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The map label for this gene is sinR

Identifier: 28211495

GI number: 28211495

Start: 1976494

End: 1977009

Strand: Direct

Name: sinR

Synonym: CTC01858

Alternate gene names: NA

Gene position: 1976494-1977009 (Clockwise)

Preceding gene: 28211493

Following gene: 28211496

Centisome position: 70.61

GC content: 27.91

Gene sequence:

>516_bases
TTGACTTATATTCCAGTAGGATATAATATATTCTATAAGAATACACTTATAGAATATGTTGTTTACAAGGGAGATTTTAA
AATGTTTGATGCAAATATAAAAAGAATTAGGGAACAAAAAGGGTTGGGAGTAAATGAGCTATCTAGGATTAGTGGAGTAA
ACGCTAGTTATATAAGTGCATTAGAACGAGGTGAAAAACAAAATCCAACTATTACAATATTGAAAAAATTAGCTAATGCA
TTAGAAGTTACAATAGATGAATTAATGAAATCTGAACCAATTAATTATGATAAATTAGCTGATTGGGATGATAAACACCA
TTGTTCATTTAAAGAAGACTATTTTGATGGAGAATTTAAAACTGCTGAATCTGCTATGCAATTCATACTAAATCAACCAG
TTATTATGGGATTTGGTGGTTTTGACGTAAATAAAATGAGTGATGATGAAATTGTTGAATTTGGAAATGACTTATTAGGA
GTATTGAAGACTTTAGGTTCTAAATATAATAAATAG

Upstream 100 bases:

>100_bases
TTTATGCATGCACATACAATTTCTATTTTCGTTATCTGCAGCTTAATCTTTAATTTATATATTATTTTCAAGTTTTATGT
CTAATTTTCCAATTTAACTA

Downstream 100 bases:

>100_bases
TTATTAACTATAAACAAAAATTAATATACAATTGCGGGGGAAATTTATGAGACAAGATGAAATTATAAAATTAGCAAAAT
CTCTAAAAAAACAATATACC

Product: putative transcriptional regulator sinR

Products: NA

Alternate protein names: Transcriptional Regulator SinR; XRE Family Transcriptional Regulator

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MTYIPVGYNIFYKNTLIEYVVYKGDFKMFDANIKRIREQKGLGVNELSRISGVNASYISALERGEKQNPTITILKKLANA
LEVTIDELMKSEPINYDKLADWDDKHHCSFKEDYFDGEFKTAESAMQFILNQPVIMGFGGFDVNKMSDDEIVEFGNDLLG
VLKTLGSKYNK

Sequences:

>Translated_171_residues
MTYIPVGYNIFYKNTLIEYVVYKGDFKMFDANIKRIREQKGLGVNELSRISGVNASYISALERGEKQNPTITILKKLANA
LEVTIDELMKSEPINYDKLADWDDKHHCSFKEDYFDGEFKTAESAMQFILNQPVIMGFGGFDVNKMSDDEIVEFGNDLLG
VLKTLGSKYNK
>Mature_170_residues
TYIPVGYNIFYKNTLIEYVVYKGDFKMFDANIKRIREQKGLGVNELSRISGVNASYISALERGEKQNPTITILKKLANAL
EVTIDELMKSEPINYDKLADWDDKHHCSFKEDYFDGEFKTAESAMQFILNQPVIMGFGGFDVNKMSDDEIVEFGNDLLGV
LKTLGSKYNK

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19520; Mature: 19388

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYIPVGYNIFYKNTLIEYVVYKGDFKMFDANIKRIREQKGLGVNELSRISGVNASYISA
CCEECCCCEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHH
LERGEKQNPTITILKKLANALEVTIDELMKSEPINYDKLADWDDKHHCSFKEDYFDGEFK
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
TAESAMQFILNQPVIMGFGGFDVNKMSDDEIVEFGNDLLGVLKTLGSKYNK
HHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TYIPVGYNIFYKNTLIEYVVYKGDFKMFDANIKRIREQKGLGVNELSRISGVNASYISA
CEECCCCEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHH
LERGEKQNPTITILKKLANALEVTIDELMKSEPINYDKLADWDDKHHCSFKEDYFDGEFK
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
TAESAMQFILNQPVIMGFGGFDVNKMSDDEIVEFGNDLLGVLKTLGSKYNK
HHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA