| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is glnH1 [H]
Identifier: 28377714
GI number: 28377714
Start: 812631
End: 813467
Strand: Direct
Name: glnH1 [H]
Synonym: lp_0881
Alternate gene names: 28377714
Gene position: 812631-813467 (Clockwise)
Preceding gene: 28377713
Following gene: 28377715
Centisome position: 24.56
GC content: 47.19
Gene sequence:
>837_bases ATGAAGAAGCTGAAACGACTAATTGGCGCACTCGGCATGCTTGCCATGCTAGTGGTGGTCTTAACCGCTTGCGGTTCACG GCAATCATTAGCAAAACAGGATGTTTTGACCAATGATAAAGCTAGTAAGACGATTACGTGGGGTGTTAAAGCTGATACGA AATTATTTGGGTTGATGGACGTTAAAGATAATCAAATCAAGGGGTTTGACGCCGACATTGCGACGGCATTAACAAAGCGG GTGCTCGGTAAGAATGCTACCGCCAAGTTTGTCCAAGTAACGAGTCAAACGCGGATTCCATTGTTGAAGAATGGGAACAT TGATGCCATTCTCGCCACGATGACTATCACGCCGGAACGTGAAAAACAGGTTGATTTTACGAATTCATACTTTGATGCGG GGCAATCACTGTTGGTTAAAAAGGGCAGTGCCATAAAATCAGTTAAGGATTTGAATAAGTCGGGCACCAAGGTCCTTGGT GTGACCGGTGCAAACTCCGTTGAGAACATTAAGAAAGCAGCGCCTAAGGCTAAGGTGTTGGAATTATCCGACTATGCTCA GGCAATGACGGCGTTGAAATCTGGTCAGGGGGTCGCGTTGACTACTGATAACGGGATTCTTTACGGGATGGCGTCGCAAA ACCCAGGGTACGAAGTGGTTGGGGGCACCTTCACGAAAGAACCATACGGGATCGCTGTTAATAAGGGTCAGGAACCGTTA AAAAAGGCTCTGAATAAAGCGCTCAAAGAAATTGAAGCGGACGGGACGTACAACCGCATCTTGAAGAAGTGGTTTGGTAA CGTGGCCGGCTTCGACTATAAGGAGGCGTCACGCTAA
Upstream 100 bases:
>100_bases ATGCTAAAGAAAAGTTCTTTGATGGTCAGCCGTCTAATGAACGGGCCCGTCAATTCTTGAGTAAAATTATTACACACTAA TTTGTAGGGGAGGACCACGA
Downstream 100 bases:
>100_bases TGGGATACATTCTAACGCACTATTGGTCAGAGCTGATTCAAGGACTCGGATATACGTTGTTATCCAGTGTGATTGCTTTG GTATTCAGTACGATCATCGG
Product: glutamine ABC transporter, substrate binding protein
Products: ADP; phosphate; L-arginine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MKKLKRLIGALGMLAMLVVVLTACGSRQSLAKQDVLTNDKASKTITWGVKADTKLFGLMDVKDNQIKGFDADIATALTKR VLGKNATAKFVQVTSQTRIPLLKNGNIDAILATMTITPEREKQVDFTNSYFDAGQSLLVKKGSAIKSVKDLNKSGTKVLG VTGANSVENIKKAAPKAKVLELSDYAQAMTALKSGQGVALTTDNGILYGMASQNPGYEVVGGTFTKEPYGIAVNKGQEPL KKALNKALKEIEADGTYNRILKKWFGNVAGFDYKEASR
Sequences:
>Translated_278_residues MKKLKRLIGALGMLAMLVVVLTACGSRQSLAKQDVLTNDKASKTITWGVKADTKLFGLMDVKDNQIKGFDADIATALTKR VLGKNATAKFVQVTSQTRIPLLKNGNIDAILATMTITPEREKQVDFTNSYFDAGQSLLVKKGSAIKSVKDLNKSGTKVLG VTGANSVENIKKAAPKAKVLELSDYAQAMTALKSGQGVALTTDNGILYGMASQNPGYEVVGGTFTKEPYGIAVNKGQEPL KKALNKALKEIEADGTYNRILKKWFGNVAGFDYKEASR >Mature_278_residues MKKLKRLIGALGMLAMLVVVLTACGSRQSLAKQDVLTNDKASKTITWGVKADTKLFGLMDVKDNQIKGFDADIATALTKR VLGKNATAKFVQVTSQTRIPLLKNGNIDAILATMTITPEREKQVDFTNSYFDAGQSLLVKKGSAIKSVKDLNKSGTKVLG VTGANSVENIKKAAPKAKVLELSDYAQAMTALKSGQGVALTTDNGILYGMASQNPGYEVVGGTFTKEPYGIAVNKGQEPL KKALNKALKEIEADGTYNRILKKWFGNVAGFDYKEASR
Specific function: Part of the ABC transporter complex glnHMPQ involved in glutamine transport [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787088, Length=230, Percent_Identity=34.7826086956522, Blast_Score=113, Evalue=1e-26, Organism=Escherichia coli, GI1787085, Length=230, Percent_Identity=32.6086956521739, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI1787031, Length=203, Percent_Identity=33.9901477832512, Blast_Score=98, Evalue=6e-22, Organism=Escherichia coli, GI1786876, Length=216, Percent_Identity=30.0925925925926, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1788228, Length=262, Percent_Identity=29.7709923664122, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1788648, Length=210, Percent_Identity=30, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1788649, Length=269, Percent_Identity=27.8810408921933, Blast_Score=76, Evalue=3e-15,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 29869; Mature: 29869
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLKRLIGALGMLAMLVVVLTACGSRQSLAKQDVLTNDKASKTITWGVKADTKLFGLMD CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEEE VKDNQIKGFDADIATALTKRVLGKNATAKFVQVTSQTRIPLLKNGNIDAILATMTITPER CCCCCCCCCCHHHHHHHHHHHHCCCCCHHHEEECCCCCCCEEECCCCCEEEEEEEECCCH EKQVDFTNSYFDAGQSLLVKKGSAIKSVKDLNKSGTKVLGVTGANSVENIKKAAPKAKVL HCCCCCCHHHHHCCCCEEHCCCCHHHHHHHCCCCCCEEEEECCCCHHHHHHHHCCCCEEE ELSDYAQAMTALKSGQGVALTTDNGILYGMASQNPGYEVVGGTFTKEPYGIAVNKGQEPL EHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCCEEECCEECCCCCCEEECCCHHHH KKALNKALKEIEADGTYNRILKKWFGNVAGFDYKEASR HHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHCCC >Mature Secondary Structure MKKLKRLIGALGMLAMLVVVLTACGSRQSLAKQDVLTNDKASKTITWGVKADTKLFGLMD CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEEE VKDNQIKGFDADIATALTKRVLGKNATAKFVQVTSQTRIPLLKNGNIDAILATMTITPER CCCCCCCCCCHHHHHHHHHHHHCCCCCHHHEEECCCCCCCEEECCCCCEEEEEEEECCCH EKQVDFTNSYFDAGQSLLVKKGSAIKSVKDLNKSGTKVLGVTGANSVENIKKAAPKAKVL HCCCCCCHHHHHCCCCEEHCCCCHHHHHHHCCCCCCEEEEECCCCHHHHHHHHCCCCEEE ELSDYAQAMTALKSGQGVALTTDNGILYGMASQNPGYEVVGGTFTKEPYGIAVNKGQEPL EHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCCEEECCEECCCCCCEEECCCHHHH KKALNKALKEIEADGTYNRILKKWFGNVAGFDYKEASR HHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-arginine [Periplasm]; H2O [C]
Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7551042; 9384377 [H]