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The map label for this gene is 28378060

Identifier: 28378060

GI number: 28378060

Start: 1203410

End: 1205044

Strand: Direct

Name: 28378060

Synonym: lp_1310

Alternate gene names: NA

Gene position: 1203410-1205044 (Clockwise)

Preceding gene: 28378059

Following gene: 28378061

Centisome position: 36.38

GC content: 40.98

Gene sequence:

>1635_bases
ATGCAAAAATCTACTGTCACCAAGCTTAAGCAAGCACTGATTGCAACTGGAAATTTGAAAGATTACGGTACAAGTACCGT
AACCTTGGCACTTTCGGTATCGGATCATCGACATCGGGCCCAAGTGCGATTCTATCGTTGCGATTCTTTCAAGCAAGCTT
GGATAGCAGTTGCACAACAATTAGCCAAAACCCCTCAAGCGAGTTGGGTTCGATTAGAAGCAGTTCAATCAACACAGAAG
TTACCAAGAGAAACTTTTGAAAAGCGATTGGCAGCTACTTTTCGGATGAACTATTGGCGATACGGTATTAGTTTTGATGC
AGATTTCAAGACAGCCTTATTGGAGATGGAAAGTAATGGACAAGCATTTTTCCGTCCTAGCAAAGCGCATCGAATTGGTA
AGAATCGTTCGGGTTCTTGGGTCGACTATGATCGAGTAGAGCCGTATCTTAACAAGCGTGAAGGAGCGCTACCAGTCGAT
ATTCGAAAGACAGAAAATGTTTGGGTCTTTACAACCGCTGGTGTATTTACTGACGGGCAGAAAATCTGGAATCTATCTGA
GCAAGAGGATTGTGGTAAGGGCGTTCGGGTGGTGACTGACGAGCAGAGCGAGCTGCAATCAGCTATTGAACATGGTGAAA
CTTTCCTAATTAATCAGTTAAAAGACAATGGAAAATTTGTCTACGGTTATTTTCCGGCTCGTCAAAGAGTTCTTAGCAAT
TACAATGTTGTGCGGCATTTTTCGTCCTTATATGCCTTGCTGGAAGCCATTCCATTCACAAAGCGCACTGAAAATTGTGC
AAAAGTTAAGTTAGCGATTCAGTGGGGCTTAAAAAATGCCACGATTGAAAAAGAGGGCGCAATCTTCGTCGATGATAATG
GCGAGCTAAAGTTGGGTGGACAGGCCTTATTAATACTTGCATTGAGTAAATATCAAGACGTTACCAAGGATGATACTTTC
ATGCCAGTTTTAATGAAAGCTTTTAAAGGCGTCCATTTCTTCCAAGAACCGTCTGGTAAGTTAATTCATGTCCTAAATCC
AGATTTAACGGTCAAAGCAGCTTATCGAATTATCTATTATGAAGGAGAAGTCGCATTTGCGCTTTCCCGACTATATGAGT
TAACACATGATAAGAATGTGATGGATCTGGTGAAGCAAATCTTGGATTACATGGTGGCTAATGACTACGGTAAATACCAT
GATCACTGGATTTCTTATGCAATCAATGAAGCATTACTGGTATTCCCAGACAATCGTGATTATATGAAACTGGGTTTGAA
AAATGTATTCAGTCATCTAAAATTCATTGAAGAGCGTGATACCACGTATCCAACATTACTTGAGTTAGTTGATGCGGCCG
TCAAAATGACCGATATGATTAAACGTTCAGGTAATGAAGACTTGATAGCACCTTATGACTTGGTTCGTTTACGGCAGGTA
TTGCGGTATCGTGCGTTGTATGAGATTACTACTGGGTGTTTTCTACCTGAGATTGCAATGTATCTCTATAATCCACAGAA
GTTCATTGGTGGGTTCTATGCACGTCATGACAATTTCCGGACACGGATTGACGATTGTGAACACTTCTTATCTGGGTTGA
TCAACTATTATAACTACACATATCGACAAGCATAA

Upstream 100 bases:

>100_bases
ACTGCTAACGATATACGTTGTAAAATAAGACTATTAACCAAAACGGGCGTGAAGCCCGTTTTGGCGTACATAAAAGAAAA
TTGAAAGAGGTAAGACTAAG

Downstream 100 bases:

>100_bases
TACTAGGTAACAGAAAGGGTGACTGTATGTTTTACTTCATTAATGAATATATTTTAGGCAAGAATTCGAGTGTTGAGCAC
GCGGCAATCAACCGGGTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 544; Mature: 544

Protein sequence:

>544_residues
MQKSTVTKLKQALIATGNLKDYGTSTVTLALSVSDHRHRAQVRFYRCDSFKQAWIAVAQQLAKTPQASWVRLEAVQSTQK
LPRETFEKRLAATFRMNYWRYGISFDADFKTALLEMESNGQAFFRPSKAHRIGKNRSGSWVDYDRVEPYLNKREGALPVD
IRKTENVWVFTTAGVFTDGQKIWNLSEQEDCGKGVRVVTDEQSELQSAIEHGETFLINQLKDNGKFVYGYFPARQRVLSN
YNVVRHFSSLYALLEAIPFTKRTENCAKVKLAIQWGLKNATIEKEGAIFVDDNGELKLGGQALLILALSKYQDVTKDDTF
MPVLMKAFKGVHFFQEPSGKLIHVLNPDLTVKAAYRIIYYEGEVAFALSRLYELTHDKNVMDLVKQILDYMVANDYGKYH
DHWISYAINEALLVFPDNRDYMKLGLKNVFSHLKFIEERDTTYPTLLELVDAAVKMTDMIKRSGNEDLIAPYDLVRLRQV
LRYRALYEITTGCFLPEIAMYLYNPQKFIGGFYARHDNFRTRIDDCEHFLSGLINYYNYTYRQA

Sequences:

>Translated_544_residues
MQKSTVTKLKQALIATGNLKDYGTSTVTLALSVSDHRHRAQVRFYRCDSFKQAWIAVAQQLAKTPQASWVRLEAVQSTQK
LPRETFEKRLAATFRMNYWRYGISFDADFKTALLEMESNGQAFFRPSKAHRIGKNRSGSWVDYDRVEPYLNKREGALPVD
IRKTENVWVFTTAGVFTDGQKIWNLSEQEDCGKGVRVVTDEQSELQSAIEHGETFLINQLKDNGKFVYGYFPARQRVLSN
YNVVRHFSSLYALLEAIPFTKRTENCAKVKLAIQWGLKNATIEKEGAIFVDDNGELKLGGQALLILALSKYQDVTKDDTF
MPVLMKAFKGVHFFQEPSGKLIHVLNPDLTVKAAYRIIYYEGEVAFALSRLYELTHDKNVMDLVKQILDYMVANDYGKYH
DHWISYAINEALLVFPDNRDYMKLGLKNVFSHLKFIEERDTTYPTLLELVDAAVKMTDMIKRSGNEDLIAPYDLVRLRQV
LRYRALYEITTGCFLPEIAMYLYNPQKFIGGFYARHDNFRTRIDDCEHFLSGLINYYNYTYRQA
>Mature_544_residues
MQKSTVTKLKQALIATGNLKDYGTSTVTLALSVSDHRHRAQVRFYRCDSFKQAWIAVAQQLAKTPQASWVRLEAVQSTQK
LPRETFEKRLAATFRMNYWRYGISFDADFKTALLEMESNGQAFFRPSKAHRIGKNRSGSWVDYDRVEPYLNKREGALPVD
IRKTENVWVFTTAGVFTDGQKIWNLSEQEDCGKGVRVVTDEQSELQSAIEHGETFLINQLKDNGKFVYGYFPARQRVLSN
YNVVRHFSSLYALLEAIPFTKRTENCAKVKLAIQWGLKNATIEKEGAIFVDDNGELKLGGQALLILALSKYQDVTKDDTF
MPVLMKAFKGVHFFQEPSGKLIHVLNPDLTVKAAYRIIYYEGEVAFALSRLYELTHDKNVMDLVKQILDYMVANDYGKYH
DHWISYAINEALLVFPDNRDYMKLGLKNVFSHLKFIEERDTTYPTLLELVDAAVKMTDMIKRSGNEDLIAPYDLVRLRQV
LRYRALYEITTGCFLPEIAMYLYNPQKFIGGFYARHDNFRTRIDDCEHFLSGLINYYNYTYRQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62857; Mature: 62857

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKSTVTKLKQALIATGNLKDYGTSTVTLALSVSDHRHRAQVRFYRCDSFKQAWIAVAQQ
CCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHH
LAKTPQASWVRLEAVQSTQKLPRETFEKRLAATFRMNYWRYGISFDADFKTALLEMESNG
HHCCCCCCCEEHHHHHHHHHCCHHHHHHHHHHHHHHHHEEEEEEECCCHHEEEEEECCCC
QAFFRPSKAHRIGKNRSGSWVDYDRVEPYLNKREGALPVDIRKTENVWVFTTAGVFTDGQ
CEEECCCHHHHCCCCCCCCCCCHHHCCHHHCCCCCCCCEEEEECCCEEEEEECCEEECCH
KIWNLSEQEDCGKGVRVVTDEQSELQSAIEHGETFLINQLKDNGKFVYGYFPARQRVLSN
HHCCCCCHHHCCCCCEEEECCHHHHHHHHHCCCEEEEEEECCCCCEEEEECHHHHHHHHH
YNVVRHFSSLYALLEAIPFTKRTENCAKVKLAIQWGLKNATIEKEGAIFVDDNGELKLGG
HHHHHHHHHHHHHHHHCCCCCCCCCHHEEEEEEEECCCCCCEECCCEEEECCCCCEEECC
QALLILALSKYQDVTKDDTFMPVLMKAFKGVHFFQEPSGKLIHVLNPDLTVKAAYRIIYY
CEEEEEEHHHHCCCCCCCCHHHHHHHHHCCCEEEECCCCCEEEEECCCEEEEEEEEEEEE
EGEVAFALSRLYELTHDKNVMDLVKQILDYMVANDYGKYHDHWISYAINEALLVFPDNRD
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEEECCCH
YMKLGLKNVFSHLKFIEERDTTYPTLLELVDAAVKMTDMIKRSGNEDLIAPYDLVRLRQV
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
LRYRALYEITTGCFLPEIAMYLYNPQKFIGGFYARHDNFRTRIDDCEHFLSGLINYYNYT
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
YRQA
HCCC
>Mature Secondary Structure
MQKSTVTKLKQALIATGNLKDYGTSTVTLALSVSDHRHRAQVRFYRCDSFKQAWIAVAQQ
CCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHH
LAKTPQASWVRLEAVQSTQKLPRETFEKRLAATFRMNYWRYGISFDADFKTALLEMESNG
HHCCCCCCCEEHHHHHHHHHCCHHHHHHHHHHHHHHHHEEEEEEECCCHHEEEEEECCCC
QAFFRPSKAHRIGKNRSGSWVDYDRVEPYLNKREGALPVDIRKTENVWVFTTAGVFTDGQ
CEEECCCHHHHCCCCCCCCCCCHHHCCHHHCCCCCCCCEEEEECCCEEEEEECCEEECCH
KIWNLSEQEDCGKGVRVVTDEQSELQSAIEHGETFLINQLKDNGKFVYGYFPARQRVLSN
HHCCCCCHHHCCCCCEEEECCHHHHHHHHHCCCEEEEEEECCCCCEEEEECHHHHHHHHH
YNVVRHFSSLYALLEAIPFTKRTENCAKVKLAIQWGLKNATIEKEGAIFVDDNGELKLGG
HHHHHHHHHHHHHHHHCCCCCCCCCHHEEEEEEEECCCCCCEECCCEEEECCCCCEEECC
QALLILALSKYQDVTKDDTFMPVLMKAFKGVHFFQEPSGKLIHVLNPDLTVKAAYRIIYY
CEEEEEEHHHHCCCCCCCCHHHHHHHHHCCCEEEECCCCCEEEEECCCEEEEEEEEEEEE
EGEVAFALSRLYELTHDKNVMDLVKQILDYMVANDYGKYHDHWISYAINEALLVFPDNRD
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEEECCCH
YMKLGLKNVFSHLKFIEERDTTYPTLLELVDAAVKMTDMIKRSGNEDLIAPYDLVRLRQV
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
LRYRALYEITTGCFLPEIAMYLYNPQKFIGGFYARHDNFRTRIDDCEHFLSGLINYYNYT
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
YRQA
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA