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The map label for this gene is 28378143

Identifier: 28378143

GI number: 28378143

Start: 1295072

End: 1295416

Strand: Direct

Name: 28378143

Synonym: lp_1415

Alternate gene names: NA

Gene position: 1295072-1295416 (Clockwise)

Preceding gene: 28378142

Following gene: 28378144

Centisome position: 39.15

GC content: 36.81

Gene sequence:

>345_bases
ATGGCCGTAAATATTTACGATACTGCGAACCAATTGGAACAAGAATTACGTCAGACTAAAGAATTCAAGGAATTAAAGGT
CGCTTATGACACGATGAAGACCAATGACAGTGCCTTTTCACTGTTTAAGGACTTTCAAGAAGTTCAGATGCAATTGTCAC
AAAAGCAGATGAATGGGGAAGAATTGACGGATGACGAAGTTCAAAAGGCCCATGATTTAGCTGATAAGGTTGGCAACGTT
GACGAAATTAAGTCCTTAATGGGTAAAGAACGTAACTTGAACCAATTGATGAATGATTTAAATCAAATTATCACTAAACC
AGTTCAAGCATTATACCAGAACTAA

Upstream 100 bases:

>100_bases
TGGCAACTAGTAAAGCTAGCTTCTGAACGTACTAATGCTATTCAAGTTCCGTTAAAAATGCTAAAATAATGACGACACAT
ACTTCGAGGAGGAACTCACG

Downstream 100 bases:

>100_bases
GTAAATTAAGGATCGAGGGGCAATGACGGAATCTGTTCCGTGATTGCCCCTTTTTTAGTGGGGGTTATCATGAAATTTCT
ACACGCGGCAGATTTACATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MAVNIYDTANQLEQELRQTKEFKELKVAYDTMKTNDSAFSLFKDFQEVQMQLSQKQMNGEELTDDEVQKAHDLADKVGNV
DEIKSLMGKERNLNQLMNDLNQIITKPVQALYQN

Sequences:

>Translated_114_residues
MAVNIYDTANQLEQELRQTKEFKELKVAYDTMKTNDSAFSLFKDFQEVQMQLSQKQMNGEELTDDEVQKAHDLADKVGNV
DEIKSLMGKERNLNQLMNDLNQIITKPVQALYQN
>Mature_113_residues
AVNIYDTANQLEQELRQTKEFKELKVAYDTMKTNDSAFSLFKDFQEVQMQLSQKQMNGEELTDDEVQKAHDLADKVGNVD
EIKSLMGKERNLNQLMNDLNQIITKPVQALYQN

Specific function: Unknown

COG id: COG3679

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0342 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1415_LACPL (Q88X33)

Other databases:

- EMBL:   AL935256
- RefSeq:   NP_785035.1
- ProteinModelPortal:   Q88X33
- SMR:   Q88X33
- GeneID:   1062474
- GenomeReviews:   AL935263_GR
- KEGG:   lpl:lp_1415
- NMPDR:   fig|220668.1.peg.1169
- HOGENOM:   HBG499075
- OMA:   ISRMIND
- ProtClustDB:   PRK13676
- BioCyc:   LPLA220668:LP_1415-MONOMER
- HAMAP:   MF_01526
- InterPro:   IPR010368

Pfam domain/function: PF06133 DUF964

EC number: NA

Molecular weight: Translated: 13217; Mature: 13086

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVNIYDTANQLEQELRQTKEFKELKVAYDTMKTNDSAFSLFKDFQEVQMQLSQKQMNGE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC
ELTDDEVQKAHDLADKVGNVDEIKSLMGKERNLNQLMNDLNQIITKPVQALYQN
CCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AVNIYDTANQLEQELRQTKEFKELKVAYDTMKTNDSAFSLFKDFQEVQMQLSQKQMNGE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC
ELTDDEVQKAHDLADKVGNVDEIKSLMGKERNLNQLMNDLNQIITKPVQALYQN
CCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12566566