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The map label for this gene is ssb

Identifier: 28376982

GI number: 28376982

Start: 10196

End: 10798

Strand: Direct

Name: ssb

Synonym: lp_0010

Alternate gene names: 28376982

Gene position: 10196-10798 (Clockwise)

Preceding gene: 28376981

Following gene: 28376983

Centisome position: 0.31

GC content: 41.96

Gene sequence:

>603_bases
ATGATTAACCGTACAATTCTTGTTGGCCGACTGACAAGAGATCCGGAATTACGTTACACGAATGGTGGTGCCGCCGTCGC
GACGTTCACTATTGCCGTAAACCGTCAATTCACGAATCAAAATGGGGAACGTGAAGCAGATTTCATTAGTTGCGTCATTT
GGCGTAAAGCTGCTGAAAATTTTGCGAACTTTACTCATAAAGGTTCACTTGTTGGTATCGATGGCCGGATTCAAACCCGG
AACTACGAAAACCAACAAGGGGTACGTGTTTACGTTACAGAAGTTGTCGTTGAAAACTTCTCATTATTAGAATCACGGGC
AGAGTCTGAACGTCATCAGGCTGCCAATGGTGGTAGTGGTAATAACAATTACAACAATGGTAATTCGAATTACAACAACA
ATAATAATGGGTATAGTAATCAAGGCCAAAATGCGGCTCCTCAACAATCATCAGCGAATAACAATAACCCATTTGGTAAT
GGTAATACTGGTAATGCTAGCAGTGCGGCACCATCAAGCAGTGCTAACAACAATAATCAGGCTGACCCATTCGCTAATAA
TGGCGATCAAATTGATATCTCGGATGATGATTTACCATTCTAG

Upstream 100 bases:

>100_bases
CGACCGTCTTTCAAAGATCAATGATGACATTTTACGTCACATGATCGTTAAACGCGAAGACTAATAGACAAAATTAATTT
TAAGAGAGGAGCGCTTCTGC

Downstream 100 bases:

>100_bases
TCTAATTGCTTAGACAGATAACGAGGAGGGAAATATCAATGGCACAACAAAGAAGAGGTGGCCGTCGTCGTCGTAAAGTC
GACTTCATCGCCGCAAACCA

Product: single-strand binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MINRTILVGRLTRDPELRYTNGGAAVATFTIAVNRQFTNQNGEREADFISCVIWRKAAENFANFTHKGSLVGIDGRIQTR
NYENQQGVRVYVTEVVVENFSLLESRAESERHQAANGGSGNNNYNNGNSNYNNNNNGYSNQGQNAAPQQSSANNNNPFGN
GNTGNASSAAPSSSANNNNQADPFANNGDQIDISDDDLPF

Sequences:

>Translated_200_residues
MINRTILVGRLTRDPELRYTNGGAAVATFTIAVNRQFTNQNGEREADFISCVIWRKAAENFANFTHKGSLVGIDGRIQTR
NYENQQGVRVYVTEVVVENFSLLESRAESERHQAANGGSGNNNYNNGNSNYNNNNNGYSNQGQNAAPQQSSANNNNPFGN
GNTGNASSAAPSSSANNNNQADPFANNGDQIDISDDDLPF
>Mature_200_residues
MINRTILVGRLTRDPELRYTNGGAAVATFTIAVNRQFTNQNGEREADFISCVIWRKAAENFANFTHKGSLVGIDGRIQTR
NYENQQGVRVYVTEVVVENFSLLESRAESERHQAANGGSGNNNYNNGNSNYNNNNNGYSNQGQNAAPQQSSANNNNPFGN
GNTGNASSAAPSSSANNNNQADPFANNGDQIDISDDDLPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain

Homologues:

Organism=Escherichia coli, GI1790494, Length=99, Percent_Identity=39.3939393939394, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): SSB_LACPL (Q890K1)

Other databases:

- EMBL:   AL935252
- RefSeq:   NP_783874.1
- ProteinModelPortal:   Q890K1
- SMR:   Q890K1
- GeneID:   1061124
- GenomeReviews:   AL935263_GR
- KEGG:   lpl:lp_0010
- NMPDR:   fig|220668.1.peg.8
- HOGENOM:   HBG755544
- OMA:   INRTILV
- ProtClustDB:   CLSK580946
- BioCyc:   LPLA220668:LP_0010-MONOMER
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344
- Gene3D:   G3DSA:2.40.50.140
- PANTHER:   PTHR10302
- TIGRFAMs:   TIGR00621

Pfam domain/function: PF00436 SSB; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 21684; Mature: 21684

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINRTILVGRLTRDPELRYTNGGAAVATFTIAVNRQFTNQNGEREADFISCVIWRKAAEN
CCCCEEEEEECCCCCCEEEECCCCEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHH
FANFTHKGSLVGIDGRIQTRNYENQQGVRVYVTEVVVENFSLLESRAESERHQAANGGSG
HHHHCCCCCEEEECCEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCC
NNNYNNGNSNYNNNNNGYSNQGQNAAPQQSSANNNNPFGNGNTGNASSAAPSSSANNNNQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ADPFANNGDQIDISDDDLPF
CCCCCCCCCEEEECCCCCCC
>Mature Secondary Structure
MINRTILVGRLTRDPELRYTNGGAAVATFTIAVNRQFTNQNGEREADFISCVIWRKAAEN
CCCCEEEEEECCCCCCEEEECCCCEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHH
FANFTHKGSLVGIDGRIQTRNYENQQGVRVYVTEVVVENFSLLESRAESERHQAANGGSG
HHHHCCCCCEEEECCEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCC
NNNYNNGNSNYNNNNNGYSNQGQNAAPQQSSANNNNPFGNGNTGNASSAAPSSSANNNNQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ADPFANNGDQIDISDDDLPF
CCCCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12566566