGTCAGCATTCAAATCGCG
TATTACGTTTCTGCGACAGTCGGCCTGATTACTGATTGGCTAGCTAATGATATGATCTACACGCCACATTACTTAACCAA
GTGTATTAAAAAAATGCACCATTTGATGACGGTAGGGAGCATTAGTTTCACGGACTTTTTTGTGAAGTGA

Upstream 100 bases:

>100_bases
CTTAGACGTAATCTAACTATTTGTCCGGCTGATTATCATCTGTTAGACGCTCTTAGCAATTAATGTTATATTAATTATGA
AATGAAAGTAGGGAGCAGAT

Downstream 100 bases:

>100_bases
AATCAATCCTTGACTATTATGAAAAAATTTGATAATATTTTCCTGTTGTATTTGTGGACTTCTACAGCTACAACCGCACG
GATTGAGTCTTAAGATCAGC

Product: transcription regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator TetR Family; Transcription Regulator; TetR Family Regulatory Protein; Regulatory Protein; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MSHEVDPRVDKTRRRLRQALITLLQTETVDNISVQKLTSTAAVTRGTFYLHYKDKPAFVDQALDDLVSELFETAIVTVSV
GDIMTNPADPLQRVHVFSLSKALSYISQHAEAFETLLLDQRQLAVNQRINQQMTTWMTKFHRDFQDQFADLEVPVSIQIA
YYVSATVGLITDWLANDMIYTPHYLTKCIKKMHHLMTVGSISFTDFFVK

Sequences:

>Translated_209_residues
MSHEVDPRVDKTRRRLRQALITLLQTETVDNISVQKLTSTAAVTRGTFYLHYKDKPAFVDQALDDLVSELFETAIVTVSV
GDIMTNPADPLQRVHVFSLSKALSYISQHAEAFETLLLDQRQLAVNQRINQQMTTWMTKFHRDFQDQFADLEVPVSIQIA
YYVSATVGLITDWLANDMIYTPHYLTKCIKKMHHLMTVGSISFTDFFVK
>Mature_208_residues
SHEVDPRVDKTRRRLRQALITLLQTETVDNISVQKLTSTAAVTRGTFYLHYKDKPAFVDQALDDLVSELFETAIVTVSVG
DIMTNPADPLQRVHVFSLSKALSYISQHAEAFETLLLDQRQLAVNQRINQQMTTWMTKFHRDFQDQFADLEVPVSIQIAY
YVSATVGLITDWLANDMIYTPHYLTKCIKKMHHLMTVGSISFTDFFVK

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23974; Mature: 23843

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHEVDPRVDKTRRRLRQALITLLQTETVDNISVQKLTSTAAVTRGTFYLHYKDKPAFVD
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEEECCCCHHHH
QALDDLVSELFETAIVTVSVGDIMTNPADPLQRVHVFSLSKALSYISQHAEAFETLLLDQ
HHHHHHHHHHHHHHHHEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQLAVNQRINQQMTTWMTKFHRDFQDQFADLEVPVSIQIAYYVSATVGLITDWLANDMIY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCEE
TPHYLTKCIKKMHHLMTVGSISFTDFFVK
CCHHHHHHHHHHHHHHHHCCCHHHHHHCC
>Mature Secondary Structure 
SHEVDPRVDKTRRRLRQALITLLQTETVDNISVQKLTSTAAVTRGTFYLHYKDKPAFVD
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEEECCCCHHHH
QALDDLVSELFETAIVTVSVGDIMTNPADPLQRVHVFSLSKALSYISQHAEAFETLLLDQ
HHHHHHHHHHHHHHHHEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQLAVNQRINQQMTTWMTKFHRDFQDQFADLEVPVSIQIAYYVSATVGLITDWLANDMIY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCEE
TPHYLTKCIKKMHHLMTVGSISFTDFFVK
CCHHHHHHHHHHHHHHHHCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA