| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is 28377933
Identifier: 28377933
GI number: 28377933
Start: 1055322
End: 1056206
Strand: Direct
Name: 28377933
Synonym: lp_1156
Alternate gene names: NA
Gene position: 1055322-1056206 (Clockwise)
Preceding gene: 28377932
Following gene: 28377934
Centisome position: 31.9
GC content: 43.95
Gene sequence:
>885_bases ATGTATAATCGACCTAATTGGCAACGACGGCGGCGAAGTCTGTTAGTGCTTGTATTAGGCTTACTGTTTCTGGGCTTTTT GATTCAGCCCTCATACCAGTGGACGAAAACCAACGTGGCTGCGATGGCAGGACGCCATGATTCGCAGATGTCACCAATTA TTATGATTCCCGGCAGTAGTGCGACCCAGAATCGGTTTGACACCTTAGTCAAGCAACTTAATAAGGCTGATCATCGTCGG CATAGTTTAATTAAGCTGACCGTGATGACGGATGATACGATTAAAATGACGGGGTCGTTGCGTGCCCGTGATAACGAGCC AATCATCGTCGTTGGCTTTCAAAATAATCGTGACGGCTATGATAATATTAAGCATCAGGCCCGTTGGTTCTCATTGGCCT TTAAGAAGTTGGCTGCCAAGTATCAATTTAATAATTTCAAAGCAATTGGTCACTCGAATGGTGGTCTGATTTATACGTAC TACTTTGAACACTATTTTAATCGCGACGATATTAAGGTCAAACGAATTATGACCATTGGCTCACCTTACAATTTCTCAGA AGCTAATTTGAATCATAAGACACAAATGTTAGCTGACTTTATTAAGTACCGCGATCGATTGCCTAAGTCAGCGACAATGT ATTCGGTCGCAGGTACCGAAAACTATGATTCGGACGGTCTTGTTCCAGCGCGGAGTGTCGAGGCTGGCAAGTATATCTAT CAAGGGCAAGTCAAGCATTTTACAGAGATTACGGTTACTGGTACGAATGCCCAGCACTCCGATTTACCCCAAAATGCGCA AATTGTCACGTTGATTAGAACTTACATGTTGGATAAGCCGAAACAGACTCGTAAGGGCTTAGTATCGACGGGGACTGTCG AATGA
Upstream 100 bases:
>100_bases ATCGTTGATTTGGCACTATCAGTGGTGATCTATTTGCCGTTCATGCGGTTGGCGGAAACCATTGTGCAGGCGGCACAAGC ACAGGTGGGGGGTGCTAAGC
Downstream 100 bases:
>100_bases GCGGCAACGAGGTTCAGTCGTTGTGGACTGGACAGTGTTCAAGAGTTTGTGACGGTGGCACCTGTGAGGAAGTTTAGGGT GTTATTAAGAATTGTGGTAA
Product: cell surface hydrolase (putative)
Products: NA
Alternate protein names: Cell Surface Hydrolase; Lipoprotein; Cell Surface Hydrolase Membrane-Bound; Hydrolase; Lipase/Esterase; Alpha/Beta Hydrolase; Acyltransferase; Extracellular Lipase/Esterase; Secreted Protein; Ypothetical Protein SMU.
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MYNRPNWQRRRRSLLVLVLGLLFLGFLIQPSYQWTKTNVAAMAGRHDSQMSPIIMIPGSSATQNRFDTLVKQLNKADHRR HSLIKLTVMTDDTIKMTGSLRARDNEPIIVVGFQNNRDGYDNIKHQARWFSLAFKKLAAKYQFNNFKAIGHSNGGLIYTY YFEHYFNRDDIKVKRIMTIGSPYNFSEANLNHKTQMLADFIKYRDRLPKSATMYSVAGTENYDSDGLVPARSVEAGKYIY QGQVKHFTEITVTGTNAQHSDLPQNAQIVTLIRTYMLDKPKQTRKGLVSTGTVE
Sequences:
>Translated_294_residues MYNRPNWQRRRRSLLVLVLGLLFLGFLIQPSYQWTKTNVAAMAGRHDSQMSPIIMIPGSSATQNRFDTLVKQLNKADHRR HSLIKLTVMTDDTIKMTGSLRARDNEPIIVVGFQNNRDGYDNIKHQARWFSLAFKKLAAKYQFNNFKAIGHSNGGLIYTY YFEHYFNRDDIKVKRIMTIGSPYNFSEANLNHKTQMLADFIKYRDRLPKSATMYSVAGTENYDSDGLVPARSVEAGKYIY QGQVKHFTEITVTGTNAQHSDLPQNAQIVTLIRTYMLDKPKQTRKGLVSTGTVE >Mature_294_residues MYNRPNWQRRRRSLLVLVLGLLFLGFLIQPSYQWTKTNVAAMAGRHDSQMSPIIMIPGSSATQNRFDTLVKQLNKADHRR HSLIKLTVMTDDTIKMTGSLRARDNEPIIVVGFQNNRDGYDNIKHQARWFSLAFKKLAAKYQFNNFKAIGHSNGGLIYTY YFEHYFNRDDIKVKRIMTIGSPYNFSEANLNHKTQMLADFIKYRDRLPKSATMYSVAGTENYDSDGLVPARSVEAGKYIY QGQVKHFTEITVTGTNAQHSDLPQNAQIVTLIRTYMLDKPKQTRKGLVSTGTVE
Specific function: Unknown
COG id: COG4814
COG function: function code R; Uncharacterized protein with an alpha/beta hydrolase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33727; Mature: 33727
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYNRPNWQRRRRSLLVLVLGLLFLGFLIQPSYQWTKTNVAAMAGRHDSQMSPIIMIPGSS CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCEEEECCCC ATQNRFDTLVKQLNKADHRRHSLIKLTVMTDDTIKMTGSLRARDNEPIIVVGFQNNRDGY CCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCEEEEEECEEECCCCCEEEEEECCCCCCH DNIKHQARWFSLAFKKLAAKYQFNNFKAIGHSNGGLIYTYYFEHYFNRDDIKVKRIMTIG HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHCCCCCEEEEEEEEEC SPYNFSEANLNHKTQMLADFIKYRDRLPKSATMYSVAGTENYDSDGLVPARSVEAGKYIY CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEE QGQVKHFTEITVTGTNAQHSDLPQNAQIVTLIRTYMLDKPKQTRKGLVSTGTVE ECCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCCCCCCCCC >Mature Secondary Structure MYNRPNWQRRRRSLLVLVLGLLFLGFLIQPSYQWTKTNVAAMAGRHDSQMSPIIMIPGSS CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCEEEECCCC ATQNRFDTLVKQLNKADHRRHSLIKLTVMTDDTIKMTGSLRARDNEPIIVVGFQNNRDGY CCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCEEEEEECEEECCCCCEEEEEECCCCCCH DNIKHQARWFSLAFKKLAAKYQFNNFKAIGHSNGGLIYTYYFEHYFNRDDIKVKRIMTIG HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHCCCCCEEEEEEEEEC SPYNFSEANLNHKTQMLADFIKYRDRLPKSATMYSVAGTENYDSDGLVPARSVEAGKYIY CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEE QGQVKHFTEITVTGTNAQHSDLPQNAQIVTLIRTYMLDKPKQTRKGLVSTGTVE ECCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA