Definition Clostridium tetani E88 chromosome, complete genome.
Accession NC_004557
Length 2,799,251

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The map label for this gene is 28211818

Identifier: 28211818

GI number: 28211818

Start: 2335144

End: 2335761

Strand: Direct

Name: 28211818

Synonym: CTC02214

Alternate gene names: NA

Gene position: 2335144-2335761 (Clockwise)

Preceding gene: 28211801

Following gene: 28211822

Centisome position: 83.42

GC content: 25.4

Gene sequence:

>618_bases
ATGGATATCTTTAAAAAAAGAAAATTGTATTTTGTAATAGGAATTATGCTGTGCATTTCTATATTTAGTTTAACCTATTA
TATATCCGCAGTTAGAATAAAAAATAATTCTAATGATAATGGCAAATTACAAGTAAGTAATGTAGATAAAAATAATAATT
TAAATGTACAGGGAGAGAAAAAAAAGAAATTAAATGATGACGGCTCTATCGTACTAAAAACTAAATATACTAAAAGTGGA
GATCTATTAATTGATAAAACTGAAAAGTTAAAAGATATTTCTGATCTTAAAGAAAAAACAAAAGAAGAAATAGAATCAAA
ATTTAATAAAGATGGATATTCTATTGAGAGTTTTGATTCTGATAAAGCAGTTTTAATAAGGGAAATTGACAAATATTCTC
CAAATAAATATGTACTTGGAATAAAGGGAGAATATTTAGCTATCTATAAAACAGATAAATTTGGAAACATGTTTATAGAA
AATGAAGAAACAGATATAACAAAGAGAAAAATAGACCATCTAAAGGAACAAGACATACAACTTTTAACAAAAGGCGACAA
GTACTTTCAATGTGAAACAAAGGAAGAAGCCTTAGCACGTCTAGAAGACTATGAGTAA

Upstream 100 bases:

>100_bases
TATCCATTATAACTTTACCACTATAATATGGGTAATTCAAGAATAAAGATGTATATAACATTATTTAACTGTCAATAATA
TCCTATAGGAGAGTGATTAA

Downstream 100 bases:

>100_bases
AATCTTTATTATTATAAATTAAAACCACTTTCAATAGGGATACTATATATCCATATTGAAAGTGGTTTGATTATTTTAAT
TCTAACCTTCCCATTCCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MDIFKKRKLYFVIGIMLCISIFSLTYYISAVRIKNNSNDNGKLQVSNVDKNNNLNVQGEKKKKLNDDGSIVLKTKYTKSG
DLLIDKTEKLKDISDLKEKTKEEIESKFNKDGYSIESFDSDKAVLIREIDKYSPNKYVLGIKGEYLAIYKTDKFGNMFIE
NEETDITKRKIDHLKEQDIQLLTKGDKYFQCETKEEALARLEDYE

Sequences:

>Translated_205_residues
MDIFKKRKLYFVIGIMLCISIFSLTYYISAVRIKNNSNDNGKLQVSNVDKNNNLNVQGEKKKKLNDDGSIVLKTKYTKSG
DLLIDKTEKLKDISDLKEKTKEEIESKFNKDGYSIESFDSDKAVLIREIDKYSPNKYVLGIKGEYLAIYKTDKFGNMFIE
NEETDITKRKIDHLKEQDIQLLTKGDKYFQCETKEEALARLEDYE
>Mature_205_residues
MDIFKKRKLYFVIGIMLCISIFSLTYYISAVRIKNNSNDNGKLQVSNVDKNNNLNVQGEKKKKLNDDGSIVLKTKYTKSG
DLLIDKTEKLKDISDLKEKTKEEIESKFNKDGYSIESFDSDKAVLIREIDKYSPNKYVLGIKGEYLAIYKTDKFGNMFIE
NEETDITKRKIDHLKEQDIQLLTKGDKYFQCETKEEALARLEDYE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23860; Mature: 23860

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIFKKRKLYFVIGIMLCISIFSLTYYISAVRIKNNSNDNGKLQVSNVDKNNNLNVQGEK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCEEEEEECCCCCCCCCCCCH
KKKLNDDGSIVLKTKYTKSGDLLIDKTEKLKDISDLKEKTKEEIESKFNKDGYSIESFDS
HHCCCCCCCEEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCC
DKAVLIREIDKYSPNKYVLGIKGEYLAIYKTDKFGNMFIENEETDITKRKIDHLKEQDIQ
CCCEEEEEHHCCCCCEEEEEECCCEEEEEEECCCCCEEEECCCCHHHHHHHHHHHHHCHH
LLTKGDKYFQCETKEEALARLEDYE
EEECCCCEEEECCHHHHHHHHCCCC
>Mature Secondary Structure
MDIFKKRKLYFVIGIMLCISIFSLTYYISAVRIKNNSNDNGKLQVSNVDKNNNLNVQGEK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCEEEEEECCCCCCCCCCCCH
KKKLNDDGSIVLKTKYTKSGDLLIDKTEKLKDISDLKEKTKEEIESKFNKDGYSIESFDS
HHCCCCCCCEEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCC
DKAVLIREIDKYSPNKYVLGIKGEYLAIYKTDKFGNMFIENEETDITKRKIDHLKEQDIQ
CCCEEEEEHHCCCCCEEEEEECCCEEEEEEECCCCCEEEECCCCHHHHHHHHHHHHHCHH
LLTKGDKYFQCETKEEALARLEDYE
EEECCCCEEEECCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA