| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28211977
Identifier: 28211977
GI number: 28211977
Start: 2522365
End: 2522673
Strand: Direct
Name: 28211977
Synonym: CTC02385
Alternate gene names: NA
Gene position: 2522365-2522673 (Clockwise)
Preceding gene: 28211963
Following gene: 28211981
Centisome position: 90.11
GC content: 28.48
Gene sequence:
>309_bases TTGTTATGGCATAGATTTGAGTATTTTGTAGGATCTTTTGAAATGTTTTCCCCTAAATTTAAAATTTCACTTATTTCCTC TATAGTAAAATCCATTGGGTCAATTAAACTTCTTCCTTTTAACATGTTATTATTCCTCCTTTTTAGTATCTCTGTACTAA GTTTAAAGGTATTAAAAAATGCCTTCCCTAAAGGAAGGCATAGAAGTCCTAATGTACAGTATTCCTATAACACTTCCTTT AAAGTCTCTCTGGACTTTTTTAAAGGCTTTATTTTCTCTTATACGATACTATCACTATATATATTATAA
Upstream 100 bases:
>100_bases TTCTGAAAAACCTATTATTTGACCACCTAATCTAAGCATTGCTGCTTCAAAGCTAAACCTAGTCCTTGTACTTGGTTCAT AAAATAATGTAGCCAAAATT
Downstream 100 bases:
>100_bases GTCAATAGCTTTATTACTATATTTTTACTTAAAAACAACTTTATTGTCCTCAAATCCTTTTATAATTGCTAAGGATTCTA ACTGTATTCCCTTATTTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 102; Mature: 102
Protein sequence:
>102_residues MLWHRFEYFVGSFEMFSPKFKISLISSIVKSIGSIKLLPFNMLLFLLFSISVLSLKVLKNAFPKGRHRSPNVQYSYNTSF KVSLDFFKGFIFSYTILSLYIL
Sequences:
>Translated_102_residues MLWHRFEYFVGSFEMFSPKFKISLISSIVKSIGSIKLLPFNMLLFLLFSISVLSLKVLKNAFPKGRHRSPNVQYSYNTSF KVSLDFFKGFIFSYTILSLYIL >Mature_102_residues MLWHRFEYFVGSFEMFSPKFKISLISSIVKSIGSIKLLPFNMLLFLLFSISVLSLKVLKNAFPKGRHRSPNVQYSYNTSF KVSLDFFKGFIFSYTILSLYIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11922; Mature: 11922
Theoretical pI: Translated: 10.70; Mature: 10.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLWHRFEYFVGSFEMFSPKFKISLISSIVKSIGSIKLLPFNMLLFLLFSISVLSLKVLKN CCCHHHHHHHCCHHHCCCCHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHH AFPKGRHRSPNVQYSYNTSFKVSLDFFKGFIFSYTILSLYIL CCCCCCCCCCCEEEEECCEEEEEHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLWHRFEYFVGSFEMFSPKFKISLISSIVKSIGSIKLLPFNMLLFLLFSISVLSLKVLKN CCCHHHHHHHCCHHHCCCCHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHH AFPKGRHRSPNVQYSYNTSFKVSLDFFKGFIFSYTILSLYIL CCCCCCCCCCCEEEEECCEEEEEHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA