Definition Lactobacillus plantarum WCFS1, complete genome.
Accession NC_004567
Length 3,308,274

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The map label for this gene is 28377771

Identifier: 28377771

GI number: 28377771

Start: 880765

End: 881259

Strand: Direct

Name: 28377771

Synonym: lp_0948

Alternate gene names: NA

Gene position: 880765-881259 (Clockwise)

Preceding gene: 28377770

Following gene: 28377772

Centisome position: 26.62

GC content: 47.07

Gene sequence:

>495_bases
ATGGAAACAACTTTGGTGATTATTCGGGGAAATTCTGGGAGTGGCAAGACGACGCTAGCGCAGGCGTTGCAACGACGCGT
GGGCCATCATACGTTGCTAGTGTCCCAAGATGTCGTTCGTCGCGACATGCTGATGAGTCATGATTACCCGGGAAATATTT
CAATTGGTCTGATTGAACAAATTGTGTGTTATGGGCTGGGACGTGTGCCTGTAGTCATTGTGGAAGGCATCTTAGCACGT
GATCGGTATGGAAAAATGTTGGCGCGGCTTAGTCAATCGTTTCCACGCGTCCTTACTTATTATTTTGAAGTGAGCTTTGC
CACGACCTTGGCGCGTCATCAAAAGCGTCATCGTGATTTTGGTGTGGAAGACATGCGTCGGTGGTGGCTTCCACATGATA
CGTTGGGCGTTGCTAACGAAGTCTTAATTGGCGAGCAACAAGATTTAACCACGGAAGTTCAACAAATTATGACTACCATA
CATGATTGTGACTAA

Upstream 100 bases:

>100_bases
AAAGCCAAATAGTATCAGCGAACGTTAGCTAATTTGGCTAACGTTTTTTTGTTAGCTGTGCGGTATGATTAAGATACAGG
AATGAGTGGAGGACATGTGG

Downstream 100 bases:

>100_bases
ACAACCATGAGTTGATTGGTTTGATCGTGGTTGAGGATTAAGCTGAAATCATAAAGGGGGGCGAGCCAATGTTACTCGCA
GCATTATTGAAAACGCGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
METTLVIIRGNSGSGKTTLAQALQRRVGHHTLLVSQDVVRRDMLMSHDYPGNISIGLIEQIVCYGLGRVPVVIVEGILAR
DRYGKMLARLSQSFPRVLTYYFEVSFATTLARHQKRHRDFGVEDMRRWWLPHDTLGVANEVLIGEQQDLTTEVQQIMTTI
HDCD

Sequences:

>Translated_164_residues
METTLVIIRGNSGSGKTTLAQALQRRVGHHTLLVSQDVVRRDMLMSHDYPGNISIGLIEQIVCYGLGRVPVVIVEGILAR
DRYGKMLARLSQSFPRVLTYYFEVSFATTLARHQKRHRDFGVEDMRRWWLPHDTLGVANEVLIGEQQDLTTEVQQIMTTI
HDCD
>Mature_164_residues
METTLVIIRGNSGSGKTTLAQALQRRVGHHTLLVSQDVVRRDMLMSHDYPGNISIGLIEQIVCYGLGRVPVVIVEGILAR
DRYGKMLARLSQSFPRVLTYYFEVSFATTLARHQKRHRDFGVEDMRRWWLPHDTLGVANEVLIGEQQDLTTEVQQIMTTI
HDCD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18677; Mature: 18677

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METTLVIIRGNSGSGKTTLAQALQRRVGHHTLLVSQDVVRRDMLMSHDYPGNISIGLIEQ
CCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHCCCCCCCCHHHHHHH
IVCYGLGRVPVVIVEGILARDRYGKMLARLSQSFPRVLTYYFEVSFATTLARHQKRHRDF
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GVEDMRRWWLPHDTLGVANEVLIGEQQDLTTEVQQIMTTIHDCD
CHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
METTLVIIRGNSGSGKTTLAQALQRRVGHHTLLVSQDVVRRDMLMSHDYPGNISIGLIEQ
CCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHCCCCCCCCHHHHHHH
IVCYGLGRVPVVIVEGILARDRYGKMLARLSQSFPRVLTYYFEVSFATTLARHQKRHRDF
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GVEDMRRWWLPHDTLGVANEVLIGEQQDLTTEVQQIMTTIHDCD
CHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA