| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is hpaG [C]
Identifier: 28377759
GI number: 28377759
Start: 861714
End: 862544
Strand: Direct
Name: hpaG [C]
Synonym: lp_0931
Alternate gene names: 28377759
Gene position: 861714-862544 (Clockwise)
Preceding gene: 28377758
Following gene: 28377760
Centisome position: 26.05
GC content: 49.46
Gene sequence:
>831_bases GTGTACAATAATATTAATGAGGTGATTAATATGAAAATTGGCATGCGGGCCAACCGACCGTTTATCATTACGGATGAACA GCATGGACAAACAGTTTTAAATGCGAAGACAGTTTTGGAAGCACTACATACACCTGCAGCGGACCGACAACTTGGCTCGC TTGAAACGTTTGCGCCGCAAGAATTAGCGGCACCAATCACGGCCCCACGACAGATTTTTGCGGTGGGGATGAACTACCGT GACCATTCGGCGGAGATCCACATTACGCTGCCGAAGGTTCCAAGTATTTTTACGAAGTTTAGTAGTTCACTGGCACCAGC GAACGTGACCATGGCGACGCATGGTCCTGAGACCGACTGGGAAACCGAGCTAGTCGTGATGATTGGCAAGGGTGGGCGCG ATATCGCGACGGCTGATGCAATGGCGCACGTGGCCGGAGTGATGGTTGGTGAAGACTTATCTGATCGAGCCGTTCAGTTC GAGAATGATAATCCACAGTTTTCAATAGGTAAATCGTTTGAAAATTACGCACCAGTTGGGCCGTGGTTAACGACCGTCGA TGAGTTAGCTAACTTAGACGATGAGGTGATCACGACCACCGTCAATGGTCAGACGATGCAGCAAGCGCCGTTGAGCCAAC TGATCTTCAAGGTACCGGATTTGGTACACTACTTGTCGACGGTCTGTGAGTTACAACCAGGTGATTTGATTTTTACCGGG ACGCCTAGTGGGACCGGCGTTGGTCGCAATCCCCAAGTCTTTTTGCAAGCCGGCGATCAACTGTGCGGTCAAATCACGCA TTTAGGAACACTGAATATCACGATTAAGTAA
Upstream 100 bases:
>100_bases AATATCCTGAGCTAAGTTCGTAATTGCGTTTGAACGTTCATAAAGATTGTCCGGAATGACCGTCACGCAACTATCATTAT TGTTATGATTCATGAGATGA
Downstream 100 bases:
>100_bases ATAGCCATAGTCGGTAAGTGTGGCGGGTGAAGGTTTATATTATAACGCCCAGCACAGTACCGACTTTTTTGGTACCATGG GATTAGTAATTAAATAGGGG
Product: 2-hydroxyhepta-2,4-diene-1,7-dioateisomerase / 5-carboxymethyl-2-oxo-hex-3-ene-1,7-dioatedecarboxylase (putative)
Products: NA
Alternate protein names: UGL; Ureidoglycolase; Ureidoglycolatase; Ureidoglycolate hydrolase [H]
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MYNNINEVINMKIGMRANRPFIITDEQHGQTVLNAKTVLEALHTPAADRQLGSLETFAPQELAAPITAPRQIFAVGMNYR DHSAEIHITLPKVPSIFTKFSSSLAPANVTMATHGPETDWETELVVMIGKGGRDIATADAMAHVAGVMVGEDLSDRAVQF ENDNPQFSIGKSFENYAPVGPWLTTVDELANLDDEVITTTVNGQTMQQAPLSQLIFKVPDLVHYLSTVCELQPGDLIFTG TPSGTGVGRNPQVFLQAGDQLCGQITHLGTLNITIK
Sequences:
>Translated_276_residues MYNNINEVINMKIGMRANRPFIITDEQHGQTVLNAKTVLEALHTPAADRQLGSLETFAPQELAAPITAPRQIFAVGMNYR DHSAEIHITLPKVPSIFTKFSSSLAPANVTMATHGPETDWETELVVMIGKGGRDIATADAMAHVAGVMVGEDLSDRAVQF ENDNPQFSIGKSFENYAPVGPWLTTVDELANLDDEVITTTVNGQTMQQAPLSQLIFKVPDLVHYLSTVCELQPGDLIFTG TPSGTGVGRNPQVFLQAGDQLCGQITHLGTLNITIK >Mature_276_residues MYNNINEVINMKIGMRANRPFIITDEQHGQTVLNAKTVLEALHTPAADRQLGSLETFAPQELAAPITAPRQIFAVGMNYR DHSAEIHITLPKVPSIFTKFSSSLAPANVTMATHGPETDWETELVVMIGKGGRDIATADAMAHVAGVMVGEDLSDRAVQF ENDNPQFSIGKSFENYAPVGPWLTTVDELANLDDEVITTTVNGQTMQQAPLSQLIFKVPDLVHYLSTVCELQPGDLIFTG TPSGTGVGRNPQVFLQAGDQLCGQITHLGTLNITIK
Specific function: Unknown
COG id: COG0179
COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FAH family [H]
Homologues:
