| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is 28377289
Identifier: 28377289
GI number: 28377289
Start: 347267
End: 349054
Strand: Direct
Name: 28377289
Synonym: lp_0374
Alternate gene names: NA
Gene position: 347267-349054 (Clockwise)
Preceding gene: 28377288
Following gene: 28377290
Centisome position: 10.5
GC content: 44.18
Gene sequence:
>1788_bases ATGATAAAATTACGCCAGGTTCTTAAAAAAATCCTCATTGGCCTAATGGTGTTTGTTCTAGTTTTCACGGCTTTTTCCAG CTCGGTCGACACAGTCTCCGCACATCGCCGTGGTGTGACCCACACTCGGAAGCATAAGGTGCGACATAGCGCTAGTGGTC ACGCCAAGAAGTCTCATCGTGCACATCGCAAAGCTAAGCGCAGAGTCGTCCACCGTAAAGCACCGCATCGGCGGAAAGTT GCGGTAAGGCATAAGAAAAAAACGCCAAAGCGTCATAAAAAGGCGCATAAGAAGAAGGCCGCTAAGAAACATAAGAAGTC CCATAAAAAGAAAGCGGTCAAGAAGCACAAAAAGTCACACAAGAAGAAAGCGGCTAAGAAACATAAGAAGTCGCACAAGA AGAAAGCGGCCAAGAAACATAAGAAGTCGCACAAGAAGAAAGCGGCCAAGAAACATAAGAAGTCGCACAAGAAGAAAGCG GCTAAGAAGCATGGCAAGTCGCACAAGAAGAAAGCGGCCAAGAAGCATAAGAAGTCGCACAAGAAGAAATCTTCTAAGAA ACACGGCAAGTCCAGTAAGAAGAAGTCTTCCAAGAAACATGGCAAGTCGCACAAGAAGAAGTCTTCTAAGAAGCATGGTA AGTCCAGTAAGAAGAAGTCTTCCAAGAAACACGGCAAGTCCAGTAAGAAGAAGTCTTCCAAGAAACATGGCAAGTCGCAC AAGAAGAAATCTTCCAAGAAGCACGGCAAGTCCAATAAGAAGAAATCTTCCAAGAAGCATGGTAAATCCAGTAAGAAGAA ATCATCTAAGAAACACGGCAAGTCTAACAAGAAAAAATCTTCGAAAAAGCATGCATCCAAAGGTAGTGCTGTAATTGCCA CGCTTAGTCGTAAGACCGGTATCAGTAAAGGCATCATTTCGCTTTTGACGGATCTAGTTGGGTATAATGATATTTATACC ATGATTACGGGAAAAGATGCCGCTACCGGTAAGAAGCGCTCGCGGTTAGTAGGAGCGGCTTGGACAGCCTTGAACTTTGT GCCTGTCTCGAAAGTCGCTAAGTTAGCAAAGGCCGCGAAGGTTCTGGCAACTGCTAAGAAGGCCGAGAAAGTTGCGAAGA ATGGTGGCCGGATCAAACGGGCCGCTCGAGCAACTAAACTGGCGACGAAGCGAGCGGCCGAGAAACTAGCTAAACGAAAG CCCGCCAGAAAGACTGCGAAAAAGGCAGCTGAAGAGGCTCGTAAAGCTAAAAAGGTCAAGCCTGCCAAAAAAGCTAAGCA TCAACAGGCGAAGCCCAAAAAGACCTCCCATGGTACGAAGCATAAAACGACCAAGAAGCAGCAGAAGCGATATAACAAGA AAAAAGCTGCGGGCAAGGCTAGGAAAGCTTCGTATGCAAGGAAAAAAGGCGGTACTAAGAAGAAGCCGGGCAAGCGTAAG GGTGCTAAAGCCAAGACTACAAAACGAAAGACTAAGAATAAGGTCAAGAGGGACAATGCTGATACCTCTAAAAGCGTTGG AAATCCGGTAAAAGTTGAAGGAAGAGGTAATACGGGAAGAACAAAACCTAATAATTTAAAAGAACAGATGGCAATGCATC AAGTACAATCTAATCCACTTAAGGGTGCTAAAAAGCTACCTGTAAAAATGACTGATAAACGATGGCCTAGTGAGGAAGGA TGGGTTAAAATGCAAAATGTCATTACTTTGGGTGATGGGACAAAAGTTAATGTACATTTTGTGTACAATAAGATTACTGG AAAATTTGATGATTTCAAATTTAAATAG
Upstream 100 bases:
>100_bases AACTCCGCGGTCGCAACCTGGTTGGTCTGGCTAGGAGTGGGTTTGTTGCTACTCACTGTAGCGATTACGATGGTTATTAA GAAACGAGGGCGTGACTAAT
Downstream 100 bases:
>100_bases AGGAGAAAATATAAATGAGTAATTTAAAAATATTAAAGAATTGGGGAGATAATAATTTATTGGAACTAAGTGTTAGTGCA GAATCAGAATTTGTAACAAT
Product: extracellular protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 595; Mature: 595
Protein sequence:
>595_residues MIKLRQVLKKILIGLMVFVLVFTAFSSSVDTVSAHRRGVTHTRKHKVRHSASGHAKKSHRAHRKAKRRVVHRKAPHRRKV AVRHKKKTPKRHKKAHKKKAAKKHKKSHKKKAVKKHKKSHKKKAAKKHKKSHKKKAAKKHKKSHKKKAAKKHKKSHKKKA AKKHGKSHKKKAAKKHKKSHKKKSSKKHGKSSKKKSSKKHGKSHKKKSSKKHGKSSKKKSSKKHGKSSKKKSSKKHGKSH KKKSSKKHGKSNKKKSSKKHGKSSKKKSSKKHGKSNKKKSSKKHASKGSAVIATLSRKTGISKGIISLLTDLVGYNDIYT MITGKDAATGKKRSRLVGAAWTALNFVPVSKVAKLAKAAKVLATAKKAEKVAKNGGRIKRAARATKLATKRAAEKLAKRK PARKTAKKAAEEARKAKKVKPAKKAKHQQAKPKKTSHGTKHKTTKKQQKRYNKKKAAGKARKASYARKKGGTKKKPGKRK GAKAKTTKRKTKNKVKRDNADTSKSVGNPVKVEGRGNTGRTKPNNLKEQMAMHQVQSNPLKGAKKLPVKMTDKRWPSEEG WVKMQNVITLGDGTKVNVHFVYNKITGKFDDFKFK
Sequences:
>Translated_595_residues MIKLRQVLKKILIGLMVFVLVFTAFSSSVDTVSAHRRGVTHTRKHKVRHSASGHAKKSHRAHRKAKRRVVHRKAPHRRKV AVRHKKKTPKRHKKAHKKKAAKKHKKSHKKKAVKKHKKSHKKKAAKKHKKSHKKKAAKKHKKSHKKKAAKKHKKSHKKKA AKKHGKSHKKKAAKKHKKSHKKKSSKKHGKSSKKKSSKKHGKSHKKKSSKKHGKSSKKKSSKKHGKSSKKKSSKKHGKSH KKKSSKKHGKSNKKKSSKKHGKSSKKKSSKKHGKSNKKKSSKKHASKGSAVIATLSRKTGISKGIISLLTDLVGYNDIYT MITGKDAATGKKRSRLVGAAWTALNFVPVSKVAKLAKAAKVLATAKKAEKVAKNGGRIKRAARATKLATKRAAEKLAKRK PARKTAKKAAEEARKAKKVKPAKKAKHQQAKPKKTSHGTKHKTTKKQQKRYNKKKAAGKARKASYARKKGGTKKKPGKRK GAKAKTTKRKTKNKVKRDNADTSKSVGNPVKVEGRGNTGRTKPNNLKEQMAMHQVQSNPLKGAKKLPVKMTDKRWPSEEG WVKMQNVITLGDGTKVNVHFVYNKITGKFDDFKFK >Mature_595_residues MIKLRQVLKKILIGLMVFVLVFTAFSSSVDTVSAHRRGVTHTRKHKVRHSASGHAKKSHRAHRKAKRRVVHRKAPHRRKV AVRHKKKTPKRHKKAHKKKAAKKHKKSHKKKAVKKHKKSHKKKAAKKHKKSHKKKAAKKHKKSHKKKAAKKHKKSHKKKA AKKHGKSHKKKAAKKHKKSHKKKSSKKHGKSSKKKSSKKHGKSHKKKSSKKHGKSSKKKSSKKHGKSSKKKSSKKHGKSH KKKSSKKHGKSNKKKSSKKHGKSSKKKSSKKHGKSNKKKSSKKHASKGSAVIATLSRKTGISKGIISLLTDLVGYNDIYT MITGKDAATGKKRSRLVGAAWTALNFVPVSKVAKLAKAAKVLATAKKAEKVAKNGGRIKRAARATKLATKRAAEKLAKRK PARKTAKKAAEEARKAKKVKPAKKAKHQQAKPKKTSHGTKHKTTKKQQKRYNKKKAAGKARKASYARKKGGTKKKPGKRK GAKAKTTKRKTKNKVKRDNADTSKSVGNPVKVEGRGNTGRTKPNNLKEQMAMHQVQSNPLKGAKKLPVKMTDKRWPSEEG WVKMQNVITLGDGTKVNVHFVYNKITGKFDDFKFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66564; Mature: 66564
Theoretical pI: Translated: 12.37; Mature: 12.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKLRQVLKKILIGLMVFVLVFTAFSSSVDTVSAHRRGVTHTRKHKVRHSASGHAKKSHR CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHH AHRKAKRRVVHRKAPHRRKVAVRHKKKTPKRHKKAHKKKAAKKHKKSHKKKAVKKHKKSH HHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKKAAKKHKKSHKKKAAKKHKKSHKKKAAKKHKKSHKKKAAKKHGKSHKKKAAKKHKKSH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH KKKSSKKHGKSSKKKSSKKHGKSHKKKSSKKHGKSSKKKSSKKHGKSSKKKSSKKHGKSH HHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCHHH KKKSSKKHGKSNKKKSSKKHGKSSKKKSSKKHGKSNKKKSSKKHASKGSAVIATLSRKTG HHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEHHHHHHC ISKGIISLLTDLVGYNDIYTMITGKDAATGKKRSRLVGAAWTALNFVPVSKVAKLAKAAK HHHHHHHHHHHHHCCCCCEEEEECCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLATAKKAEKVAKNGGRIKRAARATKLATKRAAEKLAKRKPARKTAKKAAEEARKAKKVK HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC PAKKAKHQQAKPKKTSHGTKHKTTKKQQKRYNKKKAAGKARKASYARKKGGTKKKPGKRK HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC GAKAKTTKRKTKNKVKRDNADTSKSVGNPVKVEGRGNTGRTKPNNLKEQMAMHQVQSNPL CCCHHHHHHHHHHHHHHCCCCHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCC KGAKKLPVKMTDKRWPSEEGWVKMQNVITLGDGTKVNVHFVYNKITGKFDDFKFK CCCCCCCCEECCCCCCCCCCCEEECCEEEECCCCEEEEEEEEECCCCCCCCCCCC >Mature Secondary Structure MIKLRQVLKKILIGLMVFVLVFTAFSSSVDTVSAHRRGVTHTRKHKVRHSASGHAKKSHR CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHH AHRKAKRRVVHRKAPHRRKVAVRHKKKTPKRHKKAHKKKAAKKHKKSHKKKAVKKHKKSH HHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKKAAKKHKKSHKKKAAKKHKKSHKKKAAKKHKKSHKKKAAKKHGKSHKKKAAKKHKKSH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH KKKSSKKHGKSSKKKSSKKHGKSHKKKSSKKHGKSSKKKSSKKHGKSSKKKSSKKHGKSH HHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCHHH KKKSSKKHGKSNKKKSSKKHGKSSKKKSSKKHGKSNKKKSSKKHASKGSAVIATLSRKTG HHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEHHHHHHC ISKGIISLLTDLVGYNDIYTMITGKDAATGKKRSRLVGAAWTALNFVPVSKVAKLAKAAK HHHHHHHHHHHHHCCCCCEEEEECCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLATAKKAEKVAKNGGRIKRAARATKLATKRAAEKLAKRKPARKTAKKAAEEARKAKKVK HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC PAKKAKHQQAKPKKTSHGTKHKTTKKQQKRYNKKKAAGKARKASYARKKGGTKKKPGKRK HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC GAKAKTTKRKTKNKVKRDNADTSKSVGNPVKVEGRGNTGRTKPNNLKEQMAMHQVQSNPL CCCHHHHHHHHHHHHHHCCCCHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCC KGAKKLPVKMTDKRWPSEEGWVKMQNVITLGDGTKVNVHFVYNKITGKFDDFKFK CCCCCCCCEECCCCCCCCCCCEEECCEEEECCCCEEEEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA