| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is tagF2 [H]
Identifier: 28377195
GI number: 28377195
Start: 244771
End: 247602
Strand: Direct
Name: tagF2 [H]
Synonym: lp_0269
Alternate gene names: 28377195
Gene position: 244771-247602 (Clockwise)
Preceding gene: 28377194
Following gene: 28377196
Centisome position: 7.4
GC content: 36.97
Gene sequence:
>2832_bases ATGATATATATTATGGGAAAGATGAATACCATCAAACTCGCGTGTAAGTTTGTTGCACGGCCAATTCGGGAGTTTGTAAC TAAGCCGGCAATTCGTCAAATTAATGTTTATTTATACTATGTGAAACATAGCAAAGTTCAAGAAAAGGCTGTTTTCTTGG AATCGTATCATGCTGTCAATTTGACTGGAAATGTGTATGCGATGTATCAAAAGATGGTACAAGAATATCCGGATTATACG TACTATTGGGCATACAAAGACAAAGATACAATTCCTGCGGATATTATGGCGGATACCAAGAGACATCGGGTATATTTAGT TAAGTACGAATCACGTCAGTATATGAAAGCCTTAGCTACCTCAAAGTATTTAATTAACGATACTTCTTTCATGCCCTATT TTATCAAAAGGGATGGGCAACGGTATCTGAATACTTGGCACGGGACACCCTTAAAAACACTGGGATTAGATATTAAGGGT TCAGGTAGGGCAGACCATAAGAACATTCAGCGTAATTTATTGGCAGCTGATGTCTTAGCTATGCCTAATCAGTTTACGGC TGAGCATTTAATTACGAGCCATGATTTAAACGGTATTTTTCCAAATGAAGTTTATATTACTGGTAATCCACGAGTTGATA ACTTACTGGGGACACTAGTTTCCGAGGATACGCAAGCGTTGAAAGAGCGCTTGGGGCTTCCAGCTGAAAAGATAATCTTG TATGCGCCAACTTGGAAAAAAGATGTGGAATATACTACTGAAGCTGATATTTTACAGTTGTTAAATGAAGTCCAACGATT GCAGGAACGTGTCCCATCTGGCTACAAAGTATTTTTAAAAGTACATTATTTTATTTATGATAAATTAGTTGAAATGGGAT ATGGTGATCAATTAATTTCAAATGCCATTGATACCAATACATTGTTACGTGGTGTGGATGTATTGATTACGGATTATTCC AGTATCTTTTTCGACTTTTTGCCGATTAAACGACCTGTTATGTTTTATGTTCCTGATAAGGATAGTTACGCACAGAACCG AGGCTTTTACAAGTCGCTTGATACACTTCCGGGACTGGTCACGGATAAGTTTGATCAATTGCTTGATGACTGTAATCAAA AATACTTTGATTCGTGGGCCAAGACTTACGAACAACAGTACAATGATTATAAATCCGAATTCTTGAGTTATGATGACGGA CAAGCGACTGATCGTGCAGTGCAAGTATTGTTTGAAGAGTCGTCATCGATTGAGCGACTTGATTTCAACAATAATAAAAA GAAGTTATTGATTTATGCTGGAGGTTTCTATAATAACGGGATTACAAATTCTATTATTAATTTGTCTAGAAACTTTGACA CTAATAAATATGAATTAGTATTTGTTGATTATCCGCGGATGCGCCCTGAAAAAGAATATAATATGAATCGCTTACCCGAC AGCGTGCACTTTATTTTTAATTTTTCATGGGCAACTAGAACATTCTTTGATACTTATAATCAGAACACTAGCTACCACTT CGGATTTAATTCAAAGTTAGTTAACCAAAATAAGATGAAGGCAACGTACCAGCTGAATTTTAGGCGTATCTTTGGTAACT TTATGCCATACGAAGTTATTGACTTTGGTGGTTACAACAAAGCTATTACTGGATTATTTGCTTTATCACCGGTTCCAAAA AAGGTTGTCTTTCTACACAATACTATGTGGGATGAATATAATAAAATTGTTAATGGGCGATACAAGCATCGTAAGAATCT GCGTGTTACGTTTACTTACTATCAATATTTTGACAAAATTATTTCAGTTTCCCAATCAGCTGATAAACAAAATCGAGAAG ATTTGAGTCAGTATGCTGATTCTGCTAAGTTTACATGGGTTGAGAATTTAGTTAATGGCGCCGAAATTGAAAAAGAATTA TCTGAGGTAAAGCAACAAGTGGATAATGGTGATTCACTGATAGAGCTTACTAAAACAGAGACACCAAGCGGAATTATTAC AACTCAATTATTTCATCCTGTAGATCAGAATTATTTTAATTTTGTGACGGTGGCAAGACTGTCTCCTGAAAAGAATCATT TAGGATTAATCCAAGCATTTAAGTTAGTACATGATAATTATCCGAAGACGCGATTATATATTGTCGGAAATGGTCCAATA CGACTGGAAGTAGAGCAACTTATTTCCGGTTTAGGATTAGATGAATCGGTGTTCATGATGGGGTTTTTGCAGCATCCAAT GAAATTTGTGTCATTTACTGATTATGTTGTACTGCCATCAGTTACAGAGGGTCAAGGGCTTGCTATTATTGAAGCTTTGC TTGCACACAAGCCGGTTGTTGGAACAGATGTTGCTGGTATTCAAGATGTAATCAAGGGCGGACGTTTTGGCTTGCTGAGC GGTAAAAATGCCGTAGCAAATCCAAATAGTTTGGCGAATACTTTAGCTCTCTCAATTGAGACCAAGGACAGTATCAAGTA TGTAAAAACTGTAAAAGAGCCATTGAAAATCTTCCATGCTGAAACCCAAGTTGACGGTAAATGGGTTACTAGCTCAGATG ATTGGGAAAATCCAGATATCGTTTTGGGAAATGGTAGCAACGGGCGTGCATTCGTTGAAATTAAACACGTTGAAAGTTAC CCGAATTACGCAGTGTTTATTGACGGAAAGCGTGCCGCTCAGAACGGTCAACTTGCTCATTATGATGTACAAAATGATGC AGCACTAATGATTGTGCTAGATATGGAGCAACAGGTTTGTTTTGAACGTTTTGATTGGCGGGAGTATAATCAAGCTGCTC TTAGAGAATTTGAAACTAGAGCAATTGTTTGA
Upstream 100 bases:
>100_bases CAACGAGTTGTGAAGTTGATTACTAGCATAGATCAGAACGCAAATAATTATACAGGCTAATCCATTAGGGCTAGAGTACT GTAGTCAAGCACAAGGAGTA
Downstream 100 bases:
>100_bases GCTGGTTTCAGTTAAATAACGAATAGTTGACAAGTTGTTTGTTTACTTGCTAATACAAAAGAGAGTCATAGATCTTTTCA AATTTTTGAGGAAATCTATG
Product: teichoic acid biosynthesis protein
Products: NA
Alternate protein names: CGPTase; Major teichoic acid biosynthesis protein F; Polyglycerol phosphate polymerase [H]
Number of amino acids: Translated: 943; Mature: 943
Protein sequence:
>943_residues MIYIMGKMNTIKLACKFVARPIREFVTKPAIRQINVYLYYVKHSKVQEKAVFLESYHAVNLTGNVYAMYQKMVQEYPDYT YYWAYKDKDTIPADIMADTKRHRVYLVKYESRQYMKALATSKYLINDTSFMPYFIKRDGQRYLNTWHGTPLKTLGLDIKG SGRADHKNIQRNLLAADVLAMPNQFTAEHLITSHDLNGIFPNEVYITGNPRVDNLLGTLVSEDTQALKERLGLPAEKIIL YAPTWKKDVEYTTEADILQLLNEVQRLQERVPSGYKVFLKVHYFIYDKLVEMGYGDQLISNAIDTNTLLRGVDVLITDYS SIFFDFLPIKRPVMFYVPDKDSYAQNRGFYKSLDTLPGLVTDKFDQLLDDCNQKYFDSWAKTYEQQYNDYKSEFLSYDDG QATDRAVQVLFEESSSIERLDFNNNKKKLLIYAGGFYNNGITNSIINLSRNFDTNKYELVFVDYPRMRPEKEYNMNRLPD SVHFIFNFSWATRTFFDTYNQNTSYHFGFNSKLVNQNKMKATYQLNFRRIFGNFMPYEVIDFGGYNKAITGLFALSPVPK KVVFLHNTMWDEYNKIVNGRYKHRKNLRVTFTYYQYFDKIISVSQSADKQNREDLSQYADSAKFTWVENLVNGAEIEKEL SEVKQQVDNGDSLIELTKTETPSGIITTQLFHPVDQNYFNFVTVARLSPEKNHLGLIQAFKLVHDNYPKTRLYIVGNGPI RLEVEQLISGLGLDESVFMMGFLQHPMKFVSFTDYVVLPSVTEGQGLAIIEALLAHKPVVGTDVAGIQDVIKGGRFGLLS GKNAVANPNSLANTLALSIETKDSIKYVKTVKEPLKIFHAETQVDGKWVTSSDDWENPDIVLGNGSNGRAFVEIKHVESY PNYAVFIDGKRAAQNGQLAHYDVQNDAALMIVLDMEQQVCFERFDWREYNQAALREFETRAIV
Sequences:
>Translated_943_residues MIYIMGKMNTIKLACKFVARPIREFVTKPAIRQINVYLYYVKHSKVQEKAVFLESYHAVNLTGNVYAMYQKMVQEYPDYT YYWAYKDKDTIPADIMADTKRHRVYLVKYESRQYMKALATSKYLINDTSFMPYFIKRDGQRYLNTWHGTPLKTLGLDIKG SGRADHKNIQRNLLAADVLAMPNQFTAEHLITSHDLNGIFPNEVYITGNPRVDNLLGTLVSEDTQALKERLGLPAEKIIL YAPTWKKDVEYTTEADILQLLNEVQRLQERVPSGYKVFLKVHYFIYDKLVEMGYGDQLISNAIDTNTLLRGVDVLITDYS SIFFDFLPIKRPVMFYVPDKDSYAQNRGFYKSLDTLPGLVTDKFDQLLDDCNQKYFDSWAKTYEQQYNDYKSEFLSYDDG QATDRAVQVLFEESSSIERLDFNNNKKKLLIYAGGFYNNGITNSIINLSRNFDTNKYELVFVDYPRMRPEKEYNMNRLPD SVHFIFNFSWATRTFFDTYNQNTSYHFGFNSKLVNQNKMKATYQLNFRRIFGNFMPYEVIDFGGYNKAITGLFALSPVPK KVVFLHNTMWDEYNKIVNGRYKHRKNLRVTFTYYQYFDKIISVSQSADKQNREDLSQYADSAKFTWVENLVNGAEIEKEL SEVKQQVDNGDSLIELTKTETPSGIITTQLFHPVDQNYFNFVTVARLSPEKNHLGLIQAFKLVHDNYPKTRLYIVGNGPI RLEVEQLISGLGLDESVFMMGFLQHPMKFVSFTDYVVLPSVTEGQGLAIIEALLAHKPVVGTDVAGIQDVIKGGRFGLLS GKNAVANPNSLANTLALSIETKDSIKYVKTVKEPLKIFHAETQVDGKWVTSSDDWENPDIVLGNGSNGRAFVEIKHVESY PNYAVFIDGKRAAQNGQLAHYDVQNDAALMIVLDMEQQVCFERFDWREYNQAALREFETRAIV >Mature_943_residues MIYIMGKMNTIKLACKFVARPIREFVTKPAIRQINVYLYYVKHSKVQEKAVFLESYHAVNLTGNVYAMYQKMVQEYPDYT YYWAYKDKDTIPADIMADTKRHRVYLVKYESRQYMKALATSKYLINDTSFMPYFIKRDGQRYLNTWHGTPLKTLGLDIKG SGRADHKNIQRNLLAADVLAMPNQFTAEHLITSHDLNGIFPNEVYITGNPRVDNLLGTLVSEDTQALKERLGLPAEKIIL YAPTWKKDVEYTTEADILQLLNEVQRLQERVPSGYKVFLKVHYFIYDKLVEMGYGDQLISNAIDTNTLLRGVDVLITDYS SIFFDFLPIKRPVMFYVPDKDSYAQNRGFYKSLDTLPGLVTDKFDQLLDDCNQKYFDSWAKTYEQQYNDYKSEFLSYDDG QATDRAVQVLFEESSSIERLDFNNNKKKLLIYAGGFYNNGITNSIINLSRNFDTNKYELVFVDYPRMRPEKEYNMNRLPD SVHFIFNFSWATRTFFDTYNQNTSYHFGFNSKLVNQNKMKATYQLNFRRIFGNFMPYEVIDFGGYNKAITGLFALSPVPK KVVFLHNTMWDEYNKIVNGRYKHRKNLRVTFTYYQYFDKIISVSQSADKQNREDLSQYADSAKFTWVENLVNGAEIEKEL SEVKQQVDNGDSLIELTKTETPSGIITTQLFHPVDQNYFNFVTVARLSPEKNHLGLIQAFKLVHDNYPKTRLYIVGNGPI RLEVEQLISGLGLDESVFMMGFLQHPMKFVSFTDYVVLPSVTEGQGLAIIEALLAHKPVVGTDVAGIQDVIKGGRFGLLS GKNAVANPNSLANTLALSIETKDSIKYVKTVKEPLKIFHAETQVDGKWVTSSDDWENPDIVLGNGSNGRAFVEIKHVESY PNYAVFIDGKRAAQNGQLAHYDVQNDAALMIVLDMEQQVCFERFDWREYNQAALREFETRAIV
Specific function: Is responsible for the polymerization of the main chain of the major teichoic acid by sequential transfer of glycerol phosphate units from CDP-glycerol to the dissacharide linkage unit. Synthesizes polymers of approximately 35 glycerol phosphate units in
COG id: COG1887
COG function: function code M; Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-glycerol glycerophosphotransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007554 [H]
Pfam domain/function: PF04464 Glyphos_transf [H]
EC number: =2.7.8.12 [H]
Molecular weight: Translated: 108825; Mature: 108825
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYIMGKMNTIKLACKFVARPIREFVTKPAIRQINVYLYYVKHSKVQEKAVFLESYHAVN CEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCHHHHHHHHHCCEEEE LTGNVYAMYQKMVQEYPDYTYYWAYKDKDTIPADIMADTKRHRVYLVKYESRQYMKALAT ECCCHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHCCCCCCEEEEEEECCHHHHHHHHH SKYLINDTSFMPYFIKRDGQRYLNTWHGTPLKTLGLDIKGSGRADHKNIQRNLLAADVLA CCEEEECCCCCCHHHHCCCHHHHHHCCCCCHHHEEEEECCCCCCCHHHHHHHHHHHHHHH MPNQFTAEHLITSHDLNGIFPNEVYITGNPRVDNLLGTLVSEDTQALKERLGLPAEKIIL CCCCHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHEEE YAPTWKKDVEYTTEADILQLLNEVQRLQERVPSGYKVFLKVHYFIYDKLVEMGYGDQLIS ECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHCCCCHHHHH NAIDTNTLLRGVDVLITDYSSIFFDFLPIKRPVMFYVPDKDSYAQNRGFYKSLDTLPGLV HHCCHHHHHHHHHHEEECHHHHHHHHHCCCCCEEEEECCCCCCHHCCCHHHHHHHCCCHH TDKFDQLLDDCNQKYFDSWAKTYEQQYNDYKSEFLSYDDGQATDRAVQVLFEESSSIERL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEE DFNNNKKKLLIYAGGFYNNGITNSIINLSRNFDTNKYELVFVDYPRMRPEKEYNMNRLPD ECCCCCCEEEEEECCCCCCCCCHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCC SVHFIFNFSWATRTFFDTYNQNTSYHFGFNSKLVNQNKMKATYQLNFRRIFGNFMPYEVI CEEEEEEECHHHHHHHHHCCCCCCEEECCCCCCCCCCCCEEEEEEEHHHHHCCCCCEEEE DFGGYNKAITGLFALSPVPKKVVFLHNTMWDEYNKIVNGRYKHRKNLRVTFTYYQYFDKI ECCCCCHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHCCCHHCCCCCEEEEHHHHHHHHH ISVSQSADKQNREDLSQYADSAKFTWVENLVNGAEIEKELSEVKQQVDNGDSLIELTKTE HHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHCCCCCEEEEECCC TPSGIITTQLFHPVDQNYFNFVTVARLSPEKNHLGLIQAFKLVHDNYPKTRLYIVGNGPI CCCCEEEEHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCE RLEVEQLISGLGLDESVFMMGFLQHPMKFVSFTDYVVLPSVTEGQGLAIIEALLAHKPVV EEEHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHCCCCC GTDVAGIQDVIKGGRFGLLSGKNAVANPNSLANTLALSIETKDSIKYVKTVKEPLKIFHA CCCHHHHHHHHCCCCEEEECCCCCCCCCHHHCCEEEEEEECHHHHHHHHHHHHHHHHHHH ETQVDGKWVTSSDDWENPDIVLGNGSNGRAFVEIKHVESYPNYAVFIDGKRAAQNGQLAH CCCCCCEEECCCCCCCCCCEEEECCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCEEE YDVQNDAALMIVLDMEQQVCFERFDWREYNQAALREFETRAIV EECCCCCEEEEEEECHHHHHHHHCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIYIMGKMNTIKLACKFVARPIREFVTKPAIRQINVYLYYVKHSKVQEKAVFLESYHAVN CEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCHHHHHHHHHCCEEEE LTGNVYAMYQKMVQEYPDYTYYWAYKDKDTIPADIMADTKRHRVYLVKYESRQYMKALAT ECCCHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHCCCCCCEEEEEEECCHHHHHHHHH SKYLINDTSFMPYFIKRDGQRYLNTWHGTPLKTLGLDIKGSGRADHKNIQRNLLAADVLA CCEEEECCCCCCHHHHCCCHHHHHHCCCCCHHHEEEEECCCCCCCHHHHHHHHHHHHHHH MPNQFTAEHLITSHDLNGIFPNEVYITGNPRVDNLLGTLVSEDTQALKERLGLPAEKIIL CCCCHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHEEE YAPTWKKDVEYTTEADILQLLNEVQRLQERVPSGYKVFLKVHYFIYDKLVEMGYGDQLIS ECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHCCCCHHHHH NAIDTNTLLRGVDVLITDYSSIFFDFLPIKRPVMFYVPDKDSYAQNRGFYKSLDTLPGLV HHCCHHHHHHHHHHEEECHHHHHHHHHCCCCCEEEEECCCCCCHHCCCHHHHHHHCCCHH TDKFDQLLDDCNQKYFDSWAKTYEQQYNDYKSEFLSYDDGQATDRAVQVLFEESSSIERL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEE DFNNNKKKLLIYAGGFYNNGITNSIINLSRNFDTNKYELVFVDYPRMRPEKEYNMNRLPD ECCCCCCEEEEEECCCCCCCCCHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCC SVHFIFNFSWATRTFFDTYNQNTSYHFGFNSKLVNQNKMKATYQLNFRRIFGNFMPYEVI CEEEEEEECHHHHHHHHHCCCCCCEEECCCCCCCCCCCCEEEEEEEHHHHHCCCCCEEEE DFGGYNKAITGLFALSPVPKKVVFLHNTMWDEYNKIVNGRYKHRKNLRVTFTYYQYFDKI ECCCCCHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHCCCHHCCCCCEEEEHHHHHHHHH ISVSQSADKQNREDLSQYADSAKFTWVENLVNGAEIEKELSEVKQQVDNGDSLIELTKTE HHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHCCCCCEEEEECCC TPSGIITTQLFHPVDQNYFNFVTVARLSPEKNHLGLIQAFKLVHDNYPKTRLYIVGNGPI CCCCEEEEHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCE RLEVEQLISGLGLDESVFMMGFLQHPMKFVSFTDYVVLPSVTEGQGLAIIEALLAHKPVV EEEHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHCCCCC GTDVAGIQDVIKGGRFGLLSGKNAVANPNSLANTLALSIETKDSIKYVKTVKEPLKIFHA CCCHHHHHHHHCCCCEEEECCCCCCCCCHHHCCEEEEEEECHHHHHHHHHHHHHHHHHHH ETQVDGKWVTSSDDWENPDIVLGNGSNGRAFVEIKHVESYPNYAVFIDGKRAAQNGQLAH CCCCCCEEECCCCCCCCCCEEEECCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCEEE YDVQNDAALMIVLDMEQQVCFERFDWREYNQAALREFETRAIV EECCCCCEEEEEEECHHHHHHHHCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2507871; 9384377; 1309530; 12637499 [H]