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The map label for this gene is argR1

Identifier: 28378140

GI number: 28378140

Start: 1291897

End: 1292358

Strand: Direct

Name: argR1

Synonym: lp_1411

Alternate gene names: 28378140

Gene position: 1291897-1292358 (Clockwise)

Preceding gene: 28378139

Following gene: 28378141

Centisome position: 39.05

GC content: 45.89

Gene sequence:

>462_bases
ATGAAAAAGTCAGAGCGCCAAGCAGTTATCGAACAATTAATTAGTGAATATCCGATCGCTACCCAGGAAGAATTGATGGC
TAAGCTTAAAGCAGAGGGCATTGCTGCGACGCAAGCGACGATTTCGCGCGATATCCGAGAGATGCAGATCGTTAAGACGC
CGGATGAGCACGGTCAGACGCGGTACGCGATTTTTAAAACAACTAACAAAAATGAACAGGACCGGCTATTTGAAACGCTA
CACGATGTGGTCACGAGCATTGACCGTGTTGAATTCATGAATATTATTCATACGCTACCGAGTAATGGGAATCTATTGGC
GGCGATCATTGATGATTTGAACTTGCCAGAAGTGAGTGGGACCTTGGCTGGTCACGACACGATCTTTGTCGTGAGTCCGA
ATACGACGGTGGCAAAGCAGCTATACGAATCCTTTGCTAGTCACATTAGTAATGAAGACTGA

Upstream 100 bases:

>100_bases
ATAGTGGCGGAAAATGTGCTTTTTGAAGTTCTGTGCGTAGTTTGCCAAGTGAATATTTGCTATAATGTATTCATTACAAG
ATTTGGGGAGGTTTCGCGAC

Downstream 100 bases:

>100_bases
CTGTGGTGAGCAGTCTAATTGGTTGCACTAAGCCGTCGTTCACGGTATGATTATTGTCATCAAAAGAGGTGTGAGATATG
AAATATACGAAGAAACGGGC

Product: arginine catabolic regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MKKSERQAVIEQLISEYPIATQEELMAKLKAEGIAATQATISRDIREMQIVKTPDEHGQTRYAIFKTTNKNEQDRLFETL
HDVVTSIDRVEFMNIIHTLPSNGNLLAAIIDDLNLPEVSGTLAGHDTIFVVSPNTTVAKQLYESFASHISNED

Sequences:

>Translated_153_residues
MKKSERQAVIEQLISEYPIATQEELMAKLKAEGIAATQATISRDIREMQIVKTPDEHGQTRYAIFKTTNKNEQDRLFETL
HDVVTSIDRVEFMNIIHTLPSNGNLLAAIIDDLNLPEVSGTLAGHDTIFVVSPNTTVAKQLYESFASHISNED
>Mature_153_residues
MKKSERQAVIEQLISEYPIATQEELMAKLKAEGIAATQATISRDIREMQIVKTPDEHGQTRYAIFKTTNKNEQDRLFETL
HDVVTSIDRVEFMNIIHTLPSNGNLLAAIIDDLNLPEVSGTLAGHDTIFVVSPNTTVAKQLYESFASHISNED

Specific function: Regulates the transcription of the arc operon, involved in arginine catabolism

COG id: COG1438

COG function: function code K; Arginine repressor

Gene ontology:

Cell location: Cytoplasm (Probable)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ArgR family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ARGR1_LACPL (Q88X36)

Other databases:

- EMBL:   AL935256
- RefSeq:   NP_785032.1
- ProteinModelPortal:   Q88X36
- SMR:   Q88X36
- GeneID:   1062481
- GenomeReviews:   AL935263_GR
- KEGG:   lpl:lp_1411
- NMPDR:   fig|220668.1.peg.1166
- HOGENOM:   HBG697909
- OMA:   RDINELR
- ProtClustDB:   CLSK581382
- BioCyc:   LPLA220668:LP_1411-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00173
- InterPro:   IPR001669
- InterPro:   IPR020899
- InterPro:   IPR020900
- InterPro:   IPR011991
- Gene3D:   G3DSA:3.30.1360.40
- Gene3D:   G3DSA:1.10.10.10
- PRINTS:   PR01467
- ProDom:   PD007402
- TIGRFAMs:   TIGR01529

Pfam domain/function: PF01316 Arg_repressor; PF02863 Arg_repressor_C; SSF55252 Arg_repress

EC number: NA

Molecular weight: Translated: 17127; Mature: 17127

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSERQAVIEQLISEYPIATQEELMAKLKAEGIAATQATISRDIREMQIVKTPDEHGQT
CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEECCCCCCCE
RYAIFKTTNKNEQDRLFETLHDVVTSIDRVEFMNIIHTLPSNGNLLAAIIDDLNLPEVSG
EEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCC
TLAGHDTIFVVSPNTTVAKQLYESFASHISNED
CCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKKSERQAVIEQLISEYPIATQEELMAKLKAEGIAATQATISRDIREMQIVKTPDEHGQT
CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEECCCCCCCE
RYAIFKTTNKNEQDRLFETLHDVVTSIDRVEFMNIIHTLPSNGNLLAAIIDDLNLPEVSG
EEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCC
TLAGHDTIFVVSPNTTVAKQLYESFASHISNED
CCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12566566