BacMap

Definition	Clostridium tetani E88 chromosome, complete genome.
Accession	NC_004557
Length	2,799,251

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The map label for this gene is yhcG [H]

Identifier: 28211612

GI number: 28211612

Start: 2113489

End: 2114181

Strand: Direct

Name: yhcG [H]

Synonym: CTC01987

Alternate gene names: 28211612

Gene position: 2113489-2114181 (Clockwise)

Preceding gene: 28211611

Following gene: 28211613

Centisome position: 75.5

GC content: 24.1

Gene sequence:

>693_bases
ATGGATTATATATTAGAATGTAATGATTTAGTTAAAAAGTATGGAAATAAAATTGTCTTAAATAATTTAAATCTTAAAAT
CCCAAAAGGAAAAATTATTGGGTTGCTTGGACCAAACGGTGTAGGTAAAACTACCTTAATAAAGGTTATAGCTTCACTAT
TAAATTATAATAGTGGTCAAATTACCATTGATGGAAAATCTCCCGGTGTTGATACTAAAAAAATAGTAGCCTACTTACCA
GATAGGGAATTTCTTTATCAATGGATGTCTATAGCTGAAGCTATTAATTTTTTTAAAAAATCTTTTGAAGATTTTGATGA
TGTAAAAGCATATTCAATGATAAATACTTTAAACTTAGATTCTAAACAGAAAATAAAATCTTTGTCCAAAGGTATGCAAG
AAAAGTTAAATATAAGTTTAACCTTTTCAAGAAAATCCAAACTTTTTATATTAGATGAACCACTAGCTGCTGTAGATGTA
GTAACAAGAGATAAAATAATAGAAATTATTCTCAAAAATTTTGATAAGAATAGTTCAATACTTATAAGTACACATTTGAT
AAATGATATAGAATATTTATTTAATGAGGTTGTTTTTATAAATGATGGTAAAACCATATTACATGGAGATGTGTTGAATT
TAAAAAATAAATATAAAAAATCTATTCAAGATTTATTTAAGGAGATAATATAA

Upstream 100 bases:

>100_bases
TAGTTATGTATGTATCTTTAACACTTGGATTTTTAGCTTCATATTTTATTACTGACAAATGTATTAAATATTATTCTAAG
TAATTTAATAAGGAGGCAAT

Downstream 100 bases:

>100_bases
ATGTATTTAAATTTATTTAAAATAGAAATTAGAAAACATTATATTTTTCTTGGAATTTGTATAATTATTAACTTAATTAC
AAGTTTTTTTGTATTAGTTG

Product: transporter

Products: taurine [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MDYILECNDLVKKYGNKIVLNNLNLKIPKGKIIGLLGPNGVGKTTLIKVIASLLNYNSGQITIDGKSPGVDTKKIVAYLP
DREFLYQWMSIAEAINFFKKSFEDFDDVKAYSMINTLNLDSKQKIKSLSKGMQEKLNISLTFSRKSKLFILDEPLAAVDV
VTRDKIIEIILKNFDKNSSILISTHLINDIEYLFNEVVFINDGKTILHGDVLNLKNKYKKSIQDLFKEII

Sequences:

>Translated_230_residues
MDYILECNDLVKKYGNKIVLNNLNLKIPKGKIIGLLGPNGVGKTTLIKVIASLLNYNSGQITIDGKSPGVDTKKIVAYLP
DREFLYQWMSIAEAINFFKKSFEDFDDVKAYSMINTLNLDSKQKIKSLSKGMQEKLNISLTFSRKSKLFILDEPLAAVDV
VTRDKIIEIILKNFDKNSSILISTHLINDIEYLFNEVVFINDGKTILHGDVLNLKNKYKKSIQDLFKEII
>Mature_230_residues
MDYILECNDLVKKYGNKIVLNNLNLKIPKGKIIGLLGPNGVGKTTLIKVIASLLNYNSGQITIDGKSPGVDTKKIVAYLP
DREFLYQWMSIAEAINFFKKSFEDFDDVKAYSMINTLNLDSKQKIKSLSKGMQEKLNISLTFSRKSKLFILDEPLAAVDV
VTRDKIIEIILKNFDKNSSILISTHLINDIEYLFNEVVFINDGKTILHGDVLNLKNKYKKSIQDLFKEII

Specific function: Part Of A Binding-Protein-Dependent Transport System For Taurine. Probably Responsible For Energy Coupling To The Transport System. [C]

COG id: COG1131

COG function: function code V; ABC-type multidrug transport system, ATPase component

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI27881501, Length=224, Percent_Identity=31.25, Blast_Score=103, Evalue=1e-22,
Organism=Homo sapiens, GI30795238, Length=224, Percent_Identity=31.25, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI21536376, Length=221, Percent_Identity=32.579185520362, Blast_Score=101, Evalue=5e-22,
Organism=Homo sapiens, GI45446740, Length=216, Percent_Identity=31.0185185185185, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI47078218, Length=216, Percent_Identity=31.0185185185185, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI31657092, Length=225, Percent_Identity=26.6666666666667, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI105990541, Length=205, Percent_Identity=28.2926829268293, Blast_Score=93, Evalue=2e-19,
Organism=Homo sapiens, GI116734710, Length=220, Percent_Identity=30, Blast_Score=92, Evalue=5e-19,
Organism=Homo sapiens, GI6005701, Length=214, Percent_Identity=28.0373831775701, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI27477115, Length=210, Percent_Identity=27.1428571428571, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI27436953, Length=231, Percent_Identity=25.1082251082251, Blast_Score=85, Evalue=6e-17,
Organism=Homo sapiens, GI150417984, Length=211, Percent_Identity=28.436018957346, Blast_Score=84, Evalue=8e-17,
Organism=Homo sapiens, GI153792144, Length=215, Percent_Identity=25.5813953488372, Blast_Score=84, Evalue=8e-17,
Organism=Homo sapiens, GI27262624, Length=228, Percent_Identity=25.8771929824561, Blast_Score=77, Evalue=9e-15,
Organism=Homo sapiens, GI27262626, Length=228, Percent_Identity=25.8771929824561, Blast_Score=77, Evalue=9e-15,
Organism=Homo sapiens, GI21729876, Length=225, Percent_Identity=22.2222222222222, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI21729873, Length=225, Percent_Identity=22.2222222222222, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI15149474, Length=225, Percent_Identity=22.2222222222222, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI9955968, Length=205, Percent_Identity=23.4146341463415, Blast_Score=65, Evalue=6e-11,
Organism=Homo sapiens, GI9955966, Length=205, Percent_Identity=23.4146341463415, Blast_Score=65, Evalue=6e-11,
Organism=Homo sapiens, GI45243524, Length=205, Percent_Identity=23.4146341463415, Blast_Score=65, Evalue=6e-11,
Organism=Escherichia coli, GI1786563, Length=225, Percent_Identity=28, Blast_Score=103, Evalue=7e-24,
Organism=Escherichia coli, GI48994943, Length=215, Percent_Identity=27.906976744186, Blast_Score=98, Evalue=6e-22,
Organism=Escherichia coli, GI87081782, Length=224, Percent_Identity=25.8928571428571, Blast_Score=95, Evalue=3e-21,
Organism=Escherichia coli, GI1786319, Length=216, Percent_Identity=29.6296296296296, Blast_Score=94, Evalue=6e-21,
Organism=Escherichia coli, GI1787029, Length=239, Percent_Identity=23.8493723849372, Blast_Score=86, Evalue=1e-18,
Organism=Escherichia coli, GI87081709, Length=238, Percent_Identity=28.9915966386555, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI87081791, Length=220, Percent_Identity=25.4545454545455, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1787164, Length=198, Percent_Identity=25.2525252525253, Blast_Score=84, Evalue=7e-18,
Organism=Escherichia coli, GI1789593, Length=217, Percent_Identity=25.3456221198157, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1788450, Length=226, Percent_Identity=24.3362831858407, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI2367384, Length=165, Percent_Identity=26.6666666666667, Blast_Score=78, Evalue=4e-16,
Organism=Escherichia coli, GI1788761, Length=219, Percent_Identity=25.1141552511416, Blast_Score=78, Evalue=4e-16,
Organism=Escherichia coli, GI1786253, Length=194, Percent_Identity=23.1958762886598, Blast_Score=77, Evalue=7e-16,
Organism=Escherichia coli, GI1790739, Length=219, Percent_Identity=21.9178082191781, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1788225, Length=223, Percent_Identity=22.8699551569507, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1786345, Length=208, Percent_Identity=25.4807692307692, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1789586, Length=240, Percent_Identity=20.8333333333333, Blast_Score=74, Evalue=7e-15,
Organism=Escherichia coli, GI1790190, Length=228, Percent_Identity=27.6315789473684, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI1790467, Length=220, Percent_Identity=25.9090909090909, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1789991, Length=221, Percent_Identity=24.4343891402715, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1789672, Length=207, Percent_Identity=22.2222222222222, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1788472, Length=218, Percent_Identity=24.7706422018349, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1787089, Length=214, Percent_Identity=25.7009345794392, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787792, Length=203, Percent_Identity=26.6009852216749, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1788165, Length=200, Percent_Identity=27, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI87082268, Length=229, Percent_Identity=25.764192139738, Blast_Score=67, Evalue=7e-13,
Organism=Escherichia coli, GI1789864, Length=242, Percent_Identity=22.7272727272727, Blast_Score=67, Evalue=8e-13,
Organism=Escherichia coli, GI1787370, Length=204, Percent_Identity=26.9607843137255, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1788897, Length=212, Percent_Identity=22.1698113207547, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1790525, Length=223, Percent_Identity=25.1121076233184, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1786872, Length=207, Percent_Identity=23.6714975845411, Blast_Score=62, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI115533608, Length=204, Percent_Identity=28.921568627451, Blast_Score=87, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI17510237, Length=225, Percent_Identity=26.2222222222222, Blast_Score=86, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI71983523, Length=208, Percent_Identity=29.3269230769231, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71983516, Length=208, Percent_Identity=29.3269230769231, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71983510, Length=208, Percent_Identity=29.3269230769231, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71988343, Length=206, Percent_Identity=29.6116504854369, Blast_Score=80, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI17565586, Length=212, Percent_Identity=26.4150943396226, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17511077, Length=223, Percent_Identity=24.2152466367713, Blast_Score=64, Evalue=4e-11,
Organism=Drosophila melanogaster, GI28574150, Length=220, Percent_Identity=27.2727272727273, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI281362751, Length=193, Percent_Identity=33.6787564766839, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI116007328, Length=220, Percent_Identity=27.2727272727273, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24650853, Length=191, Percent_Identity=34.0314136125654, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24650855, Length=191, Percent_Identity=34.0314136125654, Blast_Score=95, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24582014, Length=237, Percent_Identity=29.957805907173, Blast_Score=94, Evalue=9e-20,
Organism=Drosophila melanogaster, GI24582012, Length=237, Percent_Identity=29.957805907173, Blast_Score=94, Evalue=9e-20,
Organism=Drosophila melanogaster, GI24666092, Length=222, Percent_Identity=28.8288288288288, Blast_Score=91, Evalue=5e-19,
Organism=Drosophila melanogaster, GI85725262, Length=231, Percent_Identity=30.7359307359307, Blast_Score=91, Evalue=9e-19,
Organism=Drosophila melanogaster, GI221512771, Length=221, Percent_Identity=26.2443438914027, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24643674, Length=240, Percent_Identity=26.25, Blast_Score=85, Evalue=5e-17,
Organism=Drosophila melanogaster, GI221500365, Length=203, Percent_Identity=26.1083743842365, Blast_Score=82, Evalue=2e-16,
Organism=Drosophila melanogaster, GI116007184, Length=203, Percent_Identity=26.1083743842365, Blast_Score=82, Evalue=2e-16,
Organism=Drosophila melanogaster, GI28573571, Length=227, Percent_Identity=25.9911894273128, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI28573573, Length=227, Percent_Identity=25.9911894273128, Blast_Score=78, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24648314, Length=226, Percent_Identity=26.1061946902655, Blast_Score=78, Evalue=4e-15,
Organism=Drosophila melanogaster, GI28574744, Length=209, Percent_Identity=23.9234449760766, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI19920532, Length=216, Percent_Identity=23.1481481481481, Blast_Score=64, Evalue=9e-11,
Organism=Drosophila melanogaster, GI24580930, Length=216, Percent_Identity=23.1481481481481, Blast_Score=64, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 26111; Mature: 26111

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYILECNDLVKKYGNKIVLNNLNLKIPKGKIIGLLGPNGVGKTTLIKVIASLLNYNSGQ
CCCEECHHHHHHHHCCEEEEECCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCE
ITIDGKSPGVDTKKIVAYLPDREFLYQWMSIAEAINFFKKSFEDFDDVKAYSMINTLNLD
EEECCCCCCCCHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SKQKIKSLSKGMQEKLNISLTFSRKSKLFILDEPLAAVDVVTRDKIIEIILKNFDKNSSI
HHHHHHHHHHHHHHHCCEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCE
LISTHLINDIEYLFNEVVFINDGKTILHGDVLNLKNKYKKSIQDLFKEII
EEEHHHHHHHHHHHHCEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MDYILECNDLVKKYGNKIVLNNLNLKIPKGKIIGLLGPNGVGKTTLIKVIASLLNYNSGQ
CCCEECHHHHHHHHCCEEEEECCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCE
ITIDGKSPGVDTKKIVAYLPDREFLYQWMSIAEAINFFKKSFEDFDDVKAYSMINTLNLD
EEECCCCCCCCHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SKQKIKSLSKGMQEKLNISLTFSRKSKLFILDEPLAAVDVVTRDKIIEIILKNFDKNSSI
HHHHHHHHHHHHHHHCCEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCE
LISTHLINDIEYLFNEVVFINDGKTILHGDVLNLKNKYKKSIQDLFKEII
EEEHHHHHHHHHHHHCEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: taurine [Periplasm]; ATP; H2O [C]

Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377 [H]