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The map label for this gene is yidA [H]

Identifier: 28378095

GI number: 28378095

Start: 1242056

End: 1242877

Strand: Direct

Name: yidA [H]

Synonym: lp_1353

Alternate gene names: 28378095

Gene position: 1242056-1242877 (Clockwise)

Preceding gene: 28378093

Following gene: 28378096

Centisome position: 37.54

GC content: 46.11

Gene sequence:

>822_bases
ATGTATAAAATGATTGTTTGTGACTTGGATGAGACCCTGATGAATGACGATGGTACGTTGTCAGAAAAGAATGCGGCGGC
AATTCAAGCTGCGGCGGCTAAGGGTGTTTATTTTGTGCCGAATTCTGGTCGTAGTTATACCTCGTTTCAGAACGATTTGG
AGACGATGGGGTTGCGGGACCAACCACATCAATATTCGATTTCTTATAATGGTGGTTTGATTTTAGAGAATAAGGATAAT
CGGCCATTGGCGGTGAATGCCATGCCATATGAGGTTGCTAAAGGGGTGTTTGAAGCGGGAATTGCGAATCAGCAGGCGGC
GACGCATGTGTACACGCAGGATACGTTATATATTTACAATCCAGTTTCAAGTGATTCAGATTATCTACAAAACCGGGGCG
TGACGTTCACAACTATGACGACGCCGGACTTTGAACAATTCAAAACGATGAACGTCATGAAGATTATTATGGCCTTGCCA
ACGATGACTGACCGCAAGCAAATGCGCGCAGACGTTGAAGCTATTGTTGATCCAAGCAAATTAGCCGTCACTTATTCGTC
CGACCGTTACGTTGAGTTTAATCCGGCTGGCGTTGACAAGGGGACTGCAGCGGTTCAATTAGGAAAGCTACTGGGAATTA
CGGCGGATGAAATTATTGCAGCTGGCGATAACAGCAATGATCTCCCCATGCTGAAGGCGGTCGGATTGCCTGTGAGTGTC
GCCAATGGTATCGATGCAGTCAAGGCCGCAGCTAAGTACGTGACGGTCGCTGATAACAACCATGACGCGTTAGCAGAGGT
TATTAACAAGTTTATTTTATAG

Upstream 100 bases:

>100_bases
ATAAAGCGGTTGCATTTCCGCACGTCTTTCGCTAGAGTGGAATAGTAAACCTAAAATGACCAAGTTTCAGATGGTCAAGC
GGATGAGAGGGAACTTTAAT

Downstream 100 bases:

>100_bases
TACAAATTTTATTTAGAAAATGAAAGTTGCCATTTGGCGTTCAACTTTTACAAGTGGTATCATGATAATTGAAAATGTGG
TAGTATGAAATAAATTATTT

Product: HAD superfamily hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MYKMIVCDLDETLMNDDGTLSEKNAAAIQAAAAKGVYFVPNSGRSYTSFQNDLETMGLRDQPHQYSISYNGGLILENKDN
RPLAVNAMPYEVAKGVFEAGIANQQAATHVYTQDTLYIYNPVSSDSDYLQNRGVTFTTMTTPDFEQFKTMNVMKIIMALP
TMTDRKQMRADVEAIVDPSKLAVTYSSDRYVEFNPAGVDKGTAAVQLGKLLGITADEIIAAGDNSNDLPMLKAVGLPVSV
ANGIDAVKAAAKYVTVADNNHDALAEVINKFIL

Sequences:

>Translated_273_residues
MYKMIVCDLDETLMNDDGTLSEKNAAAIQAAAAKGVYFVPNSGRSYTSFQNDLETMGLRDQPHQYSISYNGGLILENKDN
RPLAVNAMPYEVAKGVFEAGIANQQAATHVYTQDTLYIYNPVSSDSDYLQNRGVTFTTMTTPDFEQFKTMNVMKIIMALP
TMTDRKQMRADVEAIVDPSKLAVTYSSDRYVEFNPAGVDKGTAAVQLGKLLGITADEIIAAGDNSNDLPMLKAVGLPVSV
ANGIDAVKAAAKYVTVADNNHDALAEVINKFIL
>Mature_273_residues
MYKMIVCDLDETLMNDDGTLSEKNAAAIQAAAAKGVYFVPNSGRSYTSFQNDLETMGLRDQPHQYSISYNGGLILENKDN
RPLAVNAMPYEVAKGVFEAGIANQQAATHVYTQDTLYIYNPVSSDSDYLQNRGVTFTTMTTPDFEQFKTMNVMKIIMALP
TMTDRKQMRADVEAIVDPSKLAVTYSSDRYVEFNPAGVDKGTAAVQLGKLLGITADEIIAAGDNSNDLPMLKAVGLPVSV
ANGIDAVKAAAKYVTVADNNHDALAEVINKFIL

Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates erythrose 4-phosphate and mannose 1-phosphate [H]

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=276, Percent_Identity=30.0724637681159, Blast_Score=104, Evalue=5e-24,
Organism=Escherichia coli, GI1786982, Length=276, Percent_Identity=23.9130434782609, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 29659; Mature: 29659

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKMIVCDLDETLMNDDGTLSEKNAAAIQAAAAKGVYFVPNSGRSYTSFQNDLETMGLRD
CCEEEEECCHHHHCCCCCCCCCCCHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHCCCCC
QPHQYSISYNGGLILENKDNRPLAVNAMPYEVAKGVFEAGIANQQAATHVYTQDTLYIYN
CCCEEEEEECCCEEEECCCCCCEEEECCCHHHHHHHHHHCCCCCCHHEEEEECCEEEEEC
PVSSDSDYLQNRGVTFTTMTTPDFEQFKTMNVMKIIMALPTMTDRKQMRADVEAIVDPSK
CCCCCHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC
LAVTYSSDRYVEFNPAGVDKGTAAVQLGKLLGITADEIIAAGDNSNDLPMLKAVGLPVSV
EEEEECCCCEEEECCCCCCCCHHHHHHHHHHCCCHHHEEEECCCCCCCCEEECCCCCEEH
ANGIDAVKAAAKYVTVADNNHDALAEVINKFIL
HCCHHHHHHHHEEEEEECCCHHHHHHHHHHHCC
>Mature Secondary Structure
MYKMIVCDLDETLMNDDGTLSEKNAAAIQAAAAKGVYFVPNSGRSYTSFQNDLETMGLRD
CCEEEEECCHHHHCCCCCCCCCCCHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHCCCCC
QPHQYSISYNGGLILENKDNRPLAVNAMPYEVAKGVFEAGIANQQAATHVYTQDTLYIYN
CCCEEEEEECCCEEEECCCCCCEEEECCCHHHHHHHHHHCCCCCCHHEEEEECCEEEEEC
PVSSDSDYLQNRGVTFTTMTTPDFEQFKTMNVMKIIMALPTMTDRKQMRADVEAIVDPSK
CCCCCHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC
LAVTYSSDRYVEFNPAGVDKGTAAVQLGKLLGITADEIIAAGDNSNDLPMLKAVGLPVSV
EEEEECCCCEEEECCCCCCCCHHHHHHHHHHCCCHHHEEEECCCCCCCCEEECCCCCEEH
ANGIDAVKAAAKYVTVADNNHDALAEVINKFIL
HCCHHHHHHHHEEEEEECCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]