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The map label for this gene is gatC

Identifier: 28377925

GI number: 28377925

Start: 1044093

End: 1044413

Strand: Direct

Name: gatC

Synonym: lp_1147

Alternate gene names: 28377925

Gene position: 1044093-1044413 (Clockwise)

Preceding gene: 28377924

Following gene: 28377926

Centisome position: 31.56

GC content: 46.11

Gene sequence:

>321_bases
ATGGCTGAAGAACGAATTAATGCCGAACAAGTGCAACACGTGGCGAGCTTAGCCAAATTGGAGTTTACACCAGACCAATT
AGCGATGTTCACACCGCAACTAGAAAAAATTATCGGCATGTTCGAAGAATTAAGCACAGTTGATACCACGGGTGTACCCG
TTACGTCACGGATGAGTGATCATACGAATACGCTACGTGAAGACGTGGCAGTTAAGAGTGATGAAGCACTCCGGGAAGCA
TTGCTGAAGAATGCCCCAGAAACGGCCAATGGCTTGATCAAAGTGCCAGCAATTATTGATGAAAGTGGGGACGGTGAATA
A

Upstream 100 bases:

>100_bases
AGAACGGCGAAGGGTAGTTCGTATTACACCCATGTCTTTAGTGACCAGGGCGACGATTAAACAATAATATTGAGTAAGAT
TTGAGAAAGAAGGAAATCTG

Downstream 100 bases:

>100_bases
TGACTTATTTCGACCAAGATCTAACTAGTCTGCACGCTGACTTGGTAGCCAAGAAGATCAGTGCCACGGAACTAGCGAAG
GCCACTTTTGCGAATATGAA

Product: aspartyl/glutamyl-tRNA amidotransferase subunit C

Products: NA

Alternate protein names: Asp/Glu-ADT subunit C

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MAEERINAEQVQHVASLAKLEFTPDQLAMFTPQLEKIIGMFEELSTVDTTGVPVTSRMSDHTNTLREDVAVKSDEALREA
LLKNAPETANGLIKVPAIIDESGDGE

Sequences:

>Translated_106_residues
MAEERINAEQVQHVASLAKLEFTPDQLAMFTPQLEKIIGMFEELSTVDTTGVPVTSRMSDHTNTLREDVAVKSDEALREA
LLKNAPETANGLIKVPAIIDESGDGE
>Mature_105_residues
AEERINAEQVQHVASLAKLEFTPDQLAMFTPQLEKIIGMFEELSTVDTTGVPVTSRMSDHTNTLREDVAVKSDEALREAL
LKNAPETANGLIKVPAIIDESGDGE

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GATC_LACPL (Q88XP8)

Other databases:

- EMBL:   AL935255
- RefSeq:   NP_784817.1
- ProteinModelPortal:   Q88XP8
- SMR:   Q88XP8
- GeneID:   1063229
- GenomeReviews:   AL935263_GR
- KEGG:   lpl:lp_1147
- NMPDR:   fig|220668.1.peg.951
- HOGENOM:   HBG586403
- OMA:   KDVAYIA
- ProtClustDB:   PRK00034
- BioCyc:   LPLA220668:LP_1147-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00122
- InterPro:   IPR003837
- TIGRFAMs:   TIGR00135

Pfam domain/function: PF02686 Glu-tRNAGln

EC number: 6.3.5.-

Molecular weight: Translated: 11566; Mature: 11435

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEERINAEQVQHVASLAKLEFTPDQLAMFTPQLEKIIGMFEELSTVDTTGVPVTSRMSD
CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
HTNTLREDVAVKSDEALREALLKNAPETANGLIKVPAIIDESGDGE
HHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEECCEEECCCCCCC
>Mature Secondary Structure 
AEERINAEQVQHVASLAKLEFTPDQLAMFTPQLEKIIGMFEELSTVDTTGVPVTSRMSD
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
HTNTLREDVAVKSDEALREALLKNAPETANGLIKVPAIIDESGDGE
HHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEECCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12566566