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The map label for this gene is 28378000

Identifier: 28378000

GI number: 28378000

Start: 1120036

End: 1120476

Strand: Direct

Name: 28378000

Synonym: lp_1230

Alternate gene names: NA

Gene position: 1120036-1120476 (Clockwise)

Preceding gene: 28377999

Following gene: 28378003

Centisome position: 33.86

GC content: 36.96

Gene sequence:

>441_bases
ATGCTAAATCATCAACAAATCAAAGCCCAGTTTGAAAGTTTAGAAACACTACAATCTATTCAGAAGCAAGTGCACCAAAT
GTCAATACAAGGACTTGTAACAACCGGGATTTCCATGCGTGAGTGGGAAGTATTAGTCTATCTTGAGCAACATGAACAAG
CTAGTGCTAGTGAGTTAGCAAAAGTATTCAAGGTCACTCGCACACTAATTTCTAGGAATACTTGGCATCTCATTCAAGAT
AATTTGATTCAGCCACAAATTGATCAAAGCGATCGACGAATAGTTTGGTTGTCATTGACTACTACTGGTCAAGAAACTAT
TGGGAAAGTTGCTCGGCAAATACAGGCAAATCTACAAGCTTTTGATTGTAATCACGAACTGGCTACATTAATGAAACAGC
TCAGATACTTAAAGCAACAGTTAATTATACTAAACAACTAA

Upstream 100 bases:

>100_bases
AACATATGACGCTTAGTGGTTTATTGTTATTAGCCATGAGTGGCCTATTAGGTCTCCTTGGTATGGCTAAGCGACAGCAC
AAAGAGTAGGGCAGAAGTAT

Downstream 100 bases:

>100_bases
AAAGCAACCCTAAAGTGCCCCATAAATTGGATTTACTCCAATTTATGGGGCACTTTAATCTCAAAGACCCAATAACTTAT
TTAACTTTGTTGGGCCTTTG

Product: transcription regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MLNHQQIKAQFESLETLQSIQKQVHQMSIQGLVTTGISMREWEVLVYLEQHEQASASELAKVFKVTRTLISRNTWHLIQD
NLIQPQIDQSDRRIVWLSLTTTGQETIGKVARQIQANLQAFDCNHELATLMKQLRYLKQQLIILNN

Sequences:

>Translated_146_residues
MLNHQQIKAQFESLETLQSIQKQVHQMSIQGLVTTGISMREWEVLVYLEQHEQASASELAKVFKVTRTLISRNTWHLIQD
NLIQPQIDQSDRRIVWLSLTTTGQETIGKVARQIQANLQAFDCNHELATLMKQLRYLKQQLIILNN
>Mature_146_residues
MLNHQQIKAQFESLETLQSIQKQVHQMSIQGLVTTGISMREWEVLVYLEQHEQASASELAKVFKVTRTLISRNTWHLIQD
NLIQPQIDQSDRRIVWLSLTTTGQETIGKVARQIQANLQAFDCNHELATLMKQLRYLKQQLIILNN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16965; Mature: 16965

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNHQQIKAQFESLETLQSIQKQVHQMSIQGLVTTGISMREWEVLVYLEQHEQASASELA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEEEECCCCCCHHHHH
KVFKVTRTLISRNTWHLIQDNLIQPQIDQSDRRIVWLSLTTTGQETIGKVARQIQANLQA
HHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHH
FDCNHELATLMKQLRYLKQQLIILNN
CCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLNHQQIKAQFESLETLQSIQKQVHQMSIQGLVTTGISMREWEVLVYLEQHEQASASELA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEEEECCCCCCHHHHH
KVFKVTRTLISRNTWHLIQDNLIQPQIDQSDRRIVWLSLTTTGQETIGKVARQIQANLQA
HHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHH
FDCNHELATLMKQLRYLKQQLIILNN
CCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA