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The map label for this gene is bioY [H]

Identifier: 28377256

GI number: 28377256

Start: 308282

End: 308845

Strand: Direct

Name: bioY [H]

Synonym: lp_0336

Alternate gene names: 28377256

Gene position: 308282-308845 (Clockwise)

Preceding gene: 28377255

Following gene: 28377257

Centisome position: 9.32

GC content: 49.82

Gene sequence:

>564_bases
ATGACGAATCGACAGACGATTAAACACCTGACCCAGACGGCGATGGTGACCGCTTTGATTATTGTATTAGGTTTCTTTCC
GGGAATTCCAGTGGGCTTTATTCCCGTCCCGATTGTGTTGCAGAATATGGGCATCTTTTTAGCCGCCGAGTTACTTGGCC
GCAAATATGGGACGATCGCAGTTGGATTGTTCTTAGGATTAGTGGCACTGGGACTACCCCTATTATCTGGGGGGCGTGGG
GGTGCCGCGATTTTTCTCGGGCCAACGGGTGGCTATCTCGTTGCTTGGTTGCTGGCACCAATGCTGATTGGAACGTTGAT
CAAAATAACTCGGGCGATGACAAGTGGTTATTGGTGGCTAGAAGTTGGCATTGTCTGGTTGGCTGGTATCTTATTTGTTG
ATGTAATCGGTGCTAGTTGGCTAGCTGTTCAGTCTCATATGACTTTGACGGCCGCCTTGCTGTCGAACGTGGCCTTTCTT
CCTGGTGACATCATTAAAGGGACTTTGGCCGTATTTATTGCCCGGCGTGTGCGGGCCATCGTTGATTTTGGATTGCCAGC
TTAG

Upstream 100 bases:

>100_bases
GTCATGGGATTTTTTGTTTTCTAAACAGTAACCCATGATGTTGATATTGGGTTACTGTTGTTTTATAATAGCGTTTAAAT
TGATTAACAGGGGTGCGATG

Downstream 100 bases:

>100_bases
TAAATAGCTAATGTGATTGGCAGGTCAGGAGGTCATAATGACAACTAAAGAACAGGTCTTAACAATTTTATTGCGTCATC
ATGGTGAGTGGCAATCGGGG

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MTNRQTIKHLTQTAMVTALIIVLGFFPGIPVGFIPVPIVLQNMGIFLAAELLGRKYGTIAVGLFLGLVALGLPLLSGGRG
GAAIFLGPTGGYLVAWLLAPMLIGTLIKITRAMTSGYWWLEVGIVWLAGILFVDVIGASWLAVQSHMTLTAALLSNVAFL
PGDIIKGTLAVFIARRVRAIVDFGLPA

Sequences:

>Translated_187_residues
MTNRQTIKHLTQTAMVTALIIVLGFFPGIPVGFIPVPIVLQNMGIFLAAELLGRKYGTIAVGLFLGLVALGLPLLSGGRG
GAAIFLGPTGGYLVAWLLAPMLIGTLIKITRAMTSGYWWLEVGIVWLAGILFVDVIGASWLAVQSHMTLTAALLSNVAFL
PGDIIKGTLAVFIARRVRAIVDFGLPA
>Mature_186_residues
TNRQTIKHLTQTAMVTALIIVLGFFPGIPVGFIPVPIVLQNMGIFLAAELLGRKYGTIAVGLFLGLVALGLPLLSGGRGG
AAIFLGPTGGYLVAWLLAPMLIGTLIKITRAMTSGYWWLEVGIVWLAGILFVDVIGASWLAVQSHMTLTAALLSNVAFLP
GDIIKGTLAVFIARRVRAIVDFGLPA

Specific function: Probable biotin transporter [H]

COG id: COG1268

COG function: function code R; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BioY family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003784 [H]

Pfam domain/function: PF02632 BioY [H]

EC number: NA

Molecular weight: Translated: 19752; Mature: 19621

Theoretical pI: Translated: 10.90; Mature: 10.90

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNRQTIKHLTQTAMVTALIIVLGFFPGIPVGFIPVPIVLQNMGIFLAAELLGRKYGTIA
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH
VGLFLGLVALGLPLLSGGRGGAAIFLGPTGGYLVAWLLAPMLIGTLIKITRAMTSGYWWL
HHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
EVGIVWLAGILFVDVIGASWLAVQSHMTLTAALLSNVAFLPGDIIKGTLAVFIARRVRAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHH
VDFGLPA
HHCCCCC
>Mature Secondary Structure 
TNRQTIKHLTQTAMVTALIIVLGFFPGIPVGFIPVPIVLQNMGIFLAAELLGRKYGTIA
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH
VGLFLGLVALGLPLLSGGRGGAAIFLGPTGGYLVAWLLAPMLIGTLIKITRAMTSGYWWL
HHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
EVGIVWLAGILFVDVIGASWLAVQSHMTLTAALLSNVAFLPGDIIKGTLAVFIARRVRAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHH
VDFGLPA
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]