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The map label for this gene is yaaA [H]

Identifier: 28376977

GI number: 28376977

Start: 3210

End: 3443

Strand: Direct

Name: yaaA [H]

Synonym: lp_0004

Alternate gene names: 28376977

Gene position: 3210-3443 (Clockwise)

Preceding gene: 28376976

Following gene: 28376978

Centisome position: 0.1

GC content: 42.74

Gene sequence:

>234_bases
GTGAAACAGCCAATAGATATTAAAACCCCATATATGACGTTGGGGCAACTCTTAAAAGAAACGGCCATCATTGGATCGGG
TGGTCAGGCGAAGTGGTTCTTAAAAGAAACAACCGTGTTAGTTAATGGTGAACCAGATGATCGGCGGGGTCGGAAACTTT
ATCCAGGCGATACGATTGAAGTTGAAGACAACGGGTCATTTTTTATTCGCTCAAATCAAGAAACGACTGATTAG

Upstream 100 bases:

>100_bases
AATTTTCATCAAAAAACAAGTATAATATAACCTGTTAGGAGTGTGTGTAGCACGCCAGACAGTCGTTTAATAGCTTGTAA
TCAGATAGGCAGGTGACATT

Downstream 100 bases:

>100_bases
ATGTACTTAGAAAACTTAGTCTTGCATGATTTTCGGAACTACGCGGATTTGACCATTAATTTTAGTCAGGGCGTTAATGT
TCTATTAGGTGAAAATGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 77; Mature: 77

Protein sequence:

>77_residues
MKQPIDIKTPYMTLGQLLKETAIIGSGGQAKWFLKETTVLVNGEPDDRRGRKLYPGDTIEVEDNGSFFIRSNQETTD

Sequences:

>Translated_77_residues
MKQPIDIKTPYMTLGQLLKETAIIGSGGQAKWFLKETTVLVNGEPDDRRGRKLYPGDTIEVEDNGSFFIRSNQETTD
>Mature_77_residues
MKQPIDIKTPYMTLGQLLKETAIIGSGGQAKWFLKETTVLVNGEPDDRRGRKLYPGDTIEVEDNGSFFIRSNQETTD

Specific function: Unknown

COG id: COG2501

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014330
- InterPro:   IPR002942 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8661; Mature: 8661

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQPIDIKTPYMTLGQLLKETAIIGSGGQAKWFLKETTVLVNGEPDDRRGRKLYPGDTIE
CCCCCCCCCCHHHHHHHHHHHEEECCCCCEEEEEEEEEEEEECCCCCCCCCEECCCCEEE
VEDNGSFFIRSNQETTD
EECCCCEEEECCCCCCC
>Mature Secondary Structure
MKQPIDIKTPYMTLGQLLKETAIIGSGGQAKWFLKETTVLVNGEPDDRRGRKLYPGDTIE
CCCCCCCCCCHHHHHHHHHHHEEECCCCCEEEEEEEEEEEEECCCCCCCCCEECCCCEEE
VEDNGSFFIRSNQETTD
EECCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2987847; 7584024; 9384377 [H]