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The map label for this gene is ydaS [H]

Identifier: 28377754

GI number: 28377754

Start: 859596

End: 859850

Strand: Direct

Name: ydaS [H]

Synonym: lp_0926

Alternate gene names: 28377754

Gene position: 859596-859850 (Clockwise)

Preceding gene: 28377753

Following gene: 28377755

Centisome position: 25.98

GC content: 45.49

Gene sequence:

>255_bases
ATGTTAGGATGGCTATGGTCATTAATTGTTGGTGGTGTCATTGGTGCGTTAGCAGGTGCGATTACCAGCCGTGACGTTCC
AATGGGGATCATTGGCAATATTATTGCCGGTTTAGTTGGTGCCTGGATTGGTCAAGCATTGCTTGGAACTTGGGGACCTT
CGTTAGCTGGTATGGCATTGGTACCCTCAATCTTAGGCGCTATTATCTTAGTATTAATCGTTTCTGCAATCTTCGGCATG
CGTAAGAAACGTTAG

Upstream 100 bases:

>100_bases
TTTAAGTGACAATTTGACCAGTGTGCATATTAATTGTCCCAAAATTAAATTATGGTTATCATAAGCATGTACTCAAATAT
AACTGTAAGGAGTGATTAGA

Downstream 100 bases:

>100_bases
GCGGTGATTAGATGAGCCGCTTAGCTAAGTTTACGGTGACGTTAGTCGGAATTGTATTGGTGTTATTAGCGGTTTTTGAA
CTGGGTCAGTTGTACCCAAT

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 84; Mature: 84

Protein sequence:

>84_residues
MLGWLWSLIVGGVIGALAGAITSRDVPMGIIGNIIAGLVGAWIGQALLGTWGPSLAGMALVPSILGAIILVLIVSAIFGM
RKKR

Sequences:

>Translated_84_residues
MLGWLWSLIVGGVIGALAGAITSRDVPMGIIGNIIAGLVGAWIGQALLGTWGPSLAGMALVPSILGAIILVLIVSAIFGM
RKKR
>Mature_84_residues
MLGWLWSLIVGGVIGALAGAITSRDVPMGIIGNIIAGLVGAWIGQALLGTWGPSLAGMALVPSILGAIILVLIVSAIFGM
RKKR

Specific function: Unknown

COG id: COG2261

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0410 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007341 [H]

Pfam domain/function: PF04226 Transgly_assoc [H]

EC number: NA

Molecular weight: Translated: 8536; Mature: 8536

Theoretical pI: Translated: 12.24; Mature: 12.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGWLWSLIVGGVIGALAGAITSRDVPMGIIGNIIAGLVGAWIGQALLGTWGPSLAGMAL
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
VPSILGAIILVLIVSAIFGMRKKR
HHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLGWLWSLIVGGVIGALAGAITSRDVPMGIIGNIIAGLVGAWIGQALLGTWGPSLAGMAL
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
VPSILGAIILVLIVSAIFGMRKKR
HHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]