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The map label for this gene is yneR [H]

Identifier: 28378272

GI number: 28378272

Start: 1431090

End: 1431590

Strand: Direct

Name: yneR [H]

Synonym: lp_1566

Alternate gene names: 28378272

Gene position: 1431090-1431590 (Clockwise)

Preceding gene: 28378269

Following gene: 28378274

Centisome position: 43.26

GC content: 42.71

Gene sequence:

>501_bases
ATGTTCACTTGCATGGGTTTCACCTCCTTAAGTAGTTTAAGTACACCACAAAACAATGACGCTGTAAATAAAGACTCCCT
TAGCGGTCATTTCAGGAACGCAACTGGTCATTGGCTTGCTCATCGACTGTCAATGTTGCGTTTTATGGGCAAAAAGGGCA
CAATTACTGTAAACGATTTCAATGATGAGGTGTTAGTAATGAAAATAACAATTACAGATTTGGCCAGTAAGTGGTTTCAT
GATGACATGGGTGTAACCACTGGTAATGGGGTGCGCTTTTACGGCAAAACTTATGGCAAGACAGCAGTTCACAGTGGCTT
CTCAATCGGGATCATGCGTGATGACGAACCCCATCAACCGATTGCCATGGTTGAAAAGGATGGTGTCAATTACTATGTCA
ACGACCGTGATGAATGGTTCTTTAAGGGCTATGATCTCACAGTTGATTATGATGAACAAAATGACGGCCCGAAGTATGAC
TACACGCCCAATAACGAGTAG

Upstream 100 bases:

>100_bases
TGAAAGATTTTTGAGAGCAGCAGTGAGGGCGGCCGTTTCGGGGTAGTCGACTGGAACATGCAGTGTGACGGTTGGAATTG
AGGTGTCGGGCTCCGTTTCA

Downstream 100 bases:

>100_bases
TTCTGGTGAGTGCTTGCCAATAGCGATTAATATTTGGACAAAAAATCAGCGTTGCCTGAATTAACAATTCAGGTAACGCT
GATTTTTGCTGACCACATCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MFTCMGFTSLSSLSTPQNNDAVNKDSLSGHFRNATGHWLAHRLSMLRFMGKKGTITVNDFNDEVLVMKITITDLASKWFH
DDMGVTTGNGVRFYGKTYGKTAVHSGFSIGIMRDDEPHQPIAMVEKDGVNYYVNDRDEWFFKGYDLTVDYDEQNDGPKYD
YTPNNE

Sequences:

>Translated_166_residues
MFTCMGFTSLSSLSTPQNNDAVNKDSLSGHFRNATGHWLAHRLSMLRFMGKKGTITVNDFNDEVLVMKITITDLASKWFH
DDMGVTTGNGVRFYGKTYGKTAVHSGFSIGIMRDDEPHQPIAMVEKDGVNYYVNDRDEWFFKGYDLTVDYDEQNDGPKYD
YTPNNE
>Mature_166_residues
MFTCMGFTSLSSLSTPQNNDAVNKDSLSGHFRNATGHWLAHRLSMLRFMGKKGTITVNDFNDEVLVMKITITDLASKWFH
DDMGVTTGNGVRFYGKTYGKTAVHSGFSIGIMRDDEPHQPIAMVEKDGVNYYVNDRDEWFFKGYDLTVDYDEQNDGPKYD
YTPNNE

Specific function: Unknown

COG id: COG4841

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesB/iscA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000361
- InterPro:   IPR008326 [H]

Pfam domain/function: PF01521 Fe-S_biosyn [H]

EC number: NA

Molecular weight: Translated: 18875; Mature: 18875

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTCMGFTSLSSLSTPQNNDAVNKDSLSGHFRNATGHWLAHRLSMLRFMGKKGTITVNDF
CEEECCCCCHHCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHCCCCCEEEEECC
NDEVLVMKITITDLASKWFHDDMGVTTGNGVRFYGKTYGKTAVHSGFSIGIMRDDEPHQP
CCCEEEEEEEHHHHHHHHHHCCCCEEECCCEEEECCCCCCHHHCCCEEEEEECCCCCCCC
IAMVEKDGVNYYVNDRDEWFFKGYDLTVDYDEQNDGPKYDYTPNNE
EEEEEECCCEEEECCCCCEEEECEEEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFTCMGFTSLSSLSTPQNNDAVNKDSLSGHFRNATGHWLAHRLSMLRFMGKKGTITVNDF
CEEECCCCCHHCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHCCCCCEEEEECC
NDEVLVMKITITDLASKWFHDDMGVTTGNGVRFYGKTYGKTAVHSGFSIGIMRDDEPHQP
CCCEEEEEEEHHHHHHHHHHCCCCEEECCCEEEECCCCCCHHHCCCEEEEEECCCCCCCC
IAMVEKDGVNYYVNDRDEWFFKGYDLTVDYDEQNDGPKYDYTPNNE
EEEEEECCCEEEECCCCCEEEECEEEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969507; 9384377 [H]