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The map label for this gene is 28377930

Identifier: 28377930

GI number: 28377930

Start: 1050588

End: 1051166

Strand: Direct

Name: 28377930

Synonym: lp_1153

Alternate gene names: NA

Gene position: 1050588-1051166 (Clockwise)

Preceding gene: 28377929

Following gene: 28377931

Centisome position: 31.76

GC content: 42.31

Gene sequence:

>579_bases
ATGATGGTAAAGAGAAGAACACTGACACAGGCAAAAGTATTAGCAACAGCTAATCAGTTAATTGAAAGCAAGGGAATTAA
CGGATTAACAATTCGGGATTTAGCGTTAGTTTTGGATGTGCGGCCGCAATCGATTTATAATTATGTTGATAGCTTGAGTG
ATTTATTAGATCAGGTTGGCCTCCAATTTGTTCAAAATGTTGCGGATCGTTTAACTGAAACAATCTCAGACGTTGACGGT
GATGAGGCTTTGATGGCATTTGCTCAAGAATTCCGGGCGGCCTGCAACCAGCATCGGGGGTTGGCACCGTTATTACTTGA
CTTAAATGATAACCTAAGAATCCCACGGTCTCGTAAAGCAATTGTGCAGTTATACCAGGATATGTTTAAACCATTACAAC
TGGATGATTCGGCGCGGGTGGAGAATACCTTGTACCGTTCCACGTTGTTCGGATTCATTATCCAAGAGATTGGCGGCTTC
TTTAAGATGCAGGGGACTGAACTTGATGAACGGTTCACGAAGGTTATGCAGTTAGCGATTGACCAGACACACTTACCTGC
TGATAAGACGAAAAAATAA

Upstream 100 bases:

>100_bases
CATCAATTGTATTACTTTTGATAAAAGTATGTATTTCATCTCGGTTTTTGACCAGTTTGGGTTATAATGATAAACGAAAT
AAACCGATAAATGGGGGAGC

Downstream 100 bases:

>100_bases
TTTAAGATTCAGTGCGGCTATCTTAGCAGATAGCCGTTTTTTTATAGGTTAAATTCGCCAATATTTAGCAGTAAATGGGG
CGTAATACAATAATCTTTGT

Product: transcription regulator (putative)

Products: NA

Alternate protein names: Transcription Regulator

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MMVKRRTLTQAKVLATANQLIESKGINGLTIRDLALVLDVRPQSIYNYVDSLSDLLDQVGLQFVQNVADRLTETISDVDG
DEALMAFAQEFRAACNQHRGLAPLLLDLNDNLRIPRSRKAIVQLYQDMFKPLQLDDSARVENTLYRSTLFGFIIQEIGGF
FKMQGTELDERFTKVMQLAIDQTHLPADKTKK

Sequences:

>Translated_192_residues
MMVKRRTLTQAKVLATANQLIESKGINGLTIRDLALVLDVRPQSIYNYVDSLSDLLDQVGLQFVQNVADRLTETISDVDG
DEALMAFAQEFRAACNQHRGLAPLLLDLNDNLRIPRSRKAIVQLYQDMFKPLQLDDSARVENTLYRSTLFGFIIQEIGGF
FKMQGTELDERFTKVMQLAIDQTHLPADKTKK
>Mature_192_residues
MMVKRRTLTQAKVLATANQLIESKGINGLTIRDLALVLDVRPQSIYNYVDSLSDLLDQVGLQFVQNVADRLTETISDVDG
DEALMAFAQEFRAACNQHRGLAPLLLDLNDNLRIPRSRKAIVQLYQDMFKPLQLDDSARVENTLYRSTLFGFIIQEIGGF
FKMQGTELDERFTKVMQLAIDQTHLPADKTKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21761; Mature: 21761

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMVKRRTLTQAKVLATANQLIESKGINGLTIRDLALVLDVRPQSIYNYVDSLSDLLDQVG
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
LQFVQNVADRLTETISDVDGDEALMAFAQEFRAACNQHRGLAPLLLDLNDNLRIPRSRKA
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHH
IVQLYQDMFKPLQLDDSARVENTLYRSTLFGFIIQEIGGFFKMQGTELDERFTKVMQLAI
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
DQTHLPADKTKK
HHHCCCCCCCCC
>Mature Secondary Structure
MMVKRRTLTQAKVLATANQLIESKGINGLTIRDLALVLDVRPQSIYNYVDSLSDLLDQVG
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
LQFVQNVADRLTETISDVDGDEALMAFAQEFRAACNQHRGLAPLLLDLNDNLRIPRSRKA
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHH
IVQLYQDMFKPLQLDDSARVENTLYRSTLFGFIIQEIGGFFKMQGTELDERFTKVMQLAI
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
DQTHLPADKTKK
HHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA