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The map label for this gene is deoD [C]

Identifier: 28377073

GI number: 28377073

Start: 112589

End: 113347

Strand: Direct

Name: deoD [C]

Synonym: lp_0125

Alternate gene names: 28377073

Gene position: 112589-113347 (Clockwise)

Preceding gene: 28377071

Following gene: 28377076

Centisome position: 3.4

GC content: 46.25

Gene sequence:

>759_bases
ATGACAGATAAGTTAACGTTATTGCAATATGATCCAAATCCAACGGCTATGGTAGGGCCAGACGTGGATGGCCGCTTTAC
TGTTCCAGCTAAGCTACTCTACATATTTTCTGGTGATGATTATTTTCAACAATTCGTCACTCGGTATCATGGTCACCGTT
TAGGCCAATTTAATACAATTACTAAAGTTAGCTGGGTTTATCAAATCGGTTATCGTGGTCAAAAATTGGCAGTAGCGCAA
GCGCCCCTTGGTTCCCCAGCTGCGACAATGTATTTAGAGATGTTGATTGATTTTGGTGCTCGTACCGTCATAGCAGTTGG
TAGTTGCGGCGCATTAACAGCACTACCAGAGGAACAATTATTAATCCCAACGGTGGCTTTGCGTGATGAAGGGACGTCCT
TTCATTATTTAGCAGCAGCTGATTGGGTGCCACTCGATCCAAAGGTTATACAGGTACTCGGGACAACATTGACGAAGGCT
TGCCTGCCATGGCAGATGGTCAAAACGTGGACAACGGATGCTTTCTTCCGTGAGACTGTGTCTAAAGTCAAAGCTGCTCG
TCAGCAGGGTTGTCAAGTCGTAGAAATGGAATGTTCGGCCTTAGCTGCCTGTTCGGCGTTTCGGCAAGTTTCCTTTGGAC
AATTACTATATACGGCAGATACCTTAGCACAACTAGAGCACTATGATCCGCGACATTGGGGTGCGGGCGGTGTTCTTGCT
GCCATTGAACTAGCTGTGGAAAGTTTGGCCGCATATTAG

Upstream 100 bases:

>100_bases
TGCGTTAGTTGCAATAATATATCAGATTTTGGCTAGTTTGTCGCTGAAAATGACTGGTTTTCCTCGAATTGTTGGGTAAA
TTAAATAGGGAGAACTTAAG

Downstream 100 bases:

>100_bases
CGAATAAAAAACGAGCAGTCGATGACTGTTCGTTAATAGTGGCTAATCCTTGATGGGGTCCTTCATTAATAACCAGAGAA
TCAGGTAAGCGATGATACCA

Product: purine nucleoside phosphorylase (putative)

Products: alpha-D-Ribose 1-phosphate; Xanthine [C]

Alternate protein names: Uridine Phosphorylase; Phosphorylase Pnp/Udp Family Protein; Phosphorylase Pnp/Udp Family; Purine Nucleoside Phosphorylase; Purine-Nucleoside Phosphorylase; Phosphorylase Family Protein; Pnp/Udp Family Phosphorylase; Purine Or Other Phosphorylase Family 1 Protein; Purine Phosphorylases Family

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MTDKLTLLQYDPNPTAMVGPDVDGRFTVPAKLLYIFSGDDYFQQFVTRYHGHRLGQFNTITKVSWVYQIGYRGQKLAVAQ
APLGSPAATMYLEMLIDFGARTVIAVGSCGALTALPEEQLLIPTVALRDEGTSFHYLAAADWVPLDPKVIQVLGTTLTKA
CLPWQMVKTWTTDAFFRETVSKVKAARQQGCQVVEMECSALAACSAFRQVSFGQLLYTADTLAQLEHYDPRHWGAGGVLA
AIELAVESLAAY

Sequences:

>Translated_252_residues
MTDKLTLLQYDPNPTAMVGPDVDGRFTVPAKLLYIFSGDDYFQQFVTRYHGHRLGQFNTITKVSWVYQIGYRGQKLAVAQ
APLGSPAATMYLEMLIDFGARTVIAVGSCGALTALPEEQLLIPTVALRDEGTSFHYLAAADWVPLDPKVIQVLGTTLTKA
CLPWQMVKTWTTDAFFRETVSKVKAARQQGCQVVEMECSALAACSAFRQVSFGQLLYTADTLAQLEHYDPRHWGAGGVLA
AIELAVESLAAY
>Mature_251_residues
TDKLTLLQYDPNPTAMVGPDVDGRFTVPAKLLYIFSGDDYFQQFVTRYHGHRLGQFNTITKVSWVYQIGYRGQKLAVAQA
PLGSPAATMYLEMLIDFGARTVIAVGSCGALTALPEEQLLIPTVALRDEGTSFHYLAAADWVPLDPKVIQVLGTTLTKAC
LPWQMVKTWTTDAFFRETVSKVKAARQQGCQVVEMECSALAACSAFRQVSFGQLLYTADTLAQLEHYDPRHWGAGGVLAA
IELAVESLAAY

Specific function: Cleavage Of Guanosine Or Inosine To Respective Bases And Sugar-1-Phosphate Molecules. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.4.2.1 [C]

Molecular weight: Translated: 27678; Mature: 27547

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDKLTLLQYDPNPTAMVGPDVDGRFTVPAKLLYIFSGDDYFQQFVTRYHGHRLGQFNTI
CCCCEEEEEECCCCCEEECCCCCCEEECCEEEEEEECCCHHHHHHHHHHCCCCCCCCCHH
TKVSWVYQIGYRGQKLAVAQAPLGSPAATMYLEMLIDFGARTVIAVGSCGALTALPEEQL
HHEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCE
LIPTVALRDEGTSFHYLAAADWVPLDPKVIQVLGTTLTKACLPWQMVKTWTTDAFFRETV
EEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
SKVKAARQQGCQVVEMECSALAACSAFRQVSFGQLLYTADTLAQLEHYDPRHWGAGGVLA
HHHHHHHHHCCEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
AIELAVESLAAY
HHHHHHHHHHCC
>Mature Secondary Structure 
TDKLTLLQYDPNPTAMVGPDVDGRFTVPAKLLYIFSGDDYFQQFVTRYHGHRLGQFNTI
CCCEEEEEECCCCCEEECCCCCCEEECCEEEEEEECCCHHHHHHHHHHCCCCCCCCCHH
TKVSWVYQIGYRGQKLAVAQAPLGSPAATMYLEMLIDFGARTVIAVGSCGALTALPEEQL
HHEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCE
LIPTVALRDEGTSFHYLAAADWVPLDPKVIQVLGTTLTKACLPWQMVKTWTTDAFFRETV
EEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
SKVKAARQQGCQVVEMECSALAACSAFRQVSFGQLLYTADTLAQLEHYDPRHWGAGGVLA
HHHHHHHHHCCEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
AIELAVESLAAY
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): 3.9 {phosphate}} 0.2 {inosine}} [C]

Substrates: Phosphate; Xanthosine [C]

Specific reaction: Phosphate + Xanthosine <==> alpha-D-Ribose 1-phosphate + Xanthine [C]

General reaction: Pentosyl group transfer [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA