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The map label for this gene is bglG1 [H]

Identifier: 28377718

GI number: 28377718

Start: 815559

End: 816401

Strand: Direct

Name: bglG1 [H]

Synonym: lp_0885

Alternate gene names: 28377718

Gene position: 815559-816401 (Clockwise)

Preceding gene: 28377717

Following gene: 28377719

Centisome position: 24.65

GC content: 34.28

Gene sequence:

>843_bases
ATGCGGGTGGTGAAGAAAATTAATAACAACGTGGTCGTTTGTCTTGATCAACATGGTGAAGAATTGGTCGCCTTTGGTAA
GGGATTAGGATTTCAAAAAGTCCCGTATGAGCTTACTGATATGACTAAAGTGACGATGACATTTTATAAATTAAACTATC
AATACTATCAATTACTAAAAGAAATACCCACTGAAATCTTTGATTTGAGTGCGGCAATTGTTGAGCGAGCGCAGGCACTA
ATTCCAAGAATTTTGAATCCAAATATGATTTTTAGCTTAGCTGATCATATTAACTTTGCAATAACGCGACTAACCCATTA
TAAAAGCGCCCAGTTACCATTTTCATATGATGTGGAGCAATTATACCCACAAGAAACGGATGTTGGGTATTACGCCGTCA
GGTTAATTAATCGACGGCTAAATATTCAATTACCAGTTTCCGAGGTCACAGCAATTGCCATGCATTTTGTCAATTCTCAG
ACTAATGATTTAGCGACCAATTCAAGTGTAAATAGCGACGATGAAATGATAAAAATCATCACAAAAATTATTGAACAAGA
ATATGAGCTTAGAATCAATCAAACCGAATTCACATACAACCGGTTTGTCATGCATTTACGGTATTACATTAAACGGATGA
AGAAACATGAGCAAATTTCTGAAAATGATAATTCTAAATTATTCAATACGATGAGGCATGATGAGCCTGAAATTTACTTG
GTAGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCTATCTAATGAT
ATATGTTAAAAGAATCGTTAATAAAATAAATACTCAAGCGTAA

Upstream 100 bases:

>100_bases
ACGGGCGAAGTGCCACTTGGCAGTAAGCTTCATCAACAATTAGCAGCCGGCACACCAGTTTTAAAGCAAGCATAAACTAT
GTAAAGGAGTGCGAATTAAA

Downstream 100 bases:

>100_bases
CCGTTAATTAATGGAGGTGTATGCGACATGAAAAATAAGGATAAACAGTATGAAAAAGTGGCGAATGGTGTACTGGAAGC
AGTTGGTGGTAGTGCGAATA

Product: transcription antiterminator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MRVVKKINNNVVVCLDQHGEELVAFGKGLGFQKVPYELTDMTKVTMTFYKLNYQYYQLLKEIPTEIFDLSAAIVERAQAL
IPRILNPNMIFSLADHINFAITRLTHYKSAQLPFSYDVEQLYPQETDVGYYAVRLINRRLNIQLPVSEVTAIAMHFVNSQ
TNDLATNSSVNSDDEMIKIITKIIEQEYELRINQTEFTYNRFVMHLRYYIKRMKKHEQISENDNSKLFNTMRHDEPEIYL
VAKRIADYVDSQLDTNSNDDELFYLMIYVKRIVNKINTQA

Sequences:

>Translated_280_residues
MRVVKKINNNVVVCLDQHGEELVAFGKGLGFQKVPYELTDMTKVTMTFYKLNYQYYQLLKEIPTEIFDLSAAIVERAQAL
IPRILNPNMIFSLADHINFAITRLTHYKSAQLPFSYDVEQLYPQETDVGYYAVRLINRRLNIQLPVSEVTAIAMHFVNSQ
TNDLATNSSVNSDDEMIKIITKIIEQEYELRINQTEFTYNRFVMHLRYYIKRMKKHEQISENDNSKLFNTMRHDEPEIYL
VAKRIADYVDSQLDTNSNDDELFYLMIYVKRIVNKINTQA
>Mature_280_residues
MRVVKKINNNVVVCLDQHGEELVAFGKGLGFQKVPYELTDMTKVTMTFYKLNYQYYQLLKEIPTEIFDLSAAIVERAQAL
IPRILNPNMIFSLADHINFAITRLTHYKSAQLPFSYDVEQLYPQETDVGYYAVRLINRRLNIQLPVSEVTAIAMHFVNSQ
TNDLATNSSVNSDDEMIKIITKIIEQEYELRINQTEFTYNRFVMHLRYYIKRMKKHEQISENDNSKLFNTMRHDEPEIYL
VAKRIADYVDSQLDTNSNDDELFYLMIYVKRIVNKINTQA

Specific function: Mediates the positive regulation of the beta-glucoside (bgl) operon by functioning as a transcriptional antiterminator. This is a RNA-binding protein that recognizes a specific sequence located just upstream of two termination sites within the operon [H]

COG id: COG3711

COG function: function code K; Transcriptional antiterminator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PRD domains [H]

Homologues:

Organism=Escherichia coli, GI1790160, Length=276, Percent_Identity=30.0724637681159, Blast_Score=145, Evalue=4e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004341
- InterPro:   IPR011608
- InterPro:   IPR001550 [H]

Pfam domain/function: PF03123 CAT_RBD; PF00874 PRD [H]

EC number: NA

Molecular weight: Translated: 32908; Mature: 32908

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVVKKINNNVVVCLDQHGEELVAFGKGLGFQKVPYELTDMTKVTMTFYKLNYQYYQLLK
CCCHHHHCCCEEEEECCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EIPTEIFDLSAAIVERAQALIPRILNPNMIFSLADHINFAITRLTHYKSAQLPFSYDVEQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
LYPQETDVGYYAVRLINRRLNIQLPVSEVTAIAMHFVNSQTNDLATNSSVNSDDEMIKII
HCCCCCCCHHHHHHHHHHHCCEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
TKIIEQEYELRINQTEFTYNRFVMHLRYYIKRMKKHEQISENDNSKLFNTMRHDEPEIYL
HHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEH
VAKRIADYVDSQLDTNSNDDELFYLMIYVKRIVNKINTQA
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRVVKKINNNVVVCLDQHGEELVAFGKGLGFQKVPYELTDMTKVTMTFYKLNYQYYQLLK
CCCHHHHCCCEEEEECCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EIPTEIFDLSAAIVERAQALIPRILNPNMIFSLADHINFAITRLTHYKSAQLPFSYDVEQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
LYPQETDVGYYAVRLINRRLNIQLPVSEVTAIAMHFVNSQTNDLATNSSVNSDDEMIKII
HCCCCCCCHHHHHHHHHHHCCEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
TKIIEQEYELRINQTEFTYNRFVMHLRYYIKRMKKHEQISENDNSKLFNTMRHDEPEIYL
HHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEH
VAKRIADYVDSQLDTNSNDDELFYLMIYVKRIVNKINTQA
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3034860; 7686882; 9278503; 3301003; 3309161; 2200123; 2195546; 1698125 [H]