Organism=Homo sapiens, GI156231349, Length=210, Percent_Identity=43.3333333333333, Blast_Score=183, Evalue=2e-46, Organism=Homo sapiens, GI40786394, Length=210, Percent_Identity=42.8571428571429, Blast_Score=179, Evalue=2e-45, Organism=Homo sapiens, GI215422413, Length=181, Percent_Identity=31.4917127071823, Blast_Score=92, Evalue=4e-19, Organism=Homo sapiens, GI66348062, Length=181, Percent_Identity=31.4917127071823, Blast_Score=92, Evalue=5e-19, Organism=Homo sapiens, GI13654274, Length=181, Percent_Identity=31.4917127071823, Blast_Score=92, Evalue=6e-19, Organism=Escherichia coli, GI1787428, Length=195, Percent_Identity=28.2051282051282, Blast_Score=81, Evalue=8e-17, Organism=Caenorhabditis elegans, GI17557057, Length=179, Percent_Identity=32.9608938547486, Blast_Score=93, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6324161, Length=216, Percent_Identity=27.7777777777778, Blast_Score=74, Evalue=2e-14, Organism=Drosophila melanogaster, GI28572127, Length=215, Percent_Identity=39.0697674418605, Blast_Score=149, Evalue=3e-36, Organism=Drosophila melanogaster, GI24663695, Length=213, Percent_Identity=34.2723004694836, Blast_Score=134, Evalue=6e-32, Organism=Drosophila melanogaster, GI28571789, Length=203, Percent_Identity=31.0344827586207, Blast_Score=93, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002529 - InterPro: IPR011234 [H]
Pfam domain/function: PF01557 FAA_hydrolase [H]
EC number: =4.3.2.3 [H]
Molecular weight: Translated: 29909; Mature: 29909
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYNNINEVINMKIGMRANRPFIITDEQHGQTVLNAKTVLEALHTPAADRQLGSLETFAPQ CCCCHHHHEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCH ELAAPITAPRQIFAVGMNYRDHSAEIHITLPKVPSIFTKFSSSLAPANVTMATHGPETDW HHCCCCCCCCEEEEECCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCEEEEEECCCCCCC ETELVVMIGKGGRDIATADAMAHVAGVMVGEDLSDRAVQFENDNPQFSIGKSFENYAPVG CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEECCCCCCCCCCC PWLTTVDELANLDDEVITTTVNGQTMQQAPLSQLIFKVPDLVHYLSTVCELQPGDLIFTG HHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEC TPSGTGVGRNPQVFLQAGDQLCGQITHLGTLNITIK CCCCCCCCCCCEEEEECCHHHHHHHHCCEEEEEEEC >Mature Secondary Structure MYNNINEVINMKIGMRANRPFIITDEQHGQTVLNAKTVLEALHTPAADRQLGSLETFAPQ CCCCHHHHEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCH ELAAPITAPRQIFAVGMNYRDHSAEIHITLPKVPSIFTKFSSSLAPANVTMATHGPETDW HHCCCCCCCCEEEEECCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCEEEEEECCCCCCC ETELVVMIGKGGRDIATADAMAHVAGVMVGEDLSDRAVQFENDNPQFSIGKSFENYAPVG CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEECCCCCCCCCCC PWLTTVDELANLDDEVITTTVNGQTMQQAPLSQLIFKVPDLVHYLSTVCELQPGDLIFTG HHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEC TPSGTGVGRNPQVFLQAGDQLCGQITHLGTLNITIK CCCCCCCCCCCEEEEECCHHHHHHHHCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA