Click here to switch to the map view.

The map label for this gene is 28378114

Identifier: 28378114

GI number: 28378114

Start: 1260939

End: 1262576

Strand: Direct

Name: 28378114

Synonym: lp_1377

Alternate gene names: NA

Gene position: 1260939-1262576 (Clockwise)

Preceding gene: 28378110

Following gene: 28378115

Centisome position: 38.11

GC content: 47.13

Gene sequence:

>1638_bases
ATGAGTCAAAGCTTATGGCAACGATTGTTTAATCACCGTCAACAAACGAAGCAGGCCGTATTAATTCTTGGGAGTGGCCG
TTCCGGAACATCGGTAATGACTAAGTGTGTTAATTTGATGGGCATTTCTCTCGGGACTGATAACCTGCTGGCACCTAGTA
AGCGGATCAATCCGAAAGGTTATTTTGAAAATAAAGATGTCATCAATATTCACAAGTCACTTGGAAGTCGCATCCGGTAC
CGGCCAGCCTTCAAGGATTACTATGATAGCCCGAAGATTAAAAAGGACCGGGCGGCGTTAACCACGTATCTACGAAACTT
TTTTGAGAATGAACAGTATCTGGCGATAAAAGACCCACGGATGAATGATTATATTGAATTGTGGCAACGTGTTTTGGCTG
ACGTTGAGGTTCAGCCGGCTGAAATCGTCTTGCTACGTAATCCGATGGACGTGGTCAATTCGAATGAGCGCGCCTGGCAC
CGTGATACCACGCTCGCAATGCGTCAGTGGCAAGTCCGGACGTTGCTTTCATTACGTGATACCGACCGTGAGCACCGCAT
TTTAGTCACGTACGAAGATTTGTTTGGTCAGACGTTGACGACGTTGAAACGAATCGCGACCCAATTTAACTTACCGTGGA
CGAGCGACGAGGCGGCACTCCAAGCGCAAATCGATGACTTCATCGATCCAGCACTCCAAAAGAGTGATAGCGGTGAAAAT
TTAGCTGATTTTGAAGCTCGAACGGACGTGAAACCCGATGTTAAGGCACTTTACTTACTAGGCCGTCAAGCTGCGGCTGA
CCCGGATTACTTTGCCTCGGCTGAATTTCAACAGCGCATCGACGAGATGACTGACGAGTATTTAGCCAAGTATGGCGCTT
TATATCGGGACTTTAACGTCAAGATCAATAGTAAAACGTTCTTTGTATTCGGCGAAGATCAGGCCCAAGTTGATCAGGTC
AACACGACTTTACGAAATGATCAAGTCAAGATGGTCGGCACAGAAGCTGACAGTCATGAGGTTGCTGAAGATTTGAGCGA
ACGGTTGAATAATAATACGATTGCCATTCAGACGTACCCCTTGGACTATTTAGTGGTCGAGCAAAAGGAAGCCCTGAACA
ATTATCTCCGTAAAAACGCGAAACGCGAGACGTTATGGGGGATTGGGGATGCTAAAAACAATGAAATCGTTGAAATGTTA
ACGACGGTCAGTGCCGAGTTAGGTGCGGATACGCATAACGTGGTGATTGCAGATGACTTAACGGCCATCACTGATGAACG
TGAGCGCCGATTAGCGATTCAACATTTAGTACGGACGTTGCACGCGGTTGAACAGCCACCATACTTGGTCCTGATGGCTG
ACGAACTGGGAACCCCTGCGTCGCAAAGTGCGGTGACGGCTTTTATTGCTGCTGAACCGACTAAGGCAGCACCATTACGA
GACGAACAGCCGGACGAAACGTTCAAGCTGCGGACCCCGCTAGACATGGATGAGGTGGCGGCAACTTTAACAGCGTTGTG
TCGACGTGCGAGTCAGGATGAGCAACAACAAGCCGCATTGAACCATTTTGTAAGTCTTAATTATGATGAAATTTTAAACG
TGAAAGGTGATCAATATGCAAACAGTGTACGGAATTAA

Upstream 100 bases:

>100_bases
AAGGGTACTTATTTTCACAATTGACTTGCTAGTATATTTGGTGAGCCCACTAGCGAAGTACCAAAGATCAAATAAATAAT
AATGATTAGGATGATGAAGA

Downstream 100 bases:

>100_bases
AGCTCATGGTGGTAAGTTAGTTAATCTAGAAGATTTTAGTGAAGCAACGCGTCAGGCTGCTGAGCAGCTGCCAAGTTTAA
CCATCAATAATTGGAATATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 545; Mature: 544

Protein sequence:

>545_residues
MSQSLWQRLFNHRQQTKQAVLILGSGRSGTSVMTKCVNLMGISLGTDNLLAPSKRINPKGYFENKDVINIHKSLGSRIRY
RPAFKDYYDSPKIKKDRAALTTYLRNFFENEQYLAIKDPRMNDYIELWQRVLADVEVQPAEIVLLRNPMDVVNSNERAWH
RDTTLAMRQWQVRTLLSLRDTDREHRILVTYEDLFGQTLTTLKRIATQFNLPWTSDEAALQAQIDDFIDPALQKSDSGEN
LADFEARTDVKPDVKALYLLGRQAAADPDYFASAEFQQRIDEMTDEYLAKYGALYRDFNVKINSKTFFVFGEDQAQVDQV
NTTLRNDQVKMVGTEADSHEVAEDLSERLNNNTIAIQTYPLDYLVVEQKEALNNYLRKNAKRETLWGIGDAKNNEIVEML
TTVSAELGADTHNVVIADDLTAITDERERRLAIQHLVRTLHAVEQPPYLVLMADELGTPASQSAVTAFIAAEPTKAAPLR
DEQPDETFKLRTPLDMDEVAATLTALCRRASQDEQQQAALNHFVSLNYDEILNVKGDQYANSVRN

Sequences:

>Translated_545_residues
MSQSLWQRLFNHRQQTKQAVLILGSGRSGTSVMTKCVNLMGISLGTDNLLAPSKRINPKGYFENKDVINIHKSLGSRIRY
RPAFKDYYDSPKIKKDRAALTTYLRNFFENEQYLAIKDPRMNDYIELWQRVLADVEVQPAEIVLLRNPMDVVNSNERAWH
RDTTLAMRQWQVRTLLSLRDTDREHRILVTYEDLFGQTLTTLKRIATQFNLPWTSDEAALQAQIDDFIDPALQKSDSGEN
LADFEARTDVKPDVKALYLLGRQAAADPDYFASAEFQQRIDEMTDEYLAKYGALYRDFNVKINSKTFFVFGEDQAQVDQV
NTTLRNDQVKMVGTEADSHEVAEDLSERLNNNTIAIQTYPLDYLVVEQKEALNNYLRKNAKRETLWGIGDAKNNEIVEML
TTVSAELGADTHNVVIADDLTAITDERERRLAIQHLVRTLHAVEQPPYLVLMADELGTPASQSAVTAFIAAEPTKAAPLR
DEQPDETFKLRTPLDMDEVAATLTALCRRASQDEQQQAALNHFVSLNYDEILNVKGDQYANSVRN
>Mature_544_residues
SQSLWQRLFNHRQQTKQAVLILGSGRSGTSVMTKCVNLMGISLGTDNLLAPSKRINPKGYFENKDVINIHKSLGSRIRYR
PAFKDYYDSPKIKKDRAALTTYLRNFFENEQYLAIKDPRMNDYIELWQRVLADVEVQPAEIVLLRNPMDVVNSNERAWHR
DTTLAMRQWQVRTLLSLRDTDREHRILVTYEDLFGQTLTTLKRIATQFNLPWTSDEAALQAQIDDFIDPALQKSDSGENL
ADFEARTDVKPDVKALYLLGRQAAADPDYFASAEFQQRIDEMTDEYLAKYGALYRDFNVKINSKTFFVFGEDQAQVDQVN
TTLRNDQVKMVGTEADSHEVAEDLSERLNNNTIAIQTYPLDYLVVEQKEALNNYLRKNAKRETLWGIGDAKNNEIVEMLT
TVSAELGADTHNVVIADDLTAITDERERRLAIQHLVRTLHAVEQPPYLVLMADELGTPASQSAVTAFIAAEPTKAAPLRD
EQPDETFKLRTPLDMDEVAATLTALCRRASQDEQQQAALNHFVSLNYDEILNVKGDQYANSVRN

Specific function: Unknown

COG id: COG3551

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62108; Mature: 61976

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQSLWQRLFNHRQQTKQAVLILGSGRSGTSVMTKCVNLMGISLGTDNLLAPSKRINPKG
CCHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
YFENKDVINIHKSLGSRIRYRPAFKDYYDSPKIKKDRAALTTYLRNFFENEQYLAIKDPR
CCCCCCHHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCC
MNDYIELWQRVLADVEVQPAEIVLLRNPMDVVNSNERAWHRDTTLAMRQWQVRTLLSLRD
CHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHC
TDREHRILVTYEDLFGQTLTTLKRIATQFNLPWTSDEAALQAQIDDFIDPALQKSDSGEN
CCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCHHHHCCCCCCC
LADFEARTDVKPDVKALYLLGRQAAADPDYFASAEFQQRIDEMTDEYLAKYGALYRDFNV
CHHCHHCCCCCCCHHHHHHHCCHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHEEEEEE
KINSKTFFVFGEDQAQVDQVNTTLRNDQVKMVGTEADSHEVAEDLSERLNNNTIAIQTYP
EECCEEEEEEECCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEEC
LDYLVVEQKEALNNYLRKNAKRETLWGIGDAKNNEIVEMLTTVSAELGADTHNVVIADDL
CCEEEECHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCC
TAITDERERRLAIQHLVRTLHAVEQPPYLVLMADELGTPASQSAVTAFIAAEPTKAAPLR
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHEEEEEECCCCCCCCCC
DEQPDETFKLRTPLDMDEVAATLTALCRRASQDEQQQAALNHFVSLNYDEILNVKGDQYA
CCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHCCCCCHHHH
NSVRN
HHHCC
>Mature Secondary Structure 
SQSLWQRLFNHRQQTKQAVLILGSGRSGTSVMTKCVNLMGISLGTDNLLAPSKRINPKG
CHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
YFENKDVINIHKSLGSRIRYRPAFKDYYDSPKIKKDRAALTTYLRNFFENEQYLAIKDPR
CCCCCCHHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCC
MNDYIELWQRVLADVEVQPAEIVLLRNPMDVVNSNERAWHRDTTLAMRQWQVRTLLSLRD
CHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHC
TDREHRILVTYEDLFGQTLTTLKRIATQFNLPWTSDEAALQAQIDDFIDPALQKSDSGEN
CCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCHHHHCCCCCCC
LADFEARTDVKPDVKALYLLGRQAAADPDYFASAEFQQRIDEMTDEYLAKYGALYRDFNV
CHHCHHCCCCCCCHHHHHHHCCHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHEEEEEE
KINSKTFFVFGEDQAQVDQVNTTLRNDQVKMVGTEADSHEVAEDLSERLNNNTIAIQTYP
EECCEEEEEEECCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEEC
LDYLVVEQKEALNNYLRKNAKRETLWGIGDAKNNEIVEMLTTVSAELGADTHNVVIADDL
CCEEEECHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCC
TAITDERERRLAIQHLVRTLHAVEQPPYLVLMADELGTPASQSAVTAFIAAEPTKAAPLR
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHEEEEEECCCCCCCCCC
DEQPDETFKLRTPLDMDEVAATLTALCRRASQDEQQQAALNHFVSLNYDEILNVKGDQYA
CCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHCCCCCHHHH
NSVRN
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA