Definition Lactobacillus plantarum WCFS1, complete genome.
Accession NC_004567
Length 3,308,274

Click here to switch to the map view.

The map label for this gene is 28377942

Identifier: 28377942

GI number: 28377942

Start: 1063773

End: 1064639

Strand: Direct

Name: 28377942

Synonym: lp_1165

Alternate gene names: NA

Gene position: 1063773-1064639 (Clockwise)

Preceding gene: 28377941

Following gene: 28377943

Centisome position: 32.15

GC content: 46.25

Gene sequence:

>867_bases
ATGCTTAAACGATATTGGTGGCGGTGGCTTCTTGGAATCGGTTTGTTAGTCGGGATCTGTTGGCCGGCCTACACGTGGAG
TCAAGCGAATATCAAGACGCTGAAAAACACTGGTCGGACGCGGATGGCACCAGTTATTATGGTCCCCGGATCGAGTGCGT
CACAGAACCGGTTTGATAGTTTGATTACCGAGTTGGGGAAGGAAACGCCGAAAAAACACAGTGTATTGAAGCTGACAGTT
CAGACGGATGGGACAATTAAGTATAGTGGTTCGATTGCTGCTAATGATAATGAGCCGTTCATCGTGATTGGCTTCGCGAA
TAATCGTGATGGTAAAGCTAATATTGATAAGCAAGCTGTCTGGTTGAATACGGCATTTAAGGCGTTGGTCAAAACGTATC
ACTTTAATCACTTTTATGCGCTAGGTCATTCCAATGGTGGCCTCATTTGGACCCTCTTTTTAGAGCGCTATCTAAAGGAA
AGTCCGAAGGTTCATATTGACCGGTTAATGACGATTGCCTCGCCGTACAATATGGAATCGACAAGTACGACCGCCAAGAC
GAGCATGTTCAAGGAACTTTACCGTTATCGGACTGGTTTGCCGGAATCGTTAACCGTTTACTCGATTGCGGGGACGGAAA
ACTATACCAGTGATGGGACGGTGCCGTATAACAGCGTTAACTACGGTAAGTACATCTTTCAAGATCAGGTCAAGCATTTT
ACGGAGATTACTGTAACGGGGGCGAATACGGCGCACTCCGATCTACCACAGAATAAGCAAATCGTCAGCCTGATTCGACA
GTACTTACTGGCTGAAACGATGCCTGACAAGGTTCGTCAAAAAAACGCACAACGGGTACAAAATTAG

Upstream 100 bases:

>100_bases
CGGGCCTTCATCGTTAGTCTGATCAATATAGCGGTAGCCACAGCAGTCTACTTGCCATTTGTCCTATTGGCAAACCAGGT
TGAGGAGGAGGCGCAGGCGG

Downstream 100 bases:

>100_bases
TTACGTTGTGTGGCAGTGATACTGCTGTTAAGACAACACTGGTGAGCGATCTGGTTAAGAAAGTTATACATGCAGTGAAT
AGAACGACAAAAACGATTAG

Product: cell surface hydrolase (putative)

Products: NA

Alternate protein names: Cell Surface Hydrolase; Lipoprotein; Lipase/Esterase; Hydrolase; Extracellular Lipase/Esterase; Alpha/Beta Hydrolase; Cell Surface Hydrolase Membrane-Bound; Acyltransferase; Secreted Protein; Ypothetical Protein SMU.

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MLKRYWWRWLLGIGLLVGICWPAYTWSQANIKTLKNTGRTRMAPVIMVPGSSASQNRFDSLITELGKETPKKHSVLKLTV
QTDGTIKYSGSIAANDNEPFIVIGFANNRDGKANIDKQAVWLNTAFKALVKTYHFNHFYALGHSNGGLIWTLFLERYLKE
SPKVHIDRLMTIASPYNMESTSTTAKTSMFKELYRYRTGLPESLTVYSIAGTENYTSDGTVPYNSVNYGKYIFQDQVKHF
TEITVTGANTAHSDLPQNKQIVSLIRQYLLAETMPDKVRQKNAQRVQN

Sequences:

>Translated_288_residues
MLKRYWWRWLLGIGLLVGICWPAYTWSQANIKTLKNTGRTRMAPVIMVPGSSASQNRFDSLITELGKETPKKHSVLKLTV
QTDGTIKYSGSIAANDNEPFIVIGFANNRDGKANIDKQAVWLNTAFKALVKTYHFNHFYALGHSNGGLIWTLFLERYLKE
SPKVHIDRLMTIASPYNMESTSTTAKTSMFKELYRYRTGLPESLTVYSIAGTENYTSDGTVPYNSVNYGKYIFQDQVKHF
TEITVTGANTAHSDLPQNKQIVSLIRQYLLAETMPDKVRQKNAQRVQN
>Mature_288_residues
MLKRYWWRWLLGIGLLVGICWPAYTWSQANIKTLKNTGRTRMAPVIMVPGSSASQNRFDSLITELGKETPKKHSVLKLTV
QTDGTIKYSGSIAANDNEPFIVIGFANNRDGKANIDKQAVWLNTAFKALVKTYHFNHFYALGHSNGGLIWTLFLERYLKE
SPKVHIDRLMTIASPYNMESTSTTAKTSMFKELYRYRTGLPESLTVYSIAGTENYTSDGTVPYNSVNYGKYIFQDQVKHF
TEITVTGANTAHSDLPQNKQIVSLIRQYLLAETMPDKVRQKNAQRVQN

Specific function: Unknown

COG id: COG4814

COG function: function code R; Uncharacterized protein with an alpha/beta hydrolase fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32690; Mature: 32690

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKRYWWRWLLGIGLLVGICWPAYTWSQANIKTLKNTGRTRMAPVIMVPGSSASQNRFDS
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCEEEEECCCCCCHHHHHH
LITELGKETPKKHSVLKLTVQTDGTIKYSGSIAANDNEPFIVIGFANNRDGKANIDKQAV
HHHHHHHCCCCCCCEEEEEEECCCEEEECCEEEECCCCCEEEEEECCCCCCCCCCCCHHH
WLNTAFKALVKTYHFNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMES
HHHHHHHHHHHHHHCCEEEEEECCCCCEEHHHHHHHHHHCCCCEEHHHHHHHCCCCCCCC
TSTTAKTSMFKELYRYRTGLPESLTVYSIAGTENYTSDGTVPYNSVNYGKYIFQDQVKHF
CCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
TEITVTGANTAHSDLPQNKQIVSLIRQYLLAETMPDKVRQKNAQRVQN
HEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MLKRYWWRWLLGIGLLVGICWPAYTWSQANIKTLKNTGRTRMAPVIMVPGSSASQNRFDS
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCEEEEECCCCCCHHHHHH
LITELGKETPKKHSVLKLTVQTDGTIKYSGSIAANDNEPFIVIGFANNRDGKANIDKQAV
HHHHHHHCCCCCCCEEEEEEECCCEEEECCEEEECCCCCEEEEEECCCCCCCCCCCCHHH
WLNTAFKALVKTYHFNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMES
HHHHHHHHHHHHHHCCEEEEEECCCCCEEHHHHHHHHHHCCCCEEHHHHHHHCCCCCCCC
TSTTAKTSMFKELYRYRTGLPESLTVYSIAGTENYTSDGTVPYNSVNYGKYIFQDQVKHF
CCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
TEITVTGANTAHSDLPQNKQIVSLIRQYLLAETMPDKVRQKNAQRVQN
HEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA