| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is 28377373
Identifier: 28377373
GI number: 28377373
Start: 427893
End: 428387
Strand: Direct
Name: 28377373
Synonym: lp_0479
Alternate gene names: NA
Gene position: 427893-428387 (Clockwise)
Preceding gene: 28377369
Following gene: 28377374
Centisome position: 12.93
GC content: 48.89
Gene sequence:
>495_bases GTGATCGTAGACGGGCGTTCAGCGTGTGATTTTGAAATATTAGGAGGTCCAAATATGGATGATTTAACAACTGGTGTGCC AGTGGCGATTCATTTAGAGACGCAGGCGCGGCAAGATGACGATACGGCGAACTATGCACTGGATGTCGATGGTCAATTGG TTCAGATGGGTGACGCGTTTTATTTACGGTATAAGGAAGTTAACGATGATGCGCCAGAACCGATTCCAGTGACGATTAAG CTGGCAGCTAATGGGGACGTCGTGTTGACGCGGAGTGCGGAGAACCGACTTCGGTTGCACTTTTCCAATGGTAAACGAGT GCGTGCTCATTATCAAACGCCTATGGGGATGCTACCTGTTGAAACGGTGACGCCGATGTTACGAGTACGGCTACGTGAAC GGCCATTTTCAGGTGAGGTGAACGTTGATTACGATTTATACGCGGGTGAGCAGCTACTTGGTAACTACAAGTTGCGATTG CAATTCACGGCCTAA
Upstream 100 bases:
>100_bases GCATGAATGGCTTATAATTAAACAGGAAGTTTTACGATGGGCGTGATGGGAGTCGCGCGGTCGTGAACGCTGAAAAGGAT ATAGCGAGTGTGGTAACACG
Downstream 100 bases:
>100_bases TTTGGTATTATGTACTATAAACTGTGGAAAGGACGTGCACCAGTTTGGAACTAAAACAATTTGATGGACAAAAAAAGTCC GAATTATCTTTAATCGAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MIVDGRSACDFEILGGPNMDDLTTGVPVAIHLETQARQDDDTANYALDVDGQLVQMGDAFYLRYKEVNDDAPEPIPVTIK LAANGDVVLTRSAENRLRLHFSNGKRVRAHYQTPMGMLPVETVTPMLRVRLRERPFSGEVNVDYDLYAGEQLLGNYKLRL QFTA
Sequences:
>Translated_164_residues MIVDGRSACDFEILGGPNMDDLTTGVPVAIHLETQARQDDDTANYALDVDGQLVQMGDAFYLRYKEVNDDAPEPIPVTIK LAANGDVVLTRSAENRLRLHFSNGKRVRAHYQTPMGMLPVETVTPMLRVRLRERPFSGEVNVDYDLYAGEQLLGNYKLRL QFTA >Mature_164_residues MIVDGRSACDFEILGGPNMDDLTTGVPVAIHLETQARQDDDTANYALDVDGQLVQMGDAFYLRYKEVNDDAPEPIPVTIK LAANGDVVLTRSAENRLRLHFSNGKRVRAHYQTPMGMLPVETVTPMLRVRLRERPFSGEVNVDYDLYAGEQLLGNYKLRL QFTA
Specific function: Unknown
COG id: COG4506
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18371; Mature: 18371
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVDGRSACDFEILGGPNMDDLTTGVPVAIHLETQARQDDDTANYALDVDGQLVQMGDAF CEECCCCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCEEEEECCEE YLRYKEVNDDAPEPIPVTIKLAANGDVVLTRSAENRLRLHFSNGKRVRAHYQTPMGMLPV EEEEEECCCCCCCCEEEEEEEECCCCEEEEECCCCEEEEEECCCCEEEEEECCCCCCCCH ETVTPMLRVRLRERPFSGEVNVDYDLYAGEQLLGNYKLRLQFTA HHHCHHHHHHHHCCCCCCCEEEEEEEECCCEEECCEEEEEEEEC >Mature Secondary Structure MIVDGRSACDFEILGGPNMDDLTTGVPVAIHLETQARQDDDTANYALDVDGQLVQMGDAF CEECCCCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCEEEEECCEE YLRYKEVNDDAPEPIPVTIKLAANGDVVLTRSAENRLRLHFSNGKRVRAHYQTPMGMLPV EEEEEECCCCCCCCEEEEEEEECCCCEEEEECCCCEEEEEECCCCEEEEEECCCCCCCCH ETVTPMLRVRLRERPFSGEVNVDYDLYAGEQLLGNYKLRLQFTA HHHCHHHHHHHHCCCCCCCEEEEEEEECCCEEECCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA