| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is 28377723
Identifier: 28377723
GI number: 28377723
Start: 821093
End: 821974
Strand: Direct
Name: 28377723
Synonym: lp_0891
Alternate gene names: NA
Gene position: 821093-821974 (Clockwise)
Preceding gene: 28377720
Following gene: 28377724
Centisome position: 24.82
GC content: 48.87
Gene sequence:
>882_bases TTGATGGTAATTGCAATTGTGGTGTTGTTGATGCTGCTCAGCATCGGCTTATTTGGGTTGCTGTTAGCCGGTGCCAGACG GCAAGCAGCGCCATTTTTTGACCACAGTTTTGGTTTCGGCATGGTTATCGGGGCCGTGACGGATTTTCTTGACACACTTG GTATCGGAAGTTTCGTCGTGTCCACGGCAATTTTTCAAGCGAGCCATTATTTAAAGGATGAACGTAAGCTACCTGGAACT TTGAACACGATGCATGCGATTCCGACCGCGTTTGAGGCGTTTTTCTTTGTTACAGCAGTTGCGGTCGAGCCAGTGACACT GATTAGTTTAGTTTTAGCAGCAACGCTCGGCGCATTACTGGGTAGTGAAGTCATGACGAAGCTTAATCAGCGGTGGATTC AGTTAATCATGGCCGGTGCGTTAGTCATCACTGCTTTACTGATGGCAGCGAAGTTATTAGGTTGGATCAGTTTGCTGGGA GTTGCTAATCAGGCGACGGGGCTATCCGGTTGGAAATTATTGGTCGGCATTGGTGGCAACTTTATCCTAGGGTTACTGAT GTCAGCCGGAGTCGGACTGTACGCACCGTGTATGGTAATGGTGTATTTTCTGGGATTGACCCCGATTGCCGCCTTCCCAA TTATGATGCTGTCGTGCGCATTGTTGATGCCGATTTCGGCAGTGAATTTTATTCGCCATGACCGCGTCGATTATCGCGGC TTATTCGGCATTATTTTAGGCGGTATTATTGGCGTGGTGGTGGCAGCGACCTTAGTTAAGTCACTGTCCTTAACAGCCCT GAGTTGGTTGATCGTCTTAGTGAGCTGTTGGACGGCCTTTTCGTTATGGCGTGCCGCGCAACGCCGGAAAAATGTGTTAT AG
Upstream 100 bases:
>100_bases GATTGTGGGTACCACTTGCAGTGACGTCATGGTAATAATTTTTGGTTCCTTCCTAAAAATACAGTATAATGCTACGAGTA GGTAAGAGAGTGGGGTTAGA
Downstream 100 bases:
>100_bases TCAACGGTATGAGTGGTTAGGCTAACCAAGCCTAGCCACTTTTTTGTCGTTGTTTAAAATGATTTTCAGGCTGCTAGAAA AAATAGCGGTCGCTGGTTGA
Product: integral membrane protein
Products: NA
Alternate protein names: Membrane Family Protein; Permease; Na+/Solute Symporter
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MMVIAIVVLLMLLSIGLFGLLLAGARRQAAPFFDHSFGFGMVIGAVTDFLDTLGIGSFVVSTAIFQASHYLKDERKLPGT LNTMHAIPTAFEAFFFVTAVAVEPVTLISLVLAATLGALLGSEVMTKLNQRWIQLIMAGALVITALLMAAKLLGWISLLG VANQATGLSGWKLLVGIGGNFILGLLMSAGVGLYAPCMVMVYFLGLTPIAAFPIMMLSCALLMPISAVNFIRHDRVDYRG LFGIILGGIIGVVVAATLVKSLSLTALSWLIVLVSCWTAFSLWRAAQRRKNVL
Sequences:
>Translated_293_residues MMVIAIVVLLMLLSIGLFGLLLAGARRQAAPFFDHSFGFGMVIGAVTDFLDTLGIGSFVVSTAIFQASHYLKDERKLPGT LNTMHAIPTAFEAFFFVTAVAVEPVTLISLVLAATLGALLGSEVMTKLNQRWIQLIMAGALVITALLMAAKLLGWISLLG VANQATGLSGWKLLVGIGGNFILGLLMSAGVGLYAPCMVMVYFLGLTPIAAFPIMMLSCALLMPISAVNFIRHDRVDYRG LFGIILGGIIGVVVAATLVKSLSLTALSWLIVLVSCWTAFSLWRAAQRRKNVL >Mature_293_residues MMVIAIVVLLMLLSIGLFGLLLAGARRQAAPFFDHSFGFGMVIGAVTDFLDTLGIGSFVVSTAIFQASHYLKDERKLPGT LNTMHAIPTAFEAFFFVTAVAVEPVTLISLVLAATLGALLGSEVMTKLNQRWIQLIMAGALVITALLMAAKLLGWISLLG VANQATGLSGWKLLVGIGGNFILGLLMSAGVGLYAPCMVMVYFLGLTPIAAFPIMMLSCALLMPISAVNFIRHDRVDYRG LFGIILGGIIGVVVAATLVKSLSLTALSWLIVLVSCWTAFSLWRAAQRRKNVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31248; Mature: 31248
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMVIAIVVLLMLLSIGLFGLLLAGARRQAAPFFDHSFGFGMVIGAVTDFLDTLGIGSFVV CHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHH STAIFQASHYLKDERKLPGTLNTMHAIPTAFEAFFFVTAVAVEPVTLISLVLAATLGALL HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GSEVMTKLNQRWIQLIMAGALVITALLMAAKLLGWISLLGVANQATGLSGWKLLVGIGGN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHH FILGLLMSAGVGLYAPCMVMVYFLGLTPIAAFPIMMLSCALLMPISAVNFIRHDRVDYRG HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH LFGIILGGIIGVVVAATLVKSLSLTALSWLIVLVSCWTAFSLWRAAQRRKNVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MMVIAIVVLLMLLSIGLFGLLLAGARRQAAPFFDHSFGFGMVIGAVTDFLDTLGIGSFVV CHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHH STAIFQASHYLKDERKLPGTLNTMHAIPTAFEAFFFVTAVAVEPVTLISLVLAATLGALL HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GSEVMTKLNQRWIQLIMAGALVITALLMAAKLLGWISLLGVANQATGLSGWKLLVGIGGN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHH FILGLLMSAGVGLYAPCMVMVYFLGLTPIAAFPIMMLSCALLMPISAVNFIRHDRVDYRG HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH LFGIILGGIIGVVVAATLVKSLSLTALSWLIVLVSCWTAFSLWRAAQRRKNVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA