Definition Lactobacillus plantarum WCFS1, complete genome.
Accession NC_004567
Length 3,308,274

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The map label for this gene is 28377787

Identifier: 28377787

GI number: 28377787

Start: 898709

End: 899710

Strand: Direct

Name: 28377787

Synonym: lp_0967

Alternate gene names: NA

Gene position: 898709-899710 (Clockwise)

Preceding gene: 28377786

Following gene: 28377788

Centisome position: 27.17

GC content: 48.7

Gene sequence:

>1002_bases
ATGCAAGTTTTTGGACAATTTATTGCAACAGTCGGTTGGCTAGGATTGGCACTAGTCGCCAGCGAACTAGGTGCGACGTT
AATCCATTGGCTCGGTCAGTGGGTCGGATTTCGATTAATTGGTGCTCGAATTGTCCGGATTACCGGTTTTCGACTTCAAT
TAAGTCGGGTTCGTGGTCATTGGAAATTAGAACGACCGCTGACGCGTCATCCACATATCGTGGCAGCACCCTCGGCGGAT
GCCAAACGGTTCAATCACGCCATTTATTGTTTTGGCGGTGGCCTGTTCAACTTACTGACGGTCATGCTCAGTTTAATAAC
TCTGAATCAATTTAAGTTTAGTTTCGATTTATGGTTGTTTGCGTTCATTATTTGGATCTGGGTCAATACGTTGAAAGCCG
CCCAATTATTACCAATGAACTTGCACGGTTATCCCACGGCGGGACAGGAATTTCGGCAGGCACGCGAATCAACGGCGGCG
ATGACCGCCGCGTATGTCACTGCGTGTGCTGCGGCCGTTAAGGTTCAGACCGGTAGTGTCCGTGACCTTGATGCAAGTAT
GATTGTTATGCCGCGCGATGGTGGCAATCGGAATTATTTAGTCGTCCGGCAAGCCTGGTTGATTCTGGAATGGGGACTTC
AACATGGGCTGGACACCCCCGAACTGTTAGCGGGGTTGAGTCGCTTGGAGCCAAGTTTCAATACGTTGCCGCCAGCTGAT
TTGGCGAAGTATTTAGATGCAACATTGTACTGGAACTTGGTCACCAATCATCGTGACCCCCAGATCATAGCCTGGTATCA
AGATGATGGTGTTCAACAGTTATTACGTCGCTACCAACCTTTGGCTCATTATAAGTTAACTGCCGTTTATGAATGGCGGG
TCCATCAGCAGCCTGAACAGGCCCTAGCATTGATTGAAAAGGGACTAAAAATTGCTCAGCGCCTCCACGATGAGGAAGAA
ATTGCTTGGCTGAAAGCTTTACGCGTTCAAGTAACGGCCTAG

Upstream 100 bases:

>100_bases
GTCAAAAACTAATCATGGGTCATGCCCAAAAACGTGTTATTGATTTCAAAATTAATTTTGTTAAATAAAGGCTGTCAATC
AAGGTACGAGGAGGAATAGC

Downstream 100 bases:

>100_bases
ATTACCGTAGAAACTTAGATTCTGTTAAAGATTGCCAGAATCGAAGTTTGTATTGGGGAATGGGTGGTAAACTGGTGACC
ATTGAAGTGAAAAAAGGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MQVFGQFIATVGWLGLALVASELGATLIHWLGQWVGFRLIGARIVRITGFRLQLSRVRGHWKLERPLTRHPHIVAAPSAD
AKRFNHAIYCFGGGLFNLLTVMLSLITLNQFKFSFDLWLFAFIIWIWVNTLKAAQLLPMNLHGYPTAGQEFRQARESTAA
MTAAYVTACAAAVKVQTGSVRDLDASMIVMPRDGGNRNYLVVRQAWLILEWGLQHGLDTPELLAGLSRLEPSFNTLPPAD
LAKYLDATLYWNLVTNHRDPQIIAWYQDDGVQQLLRRYQPLAHYKLTAVYEWRVHQQPEQALALIEKGLKIAQRLHDEEE
IAWLKALRVQVTA

Sequences:

>Translated_333_residues
MQVFGQFIATVGWLGLALVASELGATLIHWLGQWVGFRLIGARIVRITGFRLQLSRVRGHWKLERPLTRHPHIVAAPSAD
AKRFNHAIYCFGGGLFNLLTVMLSLITLNQFKFSFDLWLFAFIIWIWVNTLKAAQLLPMNLHGYPTAGQEFRQARESTAA
MTAAYVTACAAAVKVQTGSVRDLDASMIVMPRDGGNRNYLVVRQAWLILEWGLQHGLDTPELLAGLSRLEPSFNTLPPAD
LAKYLDATLYWNLVTNHRDPQIIAWYQDDGVQQLLRRYQPLAHYKLTAVYEWRVHQQPEQALALIEKGLKIAQRLHDEEE
IAWLKALRVQVTA
>Mature_333_residues
MQVFGQFIATVGWLGLALVASELGATLIHWLGQWVGFRLIGARIVRITGFRLQLSRVRGHWKLERPLTRHPHIVAAPSAD
AKRFNHAIYCFGGGLFNLLTVMLSLITLNQFKFSFDLWLFAFIIWIWVNTLKAAQLLPMNLHGYPTAGQEFRQARESTAA
MTAAYVTACAAAVKVQTGSVRDLDASMIVMPRDGGNRNYLVVRQAWLILEWGLQHGLDTPELLAGLSRLEPSFNTLPPAD
LAKYLDATLYWNLVTNHRDPQIIAWYQDDGVQQLLRRYQPLAHYKLTAVYEWRVHQQPEQALALIEKGLKIAQRLHDEEE
IAWLKALRVQVTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37801; Mature: 37801

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVFGQFIATVGWLGLALVASELGATLIHWLGQWVGFRLIGARIVRITGFRLQLSRVRGH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECHHEEEEHHCCC
WKLERPLTRHPHIVAAPSADAKRFNHAIYCFGGGLFNLLTVMLSLITLNQFKFSFDLWLF
EEECCCCCCCCEEEECCCCCHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AFIIWIWVNTLKAAQLLPMNLHGYPTAGQEFRQARESTAAMTAAYVTACAAAVKVQTGSV
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCC
RDLDASMIVMPRDGGNRNYLVVRQAWLILEWGLQHGLDTPELLAGLSRLEPSFNTLPPAD
EECCCEEEEEECCCCCCCEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHH
LAKYLDATLYWNLVTNHRDPQIIAWYQDDGVQQLLRRYQPLAHYKLTAVYEWRVHQQPEQ
HHHHHHHHHEEEECCCCCCCCEEEEECCCHHHHHHHHCCCHHHEEEEEEEEECCCCCHHH
ALALIEKGLKIAQRLHDEEEIAWLKALRVQVTA
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHEECC
>Mature Secondary Structure
MQVFGQFIATVGWLGLALVASELGATLIHWLGQWVGFRLIGARIVRITGFRLQLSRVRGH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECHHEEEEHHCCC
WKLERPLTRHPHIVAAPSADAKRFNHAIYCFGGGLFNLLTVMLSLITLNQFKFSFDLWLF
EEECCCCCCCCEEEECCCCCHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AFIIWIWVNTLKAAQLLPMNLHGYPTAGQEFRQARESTAAMTAAYVTACAAAVKVQTGSV
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCC
RDLDASMIVMPRDGGNRNYLVVRQAWLILEWGLQHGLDTPELLAGLSRLEPSFNTLPPAD
EECCCEEEEEECCCCCCCEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHH
LAKYLDATLYWNLVTNHRDPQIIAWYQDDGVQQLLRRYQPLAHYKLTAVYEWRVHQQPEQ
HHHHHHHHHEEEECCCCCCCCEEEEECCCHHHHHHHHCCCHHHEEEEEEEEECCCCCHHH
ALALIEKGLKIAQRLHDEEEIAWLKALRVQVTA
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA