| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is yqhL [H]
Identifier: 28378280
GI number: 28378280
Start: 1440601
End: 1441014
Strand: Direct
Name: yqhL [H]
Synonym: lp_1576
Alternate gene names: 28378280
Gene position: 1440601-1441014 (Clockwise)
Preceding gene: 28378279
Following gene: 28378282
Centisome position: 43.55
GC content: 43.0
Gene sequence:
>414_bases GTGGTTTTAGGTGCATTGAGCGGCATGGCGTATGTTAACATCGTGTTAGTTATCATAATCGCGGCCTACTTTATTTATGA GTTGTATAGTTACATTCGACGGCGTCAGGTGTCTACGATGTTGGACGAAGAAGCGTTTCAGGCGGGAATGCGTAAAGCAC AAGTGATTGATTTGCGTGAAAAGAAAGAGTTTGACGCTGGTCATATTCTGGGGGCTCGGAATATTCCGTTCAACAGTTTG AAAGTTCGGATGAACGAACTTCGCAAGGATATGCCAATCTACGTTTACGATCAAACCCATACGTTAAGTACACGGGCCGT CGTTACATTAGCTAAGAATGGTTATTCACAGCTATACATTTTAAAACCCGGTTACGCACGTTGGGAAGGTAAGACGAAAA AAGCGAAGTATTAA
Upstream 100 bases:
>100_bases CAGGATTAGTCAGCAGTTTAATCGCGGCTTTTCCTGCTTACCCCTAGTAAAAGTAAGCGGTTTTGTGTAAAATAGATAAG TAGAAATTAGGAGGGATAAC
Downstream 100 bases:
>100_bases AAAATGGCGGCTAGAACAACAACTTGTTCGGCCACCATTTTTTATTTAATTAACCGTTGTGAGCTGAGCGACTCTTGCGC ATCGCCTTTTTCCGGTTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MVLGALSGMAYVNIVLVIIIAAYFIYELYSYIRRRQVSTMLDEEAFQAGMRKAQVIDLREKKEFDAGHILGARNIPFNSL KVRMNELRKDMPIYVYDQTHTLSTRAVVTLAKNGYSQLYILKPGYARWEGKTKKAKY
Sequences:
>Translated_137_residues MVLGALSGMAYVNIVLVIIIAAYFIYELYSYIRRRQVSTMLDEEAFQAGMRKAQVIDLREKKEFDAGHILGARNIPFNSL KVRMNELRKDMPIYVYDQTHTLSTRAVVTLAKNGYSQLYILKPGYARWEGKTKKAKY >Mature_137_residues MVLGALSGMAYVNIVLVIIIAAYFIYELYSYIRRRQVSTMLDEEAFQAGMRKAQVIDLREKKEFDAGHILGARNIPFNSL KVRMNELRKDMPIYVYDQTHTLSTRAVVTLAKNGYSQLYILKPGYARWEGKTKKAKY
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 rhodanese domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001763 [H]
Pfam domain/function: PF00581 Rhodanese [H]
EC number: NA
Molecular weight: Translated: 15820; Mature: 15820
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLGALSGMAYVNIVLVIIIAAYFIYELYSYIRRRQVSTMLDEEAFQAGMRKAQVIDLRE CEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCHH KKEFDAGHILGARNIPFNSLKVRMNELRKDMPIYVYDQTHTLSTRAVVTLAKNGYSQLYI HCCCCCCCEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHEEEEECCCCCEEEE LKPGYARWEGKTKKAKY ECCCCCCCCCCCCCCCC >Mature Secondary Structure MVLGALSGMAYVNIVLVIIIAAYFIYELYSYIRRRQVSTMLDEEAFQAGMRKAQVIDLRE CEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCHH KKEFDAGHILGARNIPFNSLKVRMNELRKDMPIYVYDQTHTLSTRAVVTLAKNGYSQLYI HCCCCCCCEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHEEEEECCCCCEEEE LKPGYARWEGKTKKAKY ECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]