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The map label for this gene is 28212001

Identifier: 28212001

GI number: 28212001

Start: 2554683

End: 2555321

Strand: Direct

Name: 28212001

Synonym: CTC02414

Alternate gene names: NA

Gene position: 2554683-2555321 (Clockwise)

Preceding gene: 28211981

Following gene: 28212014

Centisome position: 91.26

GC content: 19.25

Gene sequence:

>639_bases
ATGAATAATTTAAAGACACTTAAAGAAATTTTATTTTCTTTTATTCTATCTTTATTTTTTATTTTATTATCTATAGAAAT
AGTAGTAAATTTTAAATACTTATATTATTTGGACATAAAATTTTTAAACTTAGAACATGCAAGTAATCTTTCATATTATG
AAATAAAGCTAAACTATGATTATCTTATAGATTTTATTACATCTGCTGAAAATATAGATTTTAATATACCCTCTTTTCCT
TCATCTACAGAAGGTATACTGCACTTTTATGAAGTAAGGGATATATTTACTAATATAAAATTGTTGTTTTATATAACTGC
AATTATATCCACTTTTATTGCCTATTATTCCTTTAAAAATACTAATTTTCATATATTTTATTACAGTTCTCATATACTAT
TGACTATACCATTGCTTCTTATTACCACATTTGTATTAAATTTTAATAAAGTTTTTACTTATTTTCATAAGATATTTTTT
AATAATGATTTCTGGATTTTTGATATTAATAAAGATCCAATTATTAATATATTACCTGAAGAATTTTTTCTTCATATGGC
TATATTTATAAATATAATGGTTATAATTTTTGCTATAACTTGTAGAAAAATATATAAAAAAAGCTCTAGTCTTATATAA

Upstream 100 bases:

>100_bases
TATTTTATTTATTTTACAAAATATATACATTTACAAAGCTTATTAACATACCCTATACTTTAATGTAACAAATATTTATT
TAATTTTAGAGGTATTAATT

Downstream 100 bases:

>100_bases
AACCTAGAACTTTTTTTTATTTTTCTCGCATTCTTTATTTAGATTATTGATTATACTTCTTCCCTTTACCACTCCTATTA
TAATAAGTATAACTGTTACT

Product: membrane spanning protein

Products: NA

Alternate protein names: Integral Membrane Protein; Membrane Spanning Protein

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MNNLKTLKEILFSFILSLFFILLSIEIVVNFKYLYYLDIKFLNLEHASNLSYYEIKLNYDYLIDFITSAENIDFNIPSFP
SSTEGILHFYEVRDIFTNIKLLFYITAIISTFIAYYSFKNTNFHIFYYSSHILLTIPLLLITTFVLNFNKVFTYFHKIFF
NNDFWIFDINKDPIINILPEEFFLHMAIFINIMVIIFAITCRKIYKKSSSLI

Sequences:

>Translated_212_residues
MNNLKTLKEILFSFILSLFFILLSIEIVVNFKYLYYLDIKFLNLEHASNLSYYEIKLNYDYLIDFITSAENIDFNIPSFP
SSTEGILHFYEVRDIFTNIKLLFYITAIISTFIAYYSFKNTNFHIFYYSSHILLTIPLLLITTFVLNFNKVFTYFHKIFF
NNDFWIFDINKDPIINILPEEFFLHMAIFINIMVIIFAITCRKIYKKSSSLI
>Mature_212_residues
MNNLKTLKEILFSFILSLFFILLSIEIVVNFKYLYYLDIKFLNLEHASNLSYYEIKLNYDYLIDFITSAENIDFNIPSFP
SSTEGILHFYEVRDIFTNIKLLFYITAIISTFIAYYSFKNTNFHIFYYSSHILLTIPLLLITTFVLNFNKVFTYFHKIFF
NNDFWIFDINKDPIINILPEEFFLHMAIFINIMVIIFAITCRKIYKKSSSLI

Specific function: Unknown

COG id: COG4478

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25394; Mature: 25394

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNLKTLKEILFSFILSLFFILLSIEIVVNFKYLYYLDIKFLNLEHASNLSYYEIKLNYD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEEEEEECCCCCEEEEEEECHH
YLIDFITSAENIDFNIPSFPSSTEGILHFYEVRDIFTNIKLLFYITAIISTFIAYYSFKN
HHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC
TNFHIFYYSSHILLTIPLLLITTFVLNFNKVFTYFHKIFFNNDFWIFDINKDPIINILPE
CCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEECHH
EFFLHMAIFINIMVIIFAITCRKIYKKSSSLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNNLKTLKEILFSFILSLFFILLSIEIVVNFKYLYYLDIKFLNLEHASNLSYYEIKLNYD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEEEEEECCCCCEEEEEEECHH
YLIDFITSAENIDFNIPSFPSSTEGILHFYEVRDIFTNIKLLFYITAIISTFIAYYSFKN
HHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC
TNFHIFYYSSHILLTIPLLLITTFVLNFNKVFTYFHKIFFNNDFWIFDINKDPIINILPE
CCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEECHH
EFFLHMAIFINIMVIIFAITCRKIYKKSSSLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA