Definition Clostridium tetani E88 chromosome, complete genome.
Accession NC_004557
Length 2,799,251

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The map label for this gene is 28211453

Identifier: 28211453

GI number: 28211453

Start: 1922021

End: 1922380

Strand: Direct

Name: 28211453

Synonym: CTC01810

Alternate gene names: NA

Gene position: 1922021-1922380 (Clockwise)

Preceding gene: 28211443

Following gene: 28211455

Centisome position: 68.66

GC content: 33.61

Gene sequence:

>360_bases
ATGGATAAAGGAACAGAAGAAAATAGATCTAGTATAGGACATTATGTTATAAGGCTTTTATTGACAGCTCTTGTTTTAGC
TGTAACTTCTTTTTTAACTCCTGGTTTTTCAATAGTAGGACTTTGGTCAATGCTTTTAGCAGCTGTTGTTATAACCATAG
TAGATGCCATTGTGGAGAGTTTCTTTAAAGCGGATGCTTCACCCTTTGGTAAAGGATTTAAAGGATTTGTCATTGCAGCT
ATAATAATATATGCAACTCAATTTGTTGTTCCTAATATGAATGTTTCTTGGCTAGGTGCTATTTTAGCAGCGTTAGTAGT
TGGAATAATAGATGCTTTTTTACCTGGAAGAGTTATGTAA

Upstream 100 bases:

>100_bases
TTTTATAAACGGTAATGAAGCTTTAGAACTTGTAGAAAATGATGAAGAACTTAACAAAATTAAGTCTCTTTCAAAAATAA
TTTAAAAGGAGGACTCATAT

Downstream 100 bases:

>100_bases
AAAACACTCAAAAGGCTATGGTTTTAAAAAACCATAGCCTTTGCTTATAAAACTTCTTTAAACTGCATATTATATAAGGA
TTCATATATACCTTTTTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MDKGTEENRSSIGHYVIRLLLTALVLAVTSFLTPGFSIVGLWSMLLAAVVITIVDAIVESFFKADASPFGKGFKGFVIAA
IIIYATQFVVPNMNVSWLGAILAALVVGIIDAFLPGRVM

Sequences:

>Translated_119_residues
MDKGTEENRSSIGHYVIRLLLTALVLAVTSFLTPGFSIVGLWSMLLAAVVITIVDAIVESFFKADASPFGKGFKGFVIAA
IIIYATQFVVPNMNVSWLGAILAALVVGIIDAFLPGRVM
>Mature_119_residues
MDKGTEENRSSIGHYVIRLLLTALVLAVTSFLTPGFSIVGLWSMLLAAVVITIVDAIVESFFKADASPFGKGFKGFVIAA
IIIYATQFVVPNMNVSWLGAILAALVVGIIDAFLPGRVM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12689; Mature: 12689

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKGTEENRSSIGHYVIRLLLTALVLAVTSFLTPGFSIVGLWSMLLAAVVITIVDAIVES
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FFKADASPFGKGFKGFVIAAIIIYATQFVVPNMNVSWLGAILAALVVGIIDAFLPGRVM
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDKGTEENRSSIGHYVIRLLLTALVLAVTSFLTPGFSIVGLWSMLLAAVVITIVDAIVES
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FFKADASPFGKGFKGFVIAAIIIYATQFVVPNMNVSWLGAILAALVVGIIDAFLPGRVM
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA