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The map label for this gene is yrjE [H]

Identifier: 28378221

GI number: 28378221

Start: 1377522

End: 1378238

Strand: Direct

Name: yrjE [H]

Synonym: lp_1507

Alternate gene names: 28378221

Gene position: 1377522-1378238 (Clockwise)

Preceding gene: 28378220

Following gene: 28378222

Centisome position: 41.64

GC content: 45.75

Gene sequence:

>717_bases
ATGAACAATTTTCAAAATGACCCACAACCACGGACCATCAACACACAAGTTGGCCTCCGTAGTTTCCTAACTAAAATGTA
TGGGTTTATGACAATCGCCGTGTTAGTTTCGGCCTTTACCGTTTACTTAGCGATGACCACGTTCCAAGCACAAATTAATG
CCGCCTTTTCACAACACCCATTCATCTTCTTGATGATCTTCATTGTCAGCATGTTTGTGATGATTGGTGGAATTCAAGTC
AACGCGACACGCAATCCAGCGATGAGCTTCACCTTACTGATGCTCTTTGCCATCATCTTTGGGGTTGAAATGTCAGTGAC
CTTGTCCTTATACACGGGTGCCGTTATCACCGGTGCGTTCGTTGCAGCTGGAGCTGTATTTGCGACCATGGCGGTGATTG
GGACGACGACTAAGCGTGATATTTCACGTATTGGGACGCACTTGATTGCAGCCTTGATCGGGTTGTTTGTCGCTTCACTG
GTCAATATGTTCTTACAAAGTGCCATGATTAGTTACATCTTTTCATACATTGGTGTATTGATCTTCGCCGGCTTATCCAT
GTGGGACGCTAACCGGATGCGCAACATGTATTTGCAATATGGTGACCAGGTTTCATCGACTGGTTTGGCCGTTACTGGGG
CCTTACAATTATACTTGGACTTCGTTAACTTGTTCCTCTACTTCGTCCAAATCTTCGGTGGCTCAAGCCGCGACTAA

Upstream 100 bases:

>100_bases
ACTAGCGCAGTCCGCGTTAGTAACGATGCACAAACTCAATTTTTAATCTTAACTCGGAAAAAGTAACGAGTAGTCAATTT
TTAGGTGAAAGAGGGATTTT

Downstream 100 bases:

>100_bases
TCATTAAGATAATTATTAAGGATTATGTCCAAGATGTCATAATCCTTTTAATTTACCGAAAATGAGTTATTTCACGGGTT
TTCGGTGGACCGAACTCCCG

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MNNFQNDPQPRTINTQVGLRSFLTKMYGFMTIAVLVSAFTVYLAMTTFQAQINAAFSQHPFIFLMIFIVSMFVMIGGIQV
NATRNPAMSFTLLMLFAIIFGVEMSVTLSLYTGAVITGAFVAAGAVFATMAVIGTTTKRDISRIGTHLIAALIGLFVASL
VNMFLQSAMISYIFSYIGVLIFAGLSMWDANRMRNMYLQYGDQVSSTGLAVTGALQLYLDFVNLFLYFVQIFGGSSRD

Sequences:

>Translated_238_residues
MNNFQNDPQPRTINTQVGLRSFLTKMYGFMTIAVLVSAFTVYLAMTTFQAQINAAFSQHPFIFLMIFIVSMFVMIGGIQV
NATRNPAMSFTLLMLFAIIFGVEMSVTLSLYTGAVITGAFVAAGAVFATMAVIGTTTKRDISRIGTHLIAALIGLFVASL
VNMFLQSAMISYIFSYIGVLIFAGLSMWDANRMRNMYLQYGDQVSSTGLAVTGALQLYLDFVNLFLYFVQIFGGSSRD
>Mature_238_residues
MNNFQNDPQPRTINTQVGLRSFLTKMYGFMTIAVLVSAFTVYLAMTTFQAQINAAFSQHPFIFLMIFIVSMFVMIGGIQV
NATRNPAMSFTLLMLFAIIFGVEMSVTLSLYTGAVITGAFVAAGAVFATMAVIGTTTKRDISRIGTHLIAALIGLFVASL
VNMFLQSAMISYIFSYIGVLIFAGLSMWDANRMRNMYLQYGDQVSSTGLAVTGALQLYLDFVNLFLYFVQIFGGSSRD

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BI1 family [H]

Homologues:

Organism=Escherichia coli, GI1787004, Length=237, Percent_Identity=33.7552742616034, Blast_Score=127, Evalue=8e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006214 [H]

Pfam domain/function: PF01027 UPF0005 [H]

EC number: NA

Molecular weight: Translated: 26147; Mature: 26147

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.7 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.7 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNFQNDPQPRTINTQVGLRSFLTKMYGFMTIAVLVSAFTVYLAMTTFQAQINAAFSQHP
CCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
FIFLMIFIVSMFVMIGGIQVNATRNPAMSFTLLMLFAIIFGVEMSVTLSLYTGAVITGAF
HHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
VAAGAVFATMAVIGTTTKRDISRIGTHLIAALIGLFVASLVNMFLQSAMISYIFSYIGVL
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFAGLSMWDANRMRNMYLQYGDQVSSTGLAVTGALQLYLDFVNLFLYFVQIFGGSSRD
HHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNNFQNDPQPRTINTQVGLRSFLTKMYGFMTIAVLVSAFTVYLAMTTFQAQINAAFSQHP
CCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
FIFLMIFIVSMFVMIGGIQVNATRNPAMSFTLLMLFAIIFGVEMSVTLSLYTGAVITGAF
HHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
VAAGAVFATMAVIGTTTKRDISRIGTHLIAALIGLFVASLVNMFLQSAMISYIFSYIGVL
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFAGLSMWDANRMRNMYLQYGDQVSSTGLAVTGALQLYLDFVNLFLYFVQIFGGSSRD
HHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]