Click here to switch to the map view.

The map label for this gene is yheO [C]

Identifier: 28377396

GI number: 28377396

Start: 453809

End: 454537

Strand: Direct

Name: yheO [C]

Synonym: lp_0507

Alternate gene names: 28377396

Gene position: 453809-454537 (Clockwise)

Preceding gene: 28377395

Following gene: 28377397

Centisome position: 13.72

GC content: 43.48

Gene sequence:

>729_bases
ATGCAAAAACCATTAACAGCTGAGCAAGAATACGTGCGCGAGTTTATTCCGTTTGTTGATTTTTTAGCAGATATCTTAGG
CCCCAGTAGTGAAGTTGTCCTGAACGACTTGTTGGATTTAAACCACTCCGTTGTGGCAATTCGTAATTCCCACATATCAC
ATCGACAAGTTGGCGATCCTGCAACTGACTTAGCGTTGCGAACGATGAAGGCCGGTAAAGCTGAAAAGCGTGATTATCTA
GCCAACTACAAGGGTGTTTCGCAAGGAAAGCACTCACTACGATCATCAACTTATTTTTTGCGATTAGATGGTGAAATCGT
CGGGATGATTTGTATTAATACGGATGATAGTGCCCTAGACGATCTGCAGGAACAAGTGTTGAAGGTAATGGCGAGTTACA
AACATTTGAACTCACCAACGATTCATCAACTCAAAGGAACACCAGCTAACGAGAAGGCCCATGACACGCCGGTCGCGCCG
GAACATCTAACCACTTCTATCACTGATTTAGCTCGGGAAGTGACCCAGGCTGTCTGTGCTAAGTATGGCGTCTCTGTTGA
ATATTTAAAGCAAAATGAAAAATTAGAAATCGTTCGTAGCTTATACCACCAAGGTTACTTCCTATTGAAGGATTCAGTTA
GTGAAGCCGCCAAAGTGCTCAAAGTCTCTGATCCGAGTGTTTATCGTTATTTGCAGACCGTCAAAGATGAGGATCTCCAG
CAGGATTAA

Upstream 100 bases:

>100_bases
AATTAGATGTTTATATCGTTACATGTATTAACATTTTATCAGTGTGATAAAATAATATTAAGTCATAACGTTGTAAAAAA
ATAGTGAGGTGAGTGCCGTT

Downstream 100 bases:

>100_bases
ACGATGTAATTGTAAGCGATTAACGTCATGAAACCCTGTCAAAATTTAGTTCAGCCATAGTGGCGAAACTGTGAGGAAGC
TACTCTGAGTTCCCGGACAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MQKPLTAEQEYVREFIPFVDFLADILGPSSEVVLNDLLDLNHSVVAIRNSHISHRQVGDPATDLALRTMKAGKAEKRDYL
ANYKGVSQGKHSLRSSTYFLRLDGEIVGMICINTDDSALDDLQEQVLKVMASYKHLNSPTIHQLKGTPANEKAHDTPVAP
EHLTTSITDLAREVTQAVCAKYGVSVEYLKQNEKLEIVRSLYHQGYFLLKDSVSEAAKVLKVSDPSVYRYLQTVKDEDLQ
QD

Sequences:

>Translated_242_residues
MQKPLTAEQEYVREFIPFVDFLADILGPSSEVVLNDLLDLNHSVVAIRNSHISHRQVGDPATDLALRTMKAGKAEKRDYL
ANYKGVSQGKHSLRSSTYFLRLDGEIVGMICINTDDSALDDLQEQVLKVMASYKHLNSPTIHQLKGTPANEKAHDTPVAP
EHLTTSITDLAREVTQAVCAKYGVSVEYLKQNEKLEIVRSLYHQGYFLLKDSVSEAAKVLKVSDPSVYRYLQTVKDEDLQ
QD
>Mature_242_residues
MQKPLTAEQEYVREFIPFVDFLADILGPSSEVVLNDLLDLNHSVVAIRNSHISHRQVGDPATDLALRTMKAGKAEKRDYL
ANYKGVSQGKHSLRSSTYFLRLDGEIVGMICINTDDSALDDLQEQVLKVMASYKHLNSPTIHQLKGTPANEKAHDTPVAP
EHLTTSITDLAREVTQAVCAKYGVSVEYLKQNEKLEIVRSLYHQGYFLLKDSVSEAAKVLKVSDPSVYRYLQTVKDEDLQ
QD

Specific function: Unknown

COG id: COG2964

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yheO [H]

Homologues:

Organism=Escherichia coli, GI87082246, Length=241, Percent_Identity=24.0663900414938, Blast_Score=75, Evalue=4e-15,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013559
- ProDom:   PD037769 [H]

Pfam domain/function: PF08348 PAS_6 [H]

EC number: NA

Molecular weight: Translated: 27131; Mature: 27131

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKPLTAEQEYVREFIPFVDFLADILGPSSEVVLNDLLDLNHSVVAIRNSHISHRQVGDP
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCHHHCCCC
ATDLALRTMKAGKAEKRDYLANYKGVSQGKHSLRSSTYFLRLDGEIVGMICINTDDSALD
HHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCEEEEEECCCEEEEEEECCCCHHHH
DLQEQVLKVMASYKHLNSPTIHQLKGTPANEKAHDTPVAPEHLTTSITDLAREVTQAVCA
HHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
KYGVSVEYLKQNEKLEIVRSLYHQGYFLLKDSVSEAAKVLKVSDPSVYRYLQTVKDEDLQ
HHCCCHHHHHCCCHHHHHHHHHHCCEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
QD
CC
>Mature Secondary Structure
MQKPLTAEQEYVREFIPFVDFLADILGPSSEVVLNDLLDLNHSVVAIRNSHISHRQVGDP
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCHHHCCCC
ATDLALRTMKAGKAEKRDYLANYKGVSQGKHSLRSSTYFLRLDGEIVGMICINTDDSALD
HHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCEEEEEECCCEEEEEEECCCCHHHH
DLQEQVLKVMASYKHLNSPTIHQLKGTPANEKAHDTPVAPEHLTTSITDLAREVTQAVCA
HHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
KYGVSVEYLKQNEKLEIVRSLYHQGYFLLKDSVSEAAKVLKVSDPSVYRYLQTVKDEDLQ
HHCCCHHHHHCCCHHHHHHHHHHCCEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
QD
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]