Definition Lactobacillus plantarum WCFS1, complete genome.
Accession NC_004567
Length 3,308,274

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The map label for this gene is 28377293

Identifier: 28377293

GI number: 28377293

Start: 350484

End: 351401

Strand: Direct

Name: 28377293

Synonym: lp_0379

Alternate gene names: NA

Gene position: 350484-351401 (Clockwise)

Preceding gene: 28377292

Following gene: 28377294

Centisome position: 10.59

GC content: 40.74

Gene sequence:

>918_bases
TTGACAAAAAGATTGAGTGAACAGGAAAGTTACTTTTCAATGTCTGAGTTTTTGGATTCTTATTATTGGGCAAGCAAAGA
TGATAGCCTCGGAAGTTTATTGGGGAGCGTCACGTTATGGAGTGATGATGGGGAATTGTTTGATCAGGCAATTGCGGAGG
ACTGGCATACTTTCTTTGGCGACGTGAGCAACGAAAATCACACTGTGTTTGAGAGTTTTCAAGCTGTCAAGCAGTTTGTG
AATGAGTATTTGCCGGATATCGCAGCAACGACACCAGTATCAGGAAGCTTGACGTATAACATTAGAATAATTTGTGAGAT
GACAGAATCTCAACGAAATCAGGAACCCGTGTGGCAAAATTGGGTCGCAGCTGTTAATTGGATTACGAATCCTAATGTTG
TGCCAGTCAATGAATCGCCCTTTCTTAAAACGGGGCAATCATTGCCTAATCCAAAGGAAAAGGGTTTTCGGCAAAATCAA
TTTCCAATTGCCAAGGTTTTGCCAGCGCCACGACCAGAAATTCCGATGGGGCCCAGTCTGGAAAAGGTGGACTTGACACA
GTCGTATTATGCGTTTGTGAAATTTTTACAGCATTATTATCAGGTTAGTGATGATAGTGAATTGGGTAATTTTTTGCAGC
AAAATAGAGCTATCAGTGAAAATAATGAAGAATATCGCTATTGGAAGGGGAAGTTTTCGAGATGCTCTGGTAATAAAAAG
CTATTAGATATTTTGAAGGCCTTCTTAATGGTAAGGGATTATTTTGAAATTGAATTTCCGGACAATGCACTGCATACGCA
TCCTGTACGTAAATTGAGTTGTAATCTCTGGAAGGCAGCGTATCTGCCACACAGCCAACGTATTCAGACTGAGGTTTGGC
AGAATTGGTTAACGGCAGTTCATCAAGTAATAGAGTAA

Upstream 100 bases:

>100_bases
GTAAAATAACTGATGGTGGTATTAACAGCCGACCAGTTCCTGTTATGAAAGATGGAATGCATAAGGTTTCTTGGTATATC
AAGAATGGAGTGAAATTACC

Downstream 100 bases:

>100_bases
GTGACAATGTCATTTGATAATCAGTTGAGTTCTCAATTTAAAGATCAAGAGGATAGTTATAATGCGATTATTTTGTTGTA
TGATTATAGCTATGATAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MTKRLSEQESYFSMSEFLDSYYWASKDDSLGSLLGSVTLWSDDGELFDQAIAEDWHTFFGDVSNENHTVFESFQAVKQFV
NEYLPDIAATTPVSGSLTYNIRIICEMTESQRNQEPVWQNWVAAVNWITNPNVVPVNESPFLKTGQSLPNPKEKGFRQNQ
FPIAKVLPAPRPEIPMGPSLEKVDLTQSYYAFVKFLQHYYQVSDDSELGNFLQQNRAISENNEEYRYWKGKFSRCSGNKK
LLDILKAFLMVRDYFEIEFPDNALHTHPVRKLSCNLWKAAYLPHSQRIQTEVWQNWLTAVHQVIE

Sequences:

>Translated_305_residues
MTKRLSEQESYFSMSEFLDSYYWASKDDSLGSLLGSVTLWSDDGELFDQAIAEDWHTFFGDVSNENHTVFESFQAVKQFV
NEYLPDIAATTPVSGSLTYNIRIICEMTESQRNQEPVWQNWVAAVNWITNPNVVPVNESPFLKTGQSLPNPKEKGFRQNQ
FPIAKVLPAPRPEIPMGPSLEKVDLTQSYYAFVKFLQHYYQVSDDSELGNFLQQNRAISENNEEYRYWKGKFSRCSGNKK
LLDILKAFLMVRDYFEIEFPDNALHTHPVRKLSCNLWKAAYLPHSQRIQTEVWQNWLTAVHQVIE
>Mature_304_residues
TKRLSEQESYFSMSEFLDSYYWASKDDSLGSLLGSVTLWSDDGELFDQAIAEDWHTFFGDVSNENHTVFESFQAVKQFVN
EYLPDIAATTPVSGSLTYNIRIICEMTESQRNQEPVWQNWVAAVNWITNPNVVPVNESPFLKTGQSLPNPKEKGFRQNQF
PIAKVLPAPRPEIPMGPSLEKVDLTQSYYAFVKFLQHYYQVSDDSELGNFLQQNRAISENNEEYRYWKGKFSRCSGNKKL
LDILKAFLMVRDYFEIEFPDNALHTHPVRKLSCNLWKAAYLPHSQRIQTEVWQNWLTAVHQVIE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35419; Mature: 35288

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKRLSEQESYFSMSEFLDSYYWASKDDSLGSLLGSVTLWSDDGELFDQAIAEDWHTFFG
CCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHC
DVSNENHTVFESFQAVKQFVNEYLPDIAATTPVSGSLTYNIRIICEMTESQRNQEPVWQN
CCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCEEEEEEEEEEECHHCCCCCHHHHH
WVAAVNWITNPNVVPVNESPFLKTGQSLPNPKEKGFRQNQFPIAKVLPAPRPEIPMGPSL
HHHHHHCCCCCCEEECCCCCCHHCCCCCCCHHHHCCCCCCCCHHHHCCCCCCCCCCCCCC
EKVDLTQSYYAFVKFLQHYYQVSDDSELGNFLQQNRAISENNEEYRYWKGKFSRCSGNKK
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHCCCHHHCCCCHH
LLDILKAFLMVRDYFEIEFPDNALHTHPVRKLSCNLWKAAYLPHSQRIQTEVWQNWLTAV
HHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
HQVIE
HHHHC
>Mature Secondary Structure 
TKRLSEQESYFSMSEFLDSYYWASKDDSLGSLLGSVTLWSDDGELFDQAIAEDWHTFFG
CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHC
DVSNENHTVFESFQAVKQFVNEYLPDIAATTPVSGSLTYNIRIICEMTESQRNQEPVWQN
CCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCEEEEEEEEEEECHHCCCCCHHHHH
WVAAVNWITNPNVVPVNESPFLKTGQSLPNPKEKGFRQNQFPIAKVLPAPRPEIPMGPSL
HHHHHHCCCCCCEEECCCCCCHHCCCCCCCHHHHCCCCCCCCHHHHCCCCCCCCCCCCCC
EKVDLTQSYYAFVKFLQHYYQVSDDSELGNFLQQNRAISENNEEYRYWKGKFSRCSGNKK
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHCCCHHHCCCCHH
LLDILKAFLMVRDYFEIEFPDNALHTHPVRKLSCNLWKAAYLPHSQRIQTEVWQNWLTAV
HHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
HQVIE
HHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA