Definition Lactobacillus plantarum WCFS1, complete genome.
Accession NC_004567
Length 3,308,274

Click here to switch to the map view.

The map label for this gene is 28377185

Identifier: 28377185

GI number: 28377185

Start: 233445

End: 234233

Strand: Direct

Name: 28377185

Synonym: lp_0259

Alternate gene names: NA

Gene position: 233445-234233 (Clockwise)

Preceding gene: 28377179

Following gene: 28377186

Centisome position: 7.06

GC content: 41.95

Gene sequence:

>789_bases
ATGATTTTGAGTAATTATTTTAAATTCTTATCACACCAACTAAAAGGTTGGCCACAACAGAACTACTATCTATTCTATTT
TAGCCTAGGATGTCAAGTAATGACGTTAGTAAGTGCGCCAATTACAGCATTGTCTATTTTAACATTTATTGGGACCACTT
TGGGTGTTCTTTGTGTGTTAGCCATTAATGCGGCTAAGTCAGTCAATGGATTATTAGGCGTCATCTCCGCCGCTTGCTTC
ATCGTAGTTGGTTTTTCAGCTAAGAACTATTTAAGCATTGGGGAACAATTAGCCTACGTCGTAACGCTTGATATTCCAGT
ACTATTAAGTGCTAATTGGAACGTCAACATGGTTTCAAAGATTCGGAAGTTTACGGGTAAGACGTGGATCGTCGCAATTG
TCGCAACTTTAGTTGTTTATGCCATCTCCGGCTATCTTATTGGTGCCTTAACTGATGATCCCCGGCCATGGGTCGATGCC
ATTAGTTTTGCGATTTGTTTAACGGCCGGCGTTATTTGCTTCCTCCGTTACAACAACCAGTATTTCTGGTGGATTGCCTC
TGGTTTAGCACAAATGGTCCTCTGGTTCATCTCATTCCGTCAAGGTTCGGCGACACTAGCAATGTTCATTAATAGTTCCG
TTTATCTGATGAACGATGTCTTGGCTTTCACTGTTTCACCTTGGTATAACAAACATGAACGCGCTCGGTTGATGGCCGAA
GAACAAGCAGCTAGTGATGCAGCTAGCGCGGATGCTAGTGATAATCAGGCATTTGGATTGAATCACTAA

Upstream 100 bases:

>100_bases
TATTGTGTTGTTTTAATCGGAAACACTACATGTAGTAGTGTGACGTGACTGGTTGGCCAACTAGACACCTACAACCGCAT
ATGAAAACGGAAAGAGGAGC

Downstream 100 bases:

>100_bases
AGGTCAGCTAATAAATTTACTGAGACTAGTAGCGTTAATATTCTAAATAAGGCGAGTACTGTAATTCTTTTGGATTAGAG
TACTCGTCTTTATTTGAATA

Product: integral membrane protein

Products: NA

Alternate protein names: Nicotinamide Mononucleotide; Integral Membrane Protein; Nicotinamide Mononucleotide Transporter PnuC

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MILSNYFKFLSHQLKGWPQQNYYLFYFSLGCQVMTLVSAPITALSILTFIGTTLGVLCVLAINAAKSVNGLLGVISAACF
IVVGFSAKNYLSIGEQLAYVVTLDIPVLLSANWNVNMVSKIRKFTGKTWIVAIVATLVVYAISGYLIGALTDDPRPWVDA
ISFAICLTAGVICFLRYNNQYFWWIASGLAQMVLWFISFRQGSATLAMFINSSVYLMNDVLAFTVSPWYNKHERARLMAE
EQAASDAASADASDNQAFGLNH

Sequences:

>Translated_262_residues
MILSNYFKFLSHQLKGWPQQNYYLFYFSLGCQVMTLVSAPITALSILTFIGTTLGVLCVLAINAAKSVNGLLGVISAACF
IVVGFSAKNYLSIGEQLAYVVTLDIPVLLSANWNVNMVSKIRKFTGKTWIVAIVATLVVYAISGYLIGALTDDPRPWVDA
ISFAICLTAGVICFLRYNNQYFWWIASGLAQMVLWFISFRQGSATLAMFINSSVYLMNDVLAFTVSPWYNKHERARLMAE
EQAASDAASADASDNQAFGLNH
>Mature_262_residues
MILSNYFKFLSHQLKGWPQQNYYLFYFSLGCQVMTLVSAPITALSILTFIGTTLGVLCVLAINAAKSVNGLLGVISAACF
IVVGFSAKNYLSIGEQLAYVVTLDIPVLLSANWNVNMVSKIRKFTGKTWIVAIVATLVVYAISGYLIGALTDDPRPWVDA
ISFAICLTAGVICFLRYNNQYFWWIASGLAQMVLWFISFRQGSATLAMFINSSVYLMNDVLAFTVSPWYNKHERARLMAE
EQAASDAASADASDNQAFGLNH

Specific function: Unknown

COG id: COG3201

COG function: function code H; Nicotinamide mononucleotide transporter

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28869; Mature: 28869

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILSNYFKFLSHQLKGWPQQNYYLFYFSLGCQVMTLVSAPITALSILTFIGTTLGVLCVL
CCHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AINAAKSVNGLLGVISAACFIVVGFSAKNYLSIGEQLAYVVTLDIPVLLSANWNVNMVSK
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEEEEEEEEEEEEEECCCCHHHHHH
IRKFTGKTWIVAIVATLVVYAISGYLIGALTDDPRPWVDAISFAICLTAGVICFLRYNNQ
HHHHCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHEEEEECCE
YFWWIASGLAQMVLWFISFRQGSATLAMFINSSVYLMNDVLAFTVSPWYNKHERARLMAE
EEEEHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHEEECCCCCHHHHHHHHHH
EQAASDAASADASDNQAFGLNH
HHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MILSNYFKFLSHQLKGWPQQNYYLFYFSLGCQVMTLVSAPITALSILTFIGTTLGVLCVL
CCHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AINAAKSVNGLLGVISAACFIVVGFSAKNYLSIGEQLAYVVTLDIPVLLSANWNVNMVSK
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEEEEEEEEEEEEEECCCCHHHHHH
IRKFTGKTWIVAIVATLVVYAISGYLIGALTDDPRPWVDAISFAICLTAGVICFLRYNNQ
HHHHCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHEEEEECCE
YFWWIASGLAQMVLWFISFRQGSATLAMFINSSVYLMNDVLAFTVSPWYNKHERARLMAE
EEEEHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHEEECCCCCHHHHHHHHHH
EQAASDAASADASDNQAFGLNH
HHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA