Definition Lactobacillus plantarum WCFS1, complete genome.
Accession NC_004567
Length 3,308,274

Click here to switch to the map view.

The map label for this gene is yqhL [H]

Identifier: 28378280

GI number: 28378280

Start: 1440601

End: 1441014

Strand: Direct

Name: yqhL [H]

Synonym: lp_1576

Alternate gene names: 28378280

Gene position: 1440601-1441014 (Clockwise)

Preceding gene: 28378279

Following gene: 28378282

Centisome position: 43.55

GC content: 43.0

Gene sequence:

>414_bases
GTGGTTTTAGGTGCATTGAGCGGCATGGCGTATGTTAACATCGTGTTAGTTATCATAATCGCGGCCTACTTTATTTATGA
GTTGTATAGTTACATTCGACGGCGTCAGGTGTCTACGATGTTGGACGAAGAAGCGTTTCAGGCGGGAATGCGTAAAGCAC
AAGTGATTGATTTGCGTGAAAAGAAAGAGTTTGACGCTGGTCATATTCTGGGGGCTCGGAATATTCCGTTCAACAGTTTG
AAAGTTCGGATGAACGAACTTCGCAAGGATATGCCAATCTACGTTTACGATCAAACCCATACGTTAAGTACACGGGCCGT
CGTTACATTAGCTAAGAATGGTTATTCACAGCTATACATTTTAAAACCCGGTTACGCACGTTGGGAAGGTAAGACGAAAA
AAGCGAAGTATTAA

Upstream 100 bases:

>100_bases
CAGGATTAGTCAGCAGTTTAATCGCGGCTTTTCCTGCTTACCCCTAGTAAAAGTAAGCGGTTTTGTGTAAAATAGATAAG
TAGAAATTAGGAGGGATAAC

Downstream 100 bases:

>100_bases
AAAATGGCGGCTAGAACAACAACTTGTTCGGCCACCATTTTTTATTTAATTAACCGTTGTGAGCTGAGCGACTCTTGCGC
ATCGCCTTTTTCCGGTTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MVLGALSGMAYVNIVLVIIIAAYFIYELYSYIRRRQVSTMLDEEAFQAGMRKAQVIDLREKKEFDAGHILGARNIPFNSL
KVRMNELRKDMPIYVYDQTHTLSTRAVVTLAKNGYSQLYILKPGYARWEGKTKKAKY

Sequences:

>Translated_137_residues
MVLGALSGMAYVNIVLVIIIAAYFIYELYSYIRRRQVSTMLDEEAFQAGMRKAQVIDLREKKEFDAGHILGARNIPFNSL
KVRMNELRKDMPIYVYDQTHTLSTRAVVTLAKNGYSQLYILKPGYARWEGKTKKAKY
>Mature_137_residues
MVLGALSGMAYVNIVLVIIIAAYFIYELYSYIRRRQVSTMLDEEAFQAGMRKAQVIDLREKKEFDAGHILGARNIPFNSL
KVRMNELRKDMPIYVYDQTHTLSTRAVVTLAKNGYSQLYILKPGYARWEGKTKKAKY

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763 [H]

Pfam domain/function: PF00581 Rhodanese [H]

EC number: NA

Molecular weight: Translated: 15820; Mature: 15820

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLGALSGMAYVNIVLVIIIAAYFIYELYSYIRRRQVSTMLDEEAFQAGMRKAQVIDLRE
CEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCHH
KKEFDAGHILGARNIPFNSLKVRMNELRKDMPIYVYDQTHTLSTRAVVTLAKNGYSQLYI
HCCCCCCCEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHEEEEECCCCCEEEE
LKPGYARWEGKTKKAKY
ECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVLGALSGMAYVNIVLVIIIAAYFIYELYSYIRRRQVSTMLDEEAFQAGMRKAQVIDLRE
CEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCHH
KKEFDAGHILGARNIPFNSLKVRMNELRKDMPIYVYDQTHTLSTRAVVTLAKNGYSQLYI
HCCCCCCCEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHEEEEECCCCCEEEE
LKPGYARWEGKTKKAKY
ECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]