| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28211453
Identifier: 28211453
GI number: 28211453
Start: 1922021
End: 1922380
Strand: Direct
Name: 28211453
Synonym: CTC01810
Alternate gene names: NA
Gene position: 1922021-1922380 (Clockwise)
Preceding gene: 28211443
Following gene: 28211455
Centisome position: 68.66
GC content: 33.61
Gene sequence:
>360_bases ATGGATAAAGGAACAGAAGAAAATAGATCTAGTATAGGACATTATGTTATAAGGCTTTTATTGACAGCTCTTGTTTTAGC TGTAACTTCTTTTTTAACTCCTGGTTTTTCAATAGTAGGACTTTGGTCAATGCTTTTAGCAGCTGTTGTTATAACCATAG TAGATGCCATTGTGGAGAGTTTCTTTAAAGCGGATGCTTCACCCTTTGGTAAAGGATTTAAAGGATTTGTCATTGCAGCT ATAATAATATATGCAACTCAATTTGTTGTTCCTAATATGAATGTTTCTTGGCTAGGTGCTATTTTAGCAGCGTTAGTAGT TGGAATAATAGATGCTTTTTTACCTGGAAGAGTTATGTAA
Upstream 100 bases:
>100_bases TTTTATAAACGGTAATGAAGCTTTAGAACTTGTAGAAAATGATGAAGAACTTAACAAAATTAAGTCTCTTTCAAAAATAA TTTAAAAGGAGGACTCATAT
Downstream 100 bases:
>100_bases AAAACACTCAAAAGGCTATGGTTTTAAAAAACCATAGCCTTTGCTTATAAAACTTCTTTAAACTGCATATTATATAAGGA TTCATATATACCTTTTTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MDKGTEENRSSIGHYVIRLLLTALVLAVTSFLTPGFSIVGLWSMLLAAVVITIVDAIVESFFKADASPFGKGFKGFVIAA IIIYATQFVVPNMNVSWLGAILAALVVGIIDAFLPGRVM
Sequences:
>Translated_119_residues MDKGTEENRSSIGHYVIRLLLTALVLAVTSFLTPGFSIVGLWSMLLAAVVITIVDAIVESFFKADASPFGKGFKGFVIAA IIIYATQFVVPNMNVSWLGAILAALVVGIIDAFLPGRVM >Mature_119_residues MDKGTEENRSSIGHYVIRLLLTALVLAVTSFLTPGFSIVGLWSMLLAAVVITIVDAIVESFFKADASPFGKGFKGFVIAA IIIYATQFVVPNMNVSWLGAILAALVVGIIDAFLPGRVM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12689; Mature: 12689
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKGTEENRSSIGHYVIRLLLTALVLAVTSFLTPGFSIVGLWSMLLAAVVITIVDAIVES CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH FFKADASPFGKGFKGFVIAAIIIYATQFVVPNMNVSWLGAILAALVVGIIDAFLPGRVM HHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MDKGTEENRSSIGHYVIRLLLTALVLAVTSFLTPGFSIVGLWSMLLAAVVITIVDAIVES CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH FFKADASPFGKGFKGFVIAAIIIYATQFVVPNMNVSWLGAILAALVVGIIDAFLPGRVM HHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA