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The map label for this gene is rbr [H]

Identifier: 28212206

GI number: 28212206

Start: 2785527

End: 2786114

Strand: Direct

Name: rbr [H]

Synonym: CTC02638

Alternate gene names: 28212206

Gene position: 2785527-2786114 (Clockwise)

Preceding gene: 28212197

Following gene: NA

Centisome position: 99.51

GC content: 31.97

Gene sequence:

>588_bases
ATGAAATCTTTAAAAGGAACAAAAACTGCTGAAAATTTATTGAAAGCTTTTGCCGGTGAATCTCAAGCTAGAAACAGATA
TACTTATTATGCGTCTATTGCTAGAAAAGAAGGCTATGTTCAAATATCTAATATATTTCAAGAAACTGCTGATAATGAAA
AAGAACACGCTAAAAGATTTTTTAAATTTTTAAATGAAGACTTACAAGGAGAAGCTGTAGAAATTACTAGTGCAAGCTAT
CCTGTGGGATTAGGTAATACTAAAGATAATTTGAAATATGCAGCCGATGGTGAAAATGAAGAATGGAGTGAACTATATCC
TGAATTTGCAAGAGTTGCTGATGAGGAAGGTTTTCCAACTATAGCAACAGTATTTAGAAAAATTGCTGAAGTTGAAGTTC
ATCATGAAAAAAGATATAGAAAATTATTAGAAAATATAAATACTGATAAAGTATTTAAAAAAGACGAGCCAACTCTATGG
AAGTGCTTAAACTGTGGATATATTCACGAAGGACAAGCCGCTCCTGATATTTGCCCAGCCTGTGCTCATCCAATAGGTCA
CTTTGAATTGTTAGCTGATAATTTTTAA

Upstream 100 bases:

>100_bases
AATTTATGCATAAAATTATTTGATAATATACAGAATAGTGTTATAATTTATATGTATAACACTTTTATAAACATAATTAA
TTATAGGAGGTCATTATATA

Downstream 100 bases:

>100_bases
TAGCCATATATAAAAGATACTCAGTATTATCCTGAGTATCTTTTATATATATTTACTTATACTGTTTCTTTTTCTTGTTT
TTTCTTTTCTATGATTTTTG

Product: rubrerythrin

Products: NA

Alternate protein names: RR [H]

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MKSLKGTKTAENLLKAFAGESQARNRYTYYASIARKEGYVQISNIFQETADNEKEHAKRFFKFLNEDLQGEAVEITSASY
PVGLGNTKDNLKYAADGENEEWSELYPEFARVADEEGFPTIATVFRKIAEVEVHHEKRYRKLLENINTDKVFKKDEPTLW
KCLNCGYIHEGQAAPDICPACAHPIGHFELLADNF

Sequences:

>Translated_195_residues
MKSLKGTKTAENLLKAFAGESQARNRYTYYASIARKEGYVQISNIFQETADNEKEHAKRFFKFLNEDLQGEAVEITSASY
PVGLGNTKDNLKYAADGENEEWSELYPEFARVADEEGFPTIATVFRKIAEVEVHHEKRYRKLLENINTDKVFKKDEPTLW
KCLNCGYIHEGQAAPDICPACAHPIGHFELLADNF
>Mature_195_residues
MKSLKGTKTAENLLKAFAGESQARNRYTYYASIARKEGYVQISNIFQETADNEKEHAKRFFKFLNEDLQGEAVEITSASY
PVGLGNTKDNLKYAADGENEEWSELYPEFARVADEEGFPTIATVFRKIAEVEVHHEKRYRKLLENINTDKVFKKDEPTLW
KCLNCGYIHEGQAAPDICPACAHPIGHFELLADNF

Specific function: May provide oxidative stress protection via catalytic reduction of intracellular hydrogen peroxide [H]

COG id: COG1592

COG function: function code C; Rubrerythrin

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rubredoxin-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009040
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR004039
- InterPro:   IPR003251 [H]

Pfam domain/function: PF02915 Rubrerythrin [H]

EC number: NA

Molecular weight: Translated: 22218; Mature: 22218

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: PS50903 RUBREDOXIN_LIKE ; PS50905 FERRITIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLKGTKTAENLLKAFAGESQARNRYTYYASIARKEGYVQISNIFQETADNEKEHAKRF
CCCCCCCHHHHHHHHHHHCCHHHCCCHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHH
FKFLNEDLQGEAVEITSASYPVGLGNTKDNLKYAADGENEEWSELYPEFARVADEEGFPT
HHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCCCCH
IATVFRKIAEVEVHHEKRYRKLLENINTDKVFKKDEPTLWKCLNCGYIHEGQAAPDICPA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHH
CAHPIGHFELLADNF
HCCCCCHHHHHCCCC
>Mature Secondary Structure
MKSLKGTKTAENLLKAFAGESQARNRYTYYASIARKEGYVQISNIFQETADNEKEHAKRF
CCCCCCCHHHHHHHHHHHCCHHHCCCHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHH
FKFLNEDLQGEAVEITSASYPVGLGNTKDNLKYAADGENEEWSELYPEFARVADEEGFPT
HHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCCCCH
IATVFRKIAEVEVHHEKRYRKLLENINTDKVFKKDEPTLWKCLNCGYIHEGQAAPDICPA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHH
CAHPIGHFELLADNF
HCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8955396; 11792842 [H]