Definition Lactobacillus plantarum WCFS1, complete genome.
Accession NC_004567
Length 3,308,274

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The map label for this gene is 28377170

Identifier: 28377170

GI number: 28377170

Start: 218478

End: 219824

Strand: Direct

Name: 28377170

Synonym: lp_0243

Alternate gene names: NA

Gene position: 218478-219824 (Clockwise)

Preceding gene: 28377167

Following gene: 28377171

Centisome position: 6.6

GC content: 46.18

Gene sequence:

>1347_bases
ATGCCACCACTTGATTTAACTCATATTCGACAACATCATACGGTTGCTGAATTAATTGCGCTAGGAAAGGCGCGGCGCCA
AGTCACCCCATTTGAAAAATTAGGGACATTTACACCGGTGAAGCGAAACGCCAGTGATTATCTGAAACATGTGCGGGAGA
TGCTGGTACCAGAACTATTACCATTGCGGCGTGAACGAATGTCCGCTTCGGCTTTTGCATTCTTCCGGGGATCAGTTGAG
TTAATGGATTACGATTTGGATTACCAGTCGTCCACTGAAATTCCCGCCGTAGTTTGTGGCGATGCTCATATTGGTAACTT
TGGATTCTATGCGTCACCAGAACGGCGACTGGTATTTGACTTAAATGACTTTGACGAAGCTGGCGTCCATCCGTGGGAAT
GGGATTTACGTCGGTTATTAGTTAGTGTGTTGCTAGCTGCTCGTGATTCTAACTTTAAACCAAAAAAGGTCGAAAAATTG
ATACAGGCGGCGAGTGCGAGTTATCGGGAAGCACTCAAACGGATGTTTGATCAGACGACGTTAGACCGTTTTTATCGCGA
TAACGAAGTTCAGGCTGTCTTGAACTTCGGTGGTGCTCCCGAAGATACGGCCGATTTAATTGCATCCTTGGTTAAAAAGG
CTCAAAAACGTAATTCAGAACAAGTTGTGCGTAAGTTTACGGTCACTAATAGTCGCGGTGAACGGCAATTTAAGGAGAAC
GCGCCCCGTTCTGTCCATATTGATCGGCAAACTTATCAAGGGCTAAAGGCCGGAATTAGCGAGTATTTATTGAACGTACG
GACCGATGTCGCTTTGCTGTTGTCGCAATATGAAGTTACTGATATTATTCGGCATAGTGTGGGCGTCGGGAGTTTTGGGT
CACTATGTTACTTGGTTCTTCTGACGAGTACGGATGGTAGCCATATGGTGTTACAAATCAAGGAAGCTTTACCAACGCGG
AAAGTCGGGAGCCAGTCGCGGCCAGCGTTAACGGCCGCCATGGAATTGACGGAAGGGCAACGGATCGTCAGTTCGCAACG
CATTTTACAAGCAACCTCGGATGCGTTCCTGGGCTATTTCCAAATGGAAAATAAGAGTTTTTATGTCCGTCAATTTCGGG
ATATGAAGGAATCCATCGATATTCCAACCCTAGACTGGGGTCAATTCCAAGCCTATGCAAATACGTGCGCAATGATTTTG
GCAAAGGCTCATGCGCAAAGTCCAACGGCGGCCATGATTCGGGGATACGTTGGTAATTCGGCGAAGTTTGATGAAGCCAT
GGCTAAATGGGCCACGGCGTATGTTGAACAAGTTGATAATGATTATCAAGATTTCTTAGATGTTTGA

Upstream 100 bases:

>100_bases
ATTGGGACGCGAGAAGCGGGCTCAACTAGCTGAATTATTTTCTATCGTTGGAAGATATCGCTATAATAAAATTAGTAAAT
CATAAAAGGATTTGATACTC

Downstream 100 bases:

>100_bases
TGGTTTAAACGAAGAGTTGATCAAATATCGCGCTGAAACGCGTGACGATTAGACGTGTATTGAAAATAAAGAAAGGGTCA
TCGGAATCATTGATACTCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 448; Mature: 447

Protein sequence:

>448_residues
MPPLDLTHIRQHHTVAELIALGKARRQVTPFEKLGTFTPVKRNASDYLKHVREMLVPELLPLRRERMSASAFAFFRGSVE
LMDYDLDYQSSTEIPAVVCGDAHIGNFGFYASPERRLVFDLNDFDEAGVHPWEWDLRRLLVSVLLAARDSNFKPKKVEKL
IQAASASYREALKRMFDQTTLDRFYRDNEVQAVLNFGGAPEDTADLIASLVKKAQKRNSEQVVRKFTVTNSRGERQFKEN
APRSVHIDRQTYQGLKAGISEYLLNVRTDVALLLSQYEVTDIIRHSVGVGSFGSLCYLVLLTSTDGSHMVLQIKEALPTR
KVGSQSRPALTAAMELTEGQRIVSSQRILQATSDAFLGYFQMENKSFYVRQFRDMKESIDIPTLDWGQFQAYANTCAMIL
AKAHAQSPTAAMIRGYVGNSAKFDEAMAKWATAYVEQVDNDYQDFLDV

Sequences:

>Translated_448_residues
MPPLDLTHIRQHHTVAELIALGKARRQVTPFEKLGTFTPVKRNASDYLKHVREMLVPELLPLRRERMSASAFAFFRGSVE
LMDYDLDYQSSTEIPAVVCGDAHIGNFGFYASPERRLVFDLNDFDEAGVHPWEWDLRRLLVSVLLAARDSNFKPKKVEKL
IQAASASYREALKRMFDQTTLDRFYRDNEVQAVLNFGGAPEDTADLIASLVKKAQKRNSEQVVRKFTVTNSRGERQFKEN
APRSVHIDRQTYQGLKAGISEYLLNVRTDVALLLSQYEVTDIIRHSVGVGSFGSLCYLVLLTSTDGSHMVLQIKEALPTR
KVGSQSRPALTAAMELTEGQRIVSSQRILQATSDAFLGYFQMENKSFYVRQFRDMKESIDIPTLDWGQFQAYANTCAMIL
AKAHAQSPTAAMIRGYVGNSAKFDEAMAKWATAYVEQVDNDYQDFLDV
>Mature_447_residues
PPLDLTHIRQHHTVAELIALGKARRQVTPFEKLGTFTPVKRNASDYLKHVREMLVPELLPLRRERMSASAFAFFRGSVEL
MDYDLDYQSSTEIPAVVCGDAHIGNFGFYASPERRLVFDLNDFDEAGVHPWEWDLRRLLVSVLLAARDSNFKPKKVEKLI
QAASASYREALKRMFDQTTLDRFYRDNEVQAVLNFGGAPEDTADLIASLVKKAQKRNSEQVVRKFTVTNSRGERQFKENA
PRSVHIDRQTYQGLKAGISEYLLNVRTDVALLLSQYEVTDIIRHSVGVGSFGSLCYLVLLTSTDGSHMVLQIKEALPTRK
VGSQSRPALTAAMELTEGQRIVSSQRILQATSDAFLGYFQMENKSFYVRQFRDMKESIDIPTLDWGQFQAYANTCAMILA
KAHAQSPTAAMIRGYVGNSAKFDEAMAKWATAYVEQVDNDYQDFLDV

Specific function: Unknown

COG id: COG4320

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50691; Mature: 50560

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPLDLTHIRQHHTVAELIALGKARRQVTPFEKLGTFTPVKRNASDYLKHVREMLVPELL
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
PLRRERMSASAFAFFRGSVELMDYDLDYQSSTEIPAVVCGDAHIGNFGFYASPERRLVFD
HHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEECCCEECCCCCCCCCCCCEEEE
LNDFDEAGVHPWEWDLRRLLVSVLLAARDSNFKPKKVEKLIQAASASYREALKRMFDQTT
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDRFYRDNEVQAVLNFGGAPEDTADLIASLVKKAQKRNSEQVVRKFTVTNSRGERQFKEN
HHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHC
APRSVHIDRQTYQGLKAGISEYLLNVRTDVALLLSQYEVTDIIRHSVGVGSFGSLCYLVL
CCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEHE
LTSTDGSHMVLQIKEALPTRKVGSQSRPALTAAMELTEGQRIVSSQRILQATSDAFLGYF
EECCCCCEEEEEEHHHCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEE
QMENKSFYVRQFRDMKESIDIPTLDWGQFQAYANTCAMILAKAHAQSPTAAMIRGYVGNS
EECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC
AKFDEAMAKWATAYVEQVDNDYQDFLDV
CHHHHHHHHHHHHHHHHHCCHHHHHHCC
>Mature Secondary Structure 
PPLDLTHIRQHHTVAELIALGKARRQVTPFEKLGTFTPVKRNASDYLKHVREMLVPELL
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
PLRRERMSASAFAFFRGSVELMDYDLDYQSSTEIPAVVCGDAHIGNFGFYASPERRLVFD
HHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEECCCEECCCCCCCCCCCCEEEE
LNDFDEAGVHPWEWDLRRLLVSVLLAARDSNFKPKKVEKLIQAASASYREALKRMFDQTT
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDRFYRDNEVQAVLNFGGAPEDTADLIASLVKKAQKRNSEQVVRKFTVTNSRGERQFKEN
HHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHC
APRSVHIDRQTYQGLKAGISEYLLNVRTDVALLLSQYEVTDIIRHSVGVGSFGSLCYLVL
CCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEHE
LTSTDGSHMVLQIKEALPTRKVGSQSRPALTAAMELTEGQRIVSSQRILQATSDAFLGYF
EECCCCCEEEEEEHHHCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEE
QMENKSFYVRQFRDMKESIDIPTLDWGQFQAYANTCAMILAKAHAQSPTAAMIRGYVGNS
EECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC
AKFDEAMAKWATAYVEQVDNDYQDFLDV
CHHHHHHHHHHHHHHHHHCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA