| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is 28378154
Identifier: 28378154
GI number: 28378154
Start: 1308569
End: 1308706
Strand: Direct
Name: 28378154
Synonym: lp_1428
Alternate gene names: NA
Gene position: 1308569-1308706 (Clockwise)
Preceding gene: 28378152
Following gene: 28378155
Centisome position: 39.55
GC content: 43.48
Gene sequence:
>138_bases GTGGCCACAGATCAATCCGGTCAAGTTTCGAAGACAGTAACGTTACCACAAACGAGCGAGAATCACCAGAGCTTGCTCAT TGCAATACTTGGACTTGCCTTATTGTTGTTGATGCTTGTATGGTTACCAGCTAAATAA
Upstream 100 bases:
>100_bases CCATGAAGATACTCCTTAAAGTTAATTTAGTAAAAAGACTAATGGCTTAATTTTAGAGATTTTGGGGGTCAACGTCAATT TGTTTTTTAACTACTAGCTT
Downstream 100 bases:
>100_bases GTTATTGTTTGACTGAAATTAGAATGCAATGGATTTAGAGTTATACAGTGGGTTTTCAGAAATTATGAAGGCCCATTTTT GTGAGCTTAAATGAATTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 45; Mature: 44
Protein sequence:
>45_residues MATDQSGQVSKTVTLPQTSENHQSLLIAILGLALLLLMLVWLPAK
Sequences:
>Translated_45_residues MATDQSGQVSKTVTLPQTSENHQSLLIAILGLALLLLMLVWLPAK >Mature_44_residues ATDQSGQVSKTVTLPQTSENHQSLLIAILGLALLLLMLVWLPAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4845; Mature: 4714
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATDQSGQVSKTVTLPQTSENHQSLLIAILGLALLLLMLVWLPAK CCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ATDQSGQVSKTVTLPQTSENHQSLLIAILGLALLLLMLVWLPAK CCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA